RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 TRAPPC13A5PLN9 417 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 SCGNO76038 276 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 GOSR1O95249 250 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 CH25HO95992 272 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 ACADSP16219 412 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 CD96P40200 585 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 TPTEP56180 551 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 ACVR1Q04771 509 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 GRINAQ7Z429 371 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 ZBTB8AQ96BR9 441 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 C7orf26Q96N11 449 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 TPK1Q9H3S4 243 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 ABRACLQ9P1F3 81 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 ACSL6Q9UKU0 697 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 HTR3EA5X5Y0 456 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 WRBO00258 174 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 SLC1A7O00341 560 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 SUSD5O60279 629 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 ETFAP13804 333 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 APOBEC1P41238 236 aaKnown RBP5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 SLC9A3P48764 834 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 P2RX1P51575 399 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 PGGT1BP53609 377 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 MTPNP58546 118 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 SLC35B1P78383 322 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 SBSNQ6UWP8 590 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 PIP4P1Q86T03 277 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 CCDC36Q8IYA8 594 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 PLD6Q8N2A8 252 aaKnown RBP5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 BMPERQ8N8U9 685 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 OR2A5Q96R48 311 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 TAS2R7Q9NYW3 318 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 TAAR3PQ9P1P4 343 aa5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 YLPM1P49750 1951 aaKnown RBP5.14□□□□□ -1.59
CDC42BPA-209ENST00000448940 TMED7-TICAM2A0A0A6YYA0 188 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 A0A1W2PRX2 142 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 CXCR6O00574 342 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 TGM6O95932 706 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 TACSTD2P09758 323 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 SELEP16581 610 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 GM2AP17900 193 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 LCN1P31025 176 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 DGCR6Q14129 220 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 PCOLCEQ15113 449 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 TMEM44Q2T9K0 475 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 TRIM16LQ309B1 348 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 ULK3Q6PHR2 472 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 ZNF836Q6ZNA1 936 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 ZBTB49Q6ZSB9 765 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 MDGA2Q7Z553 956 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 C16orf52Q8NHV5 167 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 NUBPLQ8TB37 319 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 ZPLD1Q8TCW7 415 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 TSPEARQ8WU66 669 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 DNAJC9Q8WXX5 260 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 SUCNR1Q9BXA5 334 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 ANKZF1Q9H8Y5 726 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 UNKLQ9H9P5 680 aaKnown RBP5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 SLCO1C1Q9NYB5 712 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 TMED7Q9Y3B3 224 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 IRGMA1A4Y4 181 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 C12orf71A8MTZ7 269 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 NDUFB3O43676 98 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 SNAPC5O75971 98 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 CSF3P09919 207 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 TSPAN19P0C672 248 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 MAGEA2P43356 314 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 SRP9P49458 86 aaKnown RBP5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 ARPC4P59998 168 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 GGTA1PQ4G0N0 100 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.13□□□□□ -1.593e-18■■■■■ 55.1
CDC42BPA-209ENST00000448940 TMEM214Q6NUQ4 689 aaKnown RBP5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 LAS2Q8IYD9 372 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 GALNT4Q8N4A0 578 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 FBXO27Q8NI29 283 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 NANPQ8TBE9 248 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 RNASE6Q93091 150 aaKnown RBP5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 PFDN5Q99471 154 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 SYT3Q9BQG1 590 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 DPAGT1Q9H3H5 408 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 OR2W5A6NFC9 320 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 AGAP5A6NIR3 686 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 H3BSH0 61 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 KHDRBS3O75525 346 aaKnown RBP5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 RPS17P08708 135 aaKnown RBP5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 TACR3P29371 465 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 TTKP33981 857 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 STARP49675 285 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 SNTB2Q13425 540 aaKnown RBP5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 ADRM1Q16186 407 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 BLOC1S3Q6QNY0 202 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 KIRREL2Q6UWL6 708 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 SLC36A1Q7Z2H8 476 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 ZNF101Q8IZC7 436 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 MAML2Q8IZL2 1156 aaPredicted RBP5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 ZNF843Q8N446 348 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 OR52N2Q8NGI0 321 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 TMEM19Q96HH6 336 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 RASL10BQ96S79 203 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms