RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 GRPRP30550 384 aa12.35□□□□□ -0.43
RTFDC1-204ENST00000449062 SELENOPP49908 381 aa12.35□□□□□ -0.43
RTFDC1-204ENST00000449062 BSPH1Q075Z2 132 aa12.35□□□□□ -0.43
RTFDC1-204ENST00000449062 LGALS3BPQ08380 585 aa12.35□□□□□ -0.43
RTFDC1-204ENST00000449062 MMEL1Q495T6 779 aa12.35□□□□□ -0.43
RTFDC1-204ENST00000449062 ENTPD8Q5MY95 495 aa12.35□□□□□ -0.43
RTFDC1-204ENST00000449062 OR7E24Q6IFN5 339 aa12.35□□□□□ -0.43
RTFDC1-204ENST00000449062 GPAT4Q86UL3 456 aa12.35□□□□□ -0.43
RTFDC1-204ENST00000449062 RANBP3LQ86VV4 465 aaPredicted RBP12.35□□□□□ -0.43
RTFDC1-204ENST00000449062 LRRC75A-AS1Q8N1F1 130 aa12.35□□□□□ -0.43
RTFDC1-204ENST00000449062 POMGNT2Q8NAT1 580 aa12.35□□□□□ -0.43
RTFDC1-204ENST00000449062 PCYOX1LQ8NBM8 494 aa12.35□□□□□ -0.43
RTFDC1-204ENST00000449062 ADPRHL1Q8NDY3 354 aa12.35□□□□□ -0.43
RTFDC1-204ENST00000449062 WFDC11Q8NEX6 87 aa12.35□□□□□ -0.43
RTFDC1-204ENST00000449062 ZNF417Q8TAU3 575 aa12.35□□□□□ -0.43
RTFDC1-204ENST00000449062 AKAP1Q92667 903 aaKnown RBP eCLIP12.35□□□□□ -0.43
RTFDC1-204ENST00000449062 NEUROG1Q92886 237 aa12.35□□□□□ -0.43
RTFDC1-204ENST00000449062 RCN3Q96D15 328 aa12.35□□□□□ -0.43
RTFDC1-204ENST00000449062 MUCL1Q96DR8 90 aa12.35□□□□□ -0.43
RTFDC1-204ENST00000449062 MOGAT1Q96PD6 335 aa12.35□□□□□ -0.43
RTFDC1-204ENST00000449062 ZNF587Q96SQ5 575 aaPredicted RBP12.35□□□□□ -0.43
RTFDC1-204ENST00000449062 PRSS27Q9BQR3 290 aa12.35□□□□□ -0.43
RTFDC1-204ENST00000449062 ZNF426Q9BUY5 554 aa12.35□□□□□ -0.43
RTFDC1-204ENST00000449062 SLCO5A1Q9H2Y9 848 aa12.35□□□□□ -0.43
RTFDC1-204ENST00000449062 ESRP2Q9H6T0 727 aaKnown RBP12.35□□□□□ -0.43
RTFDC1-204ENST00000449062 ZNF701Q9NV72 531 aaPredicted RBP12.35□□□□□ -0.43
RTFDC1-204ENST00000449062 GID8Q9NWU2 228 aa12.35□□□□□ -0.43
RTFDC1-204ENST00000449062 GMPR2Q9P2T1 348 aaKnown RBP12.35□□□□□ -0.43
RTFDC1-204ENST00000449062 RNF115Q9Y4L5 304 aa12.35□□□□□ -0.43
RTFDC1-204ENST00000449062 NAV3Q8IVL0 2385 aa12.34□□□□□ -0.43
RTFDC1-204ENST00000449062 NSD1Q96L73 2696 aaPredicted RBP12.34□□□□□ -0.43
RTFDC1-204ENST00000449062 CIB4A0PJX0 185 aa12.34□□□□□ -0.43
RTFDC1-204ENST00000449062 CCT8L1PA6NM43 557 aa12.34□□□□□ -0.43
RTFDC1-204ENST00000449062 SHISA9B4DS77 424 aa12.34□□□□□ -0.43
RTFDC1-204ENST00000449062 LRRN3E7EW58 273 aa12.34□□□□□ -0.43
RTFDC1-204ENST00000449062 AIM2O14862 343 aa12.34□□□□□ -0.43
RTFDC1-204ENST00000449062 CCDC22O60826 627 aa12.34□□□□□ -0.43
RTFDC1-204ENST00000449062 UPK3AO75631 287 aa12.34□□□□□ -0.43
RTFDC1-204ENST00000449062 CD3EP07766 207 aa12.34□□□□□ -0.43
RTFDC1-204ENST00000449062 DRD4P21917 467 aa12.34□□□□□ -0.43
RTFDC1-204ENST00000449062 KDELR2P33947 212 aa12.34□□□□□ -0.43
RTFDC1-204ENST00000449062 SLC25A3Q00325 362 aa12.34□□□□□ -0.43
RTFDC1-204ENST00000449062 FOXD4Q12950 439 aaPredicted RBP12.34□□□□□ -0.43
RTFDC1-204ENST00000449062 STK11Q15831 433 aa12.34□□□□□ -0.43
RTFDC1-204ENST00000449062 C1QTNF12Q5T7M4 302 aa12.34□□□□□ -0.43
RTFDC1-204ENST00000449062 ERICH5Q6P6B1 374 aa12.34□□□□□ -0.43
RTFDC1-204ENST00000449062 WDFY1Q8IWB7 410 aa12.34□□□□□ -0.43
RTFDC1-204ENST00000449062 C1orf162Q8NEQ5 155 aaPredicted RBP12.34□□□□□ -0.43
RTFDC1-204ENST00000449062 ADAMTS16Q8TE57 1224 aa12.34□□□□□ -0.43
RTFDC1-204ENST00000449062 ELAC2Q9BQ52 826 aaKnown RBP12.34□□□□□ -0.43
RTFDC1-204ENST00000449062 LINC00470Q9BZP3 86 aa12.34□□□□□ -0.43
RTFDC1-204ENST00000449062 SLC17A5Q9NRA2 495 aa12.34□□□□□ -0.43
RTFDC1-204ENST00000449062 UPB1Q9UBR1 384 aa12.34□□□□□ -0.43
RTFDC1-204ENST00000449062 SLC13A4Q9UKG4 626 aa12.34□□□□□ -0.43
RTFDC1-204ENST00000449062 RCE1Q9Y256 329 aa12.34□□□□□ -0.43
RTFDC1-204ENST00000449062 A0A1W2PR80 420 aa12.33□□□□□ -0.44
RTFDC1-204ENST00000449062 TRAPPC13A5PLN9 417 aa12.33□□□□□ -0.44
RTFDC1-204ENST00000449062 OR6C65A6NJZ3 312 aa12.33□□□□□ -0.44
RTFDC1-204ENST00000449062 RPL36A-HNRNPH2H7BZ11 118 aa12.33□□□□□ -0.44
RTFDC1-204ENST00000449062 OVOL3O00110 214 aa12.33□□□□□ -0.44
RTFDC1-204ENST00000449062 PLPP3O14495 311 aa12.33□□□□□ -0.44
RTFDC1-204ENST00000449062 TRAF3IP2O43734 574 aaPredicted RBP12.33□□□□□ -0.44
RTFDC1-204ENST00000449062 CHP2O43745 196 aa12.33□□□□□ -0.44
RTFDC1-204ENST00000449062 HLA-DOBP13765 273 aa12.33□□□□□ -0.44
RTFDC1-204ENST00000449062 CD99P14209 185 aa12.33□□□□□ -0.44
RTFDC1-204ENST00000449062 NKX6-1P78426 367 aaPredicted RBP12.33□□□□□ -0.44
RTFDC1-204ENST00000449062 MFSD13AQ14CX5 517 aa12.33□□□□□ -0.44
RTFDC1-204ENST00000449062 ZNF672Q499Z4 452 aaPredicted RBP12.33□□□□□ -0.44
RTFDC1-204ENST00000449062 C9orf135Q5VTT2 229 aa12.33□□□□□ -0.44
RTFDC1-204ENST00000449062 SPATA21Q7Z572 469 aa12.33□□□□□ -0.44
RTFDC1-204ENST00000449062 TMEM123Q8N131 208 aa12.33□□□□□ -0.44
RTFDC1-204ENST00000449062 C17orf78Q8N4C9 275 aa12.33□□□□□ -0.44
RTFDC1-204ENST00000449062 SCAIQ8N9R8 606 aa12.33□□□□□ -0.44
RTFDC1-204ENST00000449062 ANKK1Q8NFD2 765 aa12.33□□□□□ -0.44
RTFDC1-204ENST00000449062 OR52N5Q8NH56 324 aa12.33□□□□□ -0.44
RTFDC1-204ENST00000449062 RASSF5Q8WWW0 418 aa12.33□□□□□ -0.44
RTFDC1-204ENST00000449062 BCL2L2Q92843 193 aaPredicted RBP12.33□□□□□ -0.44
RTFDC1-204ENST00000449062 EPYCQ99645 322 aa12.33□□□□□ -0.44
RTFDC1-204ENST00000449062 GSX2Q9BZM3 304 aa12.33□□□□□ -0.44
RTFDC1-204ENST00000449062 MRPL39Q9NYK5 338 aaKnown RBP12.33□□□□□ -0.44
RTFDC1-204ENST00000449062 CORINQ9Y5Q5 1042 aa12.33□□□□□ -0.44
RTFDC1-204ENST00000449062 CPSF4LA6NMK7 179 aaKnown RBP12.32□□□□□ -0.44
RTFDC1-204ENST00000449062 FAM220BPB1ANY3 271 aa12.32□□□□□ -0.44
RTFDC1-204ENST00000449062 SNX3O60493 162 aa12.32□□□□□ -0.44
RTFDC1-204ENST00000449062 SMPD2O60906 423 aa12.32□□□□□ -0.44
RTFDC1-204ENST00000449062 TMCC2O75069 709 aa12.32□□□□□ -0.44
RTFDC1-204ENST00000449062 CD8AP01732 235 aa12.32□□□□□ -0.44
RTFDC1-204ENST00000449062 SOD3P08294 240 aa12.32□□□□□ -0.44
RTFDC1-204ENST00000449062 ZNF43P17038 809 aa12.32□□□□□ -0.44
RTFDC1-204ENST00000449062 TNFRSF1BP20333 461 aa12.32□□□□□ -0.44
RTFDC1-204ENST00000449062 CBLP22681 906 aa12.32□□□□□ -0.44
RTFDC1-204ENST00000449062 CLDN17P56750 224 aa12.32□□□□□ -0.44
RTFDC1-204ENST00000449062 NCALDP61601 193 aa12.32□□□□□ -0.44
RTFDC1-204ENST00000449062 TGFBR3Q03167 851 aa12.32□□□□□ -0.44
RTFDC1-204ENST00000449062 PGGHGQ32M88 737 aa12.32□□□□□ -0.44
RTFDC1-204ENST00000449062 SHEQ5VZ18 495 aa12.32□□□□□ -0.44
RTFDC1-204ENST00000449062 NIPAL3Q6P499 406 aa12.32□□□□□ -0.44
RTFDC1-204ENST00000449062 PRSS57Q6UWY2 283 aa12.32□□□□□ -0.44
RTFDC1-204ENST00000449062 HACD2Q6Y1H2 254 aa12.32□□□□□ -0.44
RTFDC1-204ENST00000449062 CARM1Q86X55 608 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms