RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, human

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-209	ENST00000451859	KLHL24	Q6TFL4	600 aa		7.61	□□□□□ -1.19
RFX3-209	ENST00000451859	B3GLCT	Q6Y288	498 aa		7.61	□□□□□ -1.19
RFX3-209	ENST00000451859	P2RY8	Q86VZ1	359 aa		7.61	□□□□□ -1.19
RFX3-209	ENST00000451859	KRT73	Q86Y46	540 aa		7.61	□□□□□ -1.19
RFX3-209	ENST00000451859	ZIC4	Q8N9L1	334 aa		7.61	□□□□□ -1.19
RFX3-209	ENST00000451859	WDR31	Q8NA23	367 aa		7.61	□□□□□ -1.19
RFX3-209	ENST00000451859	CKAP2	Q8WWK9	683 aa		7.61	□□□□□ -1.19
RFX3-209	ENST00000451859	HTRA1	Q92743	480 aa		7.61	□□□□□ -1.19
RFX3-209	ENST00000451859	TRMT61A	Q96FX7	289 aa	Known RBP	7.61	□□□□□ -1.19
RFX3-209	ENST00000451859	MAGEB18	Q96M61	343 aa		7.61	□□□□□ -1.19
RFX3-209	ENST00000451859	HS6ST2	Q96MM7	605 aa		7.61	□□□□□ -1.19
RFX3-209	ENST00000451859	CPPED1	Q9BRF8	314 aa	Predicted RBP	7.61	□□□□□ -1.19
RFX3-209	ENST00000451859	RSPO3	Q9BXY4	272 aa	Predicted RBP	7.61	□□□□□ -1.19
RFX3-209	ENST00000451859	SLC52A3	Q9NQ40	469 aa		7.61	□□□□□ -1.19
RFX3-209	ENST00000451859	FAIM	Q9NVQ4	179 aa		7.61	□□□□□ -1.19
RFX3-209	ENST00000451859	ATP23	Q9Y6H3	246 aa		7.61	□□□□□ -1.19
RFX3-209	ENST00000451859	ANK3	Q12955	4377 aa	Known RBP	7.61	□□□□□ -1.19
RFX3-209	ENST00000451859	TRBV5-3	A0A0A0MS03	114 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	FAM171A2	A8MVW0	826 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859		E7EQL1	145 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	ZNF587B	E7ETH6	402 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859		M0R082	166 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	PDLIM1	O00151	329 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	ANGPT2	O15123	496 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	UPK3A	O75631	287 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	LGI1	O95970	557 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	CD8A	P01732	235 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	IGHV4-39	P01824	125 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	OPN1SW	P03999	348 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	ETS2	P15036	469 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	SLC6A2	P23975	617 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	MPG	P29372	298 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	PRKAR1B	P31321	381 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	GATA4	P43694	442 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	MRPL19	P49406	292 aa	Known RBP	7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	ATP4B	P51164	291 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	CLDN17	P56750	224 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	TUBA1B	P68363	451 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	TUBA4A	P68366	448 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	TGFBR3	Q03167	851 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	EGR4	Q05215	589 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	TNK1	Q13470	666 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	OR7E24	Q6IFN5	339 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	CREB3L2	Q70SY1	520 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	TUBA1A	Q71U36	451 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	ARMC8	Q8IUR7	673 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	DEPDC4	Q8N2C3	294 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	SMYD1	Q8NB12	490 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	ZNF417	Q8TAU3	575 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	STK35	Q8TDR2	534 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	TMEM45B	Q96B21	275 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	KTI12	Q96EK9	354 aa	Predicted RBP	7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	MUS81	Q96NY9	551 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	ZNF587	Q96SQ5	575 aa	Predicted RBP	7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	TRAF4	Q9BUZ4	470 aa	Predicted RBP	7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	PTDSS2	Q9BVG9	487 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	SPATA5L1	Q9BVQ7	753 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	SF3B5	Q9BWJ5	86 aa	Known RBP	7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	PIF1	Q9H611	641 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	SLC17A5	Q9NRA2	495 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	SELENON	Q9NZV5	590 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	LEF1	Q9UJU2	399 aa	Predicted RBP	7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	CORO2B	Q9UQ03	480 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	ANGPT4	Q9Y264	503 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	AMDHD2	Q9Y303	409 aa		7.6	□□□□□ -1.19
RFX3-209	ENST00000451859	JMJD1C	Q15652	2540 aa		7.59	□□□□□ -1.19
RFX3-209	ENST00000451859		A0A096LPE4	126 aa		7.59	□□□□□ -1.19
RFX3-209	ENST00000451859	SCO2	A0A1W2PP80	73 aa		7.59	□□□□□ -1.19
RFX3-209	ENST00000451859		A0A1W2PPZ6	126 aa		7.59	□□□□□ -1.19
RFX3-209	ENST00000451859	INAFM1	C9JVW0	142 aa		7.59	□□□□□ -1.19
RFX3-209	ENST00000451859	FTCDNL1	E5RQL4	147 aa		7.59	□□□□□ -1.19
RFX3-209	ENST00000451859	ATP6V1G2-DDX39B	F2Z307	99 aa		7.59	□□□□□ -1.19
RFX3-209	ENST00000451859		M0R3H8	397 aa		7.59	□□□□□ -1.19
RFX3-209	ENST00000451859	OVOL3	O00110	214 aa		7.59	□□□□□ -1.19
RFX3-209	ENST00000451859	SSX4	O60224	188 aa		7.59	□□□□□ -1.19
RFX3-209	ENST00000451859	EDF1	O60869	148 aa	Known RBP	7.59	□□□□□ -1.19
RFX3-209	ENST00000451859	NPIPB7	O75200	414 aa		7.59	□□□□□ -1.19
RFX3-209	ENST00000451859	SERPINB7	O75635	380 aa		7.59	□□□□□ -1.19
RFX3-209	ENST00000451859	SERPINI2	O75830	405 aa		7.59	□□□□□ -1.19
RFX3-209	ENST00000451859	SASH3	O75995	380 aa		7.59	□□□□□ -1.19
RFX3-209	ENST00000451859	SEC14L2	O76054	403 aa		7.59	□□□□□ -1.19
RFX3-209	ENST00000451859	NQO1	P15559	274 aa	Known RBP	7.59	□□□□□ -1.19
RFX3-209	ENST00000451859	PAX1	P15863	534 aa		7.59	□□□□□ -1.19
RFX3-209	ENST00000451859	H2AFX	P16104	143 aa	Predicted RBP	7.59	□□□□□ -1.19
RFX3-209	ENST00000451859	ZNF43	P17038	809 aa		7.59	□□□□□ -1.19
RFX3-209	ENST00000451859	GRPR	P30550	384 aa		7.59	□□□□□ -1.19
RFX3-209	ENST00000451859	FABP6	P51161	128 aa		7.59	□□□□□ -1.19
RFX3-209	ENST00000451859	P2RY4	P51582	365 aa		7.59	□□□□□ -1.19
RFX3-209	ENST00000451859	PRPS1	P60891	318 aa		7.59	□□□□□ -1.19
RFX3-209	ENST00000451859	DMTN	Q08495	405 aa		7.59	□□□□□ -1.19
RFX3-209	ENST00000451859	C1D	Q13901	141 aa	Known RBP	7.59	□□□□□ -1.19
RFX3-209	ENST00000451859	NFYC	Q13952	458 aa		7.59	□□□□□ -1.19
RFX3-209	ENST00000451859	OR1Q1	Q15612	314 aa		7.59	□□□□□ -1.19
RFX3-209	ENST00000451859	TBRG1	Q3YBR2	411 aa		7.59	□□□□□ -1.19
RFX3-209	ENST00000451859	AGAP6	Q5VW22	663 aa		7.59	□□□□□ -1.19
RFX3-209	ENST00000451859	CARD17	Q5XLA6	110 aa		7.59	□□□□□ -1.19
RFX3-209	ENST00000451859	DLEU7	Q6UYE1	221 aa		7.59	□□□□□ -1.19
RFX3-209	ENST00000451859	LINGO2	Q7L985	606 aa		7.59	□□□□□ -1.19
RFX3-209	ENST00000451859	SSX8	Q7RTT4	187 aa		7.59	□□□□□ -1.19
RFX3-209	ENST00000451859	EPHX4	Q8IUS5	362 aa		7.59	□□□□□ -1.19

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms