RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 M1APQ8TC57 530 aa16.03■□□□□ 0.16
LMNA-208ENST00000448611 DNAJA3Q96EY1 480 aa16.03■□□□□ 0.16
LMNA-208ENST00000448611 CNN2Q99439 309 aaKnown RBP16.03■□□□□ 0.16
LMNA-208ENST00000448611 NDEL1Q9GZM8 345 aa16.03■□□□□ 0.16
LMNA-208ENST00000448611 C6orf62Q9GZU0 229 aaPredicted RBP16.03■□□□□ 0.16
LMNA-208ENST00000448611 ZMIZ1Q9ULJ6 1067 aa16.03■□□□□ 0.16
LMNA-208ENST00000448611 TRDV1A0A1B0GX56 115 aa16.02■□□□□ 0.16
LMNA-208ENST00000448611 A0A1W2PQ72 361 aa16.02■□□□□ 0.16
LMNA-208ENST00000448611 SERPINI2O75830 405 aa16.02■□□□□ 0.16
LMNA-208ENST00000448611 FGF9P31371 208 aaPredicted RBP16.02■□□□□ 0.16
LMNA-208ENST00000448611 SLC25A1P53007 311 aa16.02■□□□□ 0.16
LMNA-208ENST00000448611 CLDN6P56747 220 aa16.02■□□□□ 0.16
LMNA-208ENST00000448611 INAQ16352 499 aa16.02■□□□□ 0.16
LMNA-208ENST00000448611 SGCBQ16585 318 aa16.02■□□□□ 0.16
LMNA-208ENST00000448611 CRTC2Q53ET0 693 aaPredicted RBP16.02■□□□□ 0.16
LMNA-208ENST00000448611 CDCP2Q5VXM1 449 aa16.02■□□□□ 0.16
LMNA-208ENST00000448611 C16orf87Q6PH81 154 aa16.02■□□□□ 0.16
LMNA-208ENST00000448611 C5orf46Q6UWT4 87 aa16.02■□□□□ 0.16
LMNA-208ENST00000448611 ARSKQ6UWY0 536 aa16.02■□□□□ 0.16
LMNA-208ENST00000448611 JAZF1Q86VZ6 243 aa16.02■□□□□ 0.16
LMNA-208ENST00000448611 ARIH2OSQ8N7S6 290 aa16.02■□□□□ 0.16
LMNA-208ENST00000448611 EXD3Q8N9H8 876 aa16.02■□□□□ 0.16
LMNA-208ENST00000448611 OR11G2Q8NGC1 345 aa16.02■□□□□ 0.16
LMNA-208ENST00000448611 SLC25A36Q96CQ1 311 aa16.02■□□□□ 0.16
LMNA-208ENST00000448611 ZPBPQ9BS86 351 aa16.02■□□□□ 0.16
LMNA-208ENST00000448611 OR11A1Q9GZK7 315 aa16.02■□□□□ 0.16
LMNA-208ENST00000448611 PPP4R1LQ9P1A2 415 aa16.02■□□□□ 0.16
LMNA-208ENST00000448611 GRHPRQ9UBQ7 328 aa16.02■□□□□ 0.16
LMNA-208ENST00000448611 PADI1Q9ULC6 663 aa16.02■□□□□ 0.16
LMNA-208ENST00000448611 WIF1Q9Y5W5 379 aa16.02■□□□□ 0.16
LMNA-208ENST00000448611 SIRT4Q9Y6E7 314 aaPredicted RBP16.02■□□□□ 0.16
LMNA-208ENST00000448611 ITGA10O75578 1167 aa16.02■□□□□ 0.15
LMNA-208ENST00000448611 MT-ND5P03915 603 aa16.02■□□□□ 0.15
LMNA-208ENST00000448611 TGM1P22735 817 aa16.02■□□□□ 0.15
LMNA-208ENST00000448611 MSX1P28360 303 aa16.02■□□□□ 0.15
LMNA-208ENST00000448611 CASP3P42574 277 aa16.02■□□□□ 0.15
LMNA-208ENST00000448611 E2F1Q01094 437 aa16.02■□□□□ 0.15
LMNA-208ENST00000448611 GPR50Q13585 617 aa16.02■□□□□ 0.15
LMNA-208ENST00000448611 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.02■□□□□ 0.157e-9■■■■□ 20.1
LMNA-208ENST00000448611 MESTQ5EB52 335 aa16.02■□□□□ 0.15
LMNA-208ENST00000448611 LINC01590Q5TEZ4 76 aa16.02■□□□□ 0.15
LMNA-208ENST00000448611 GPR139Q6DWJ6 353 aa16.02■□□□□ 0.15
LMNA-208ENST00000448611 SSX6Q7RTT6 188 aa16.02■□□□□ 0.15
LMNA-208ENST00000448611 ASCL5Q7RTU5 278 aa16.02■□□□□ 0.15
LMNA-208ENST00000448611 OR5J2Q8NH18 312 aa16.02■□□□□ 0.15
LMNA-208ENST00000448611 TAAR9Q96RI9 348 aa16.02■□□□□ 0.15
LMNA-208ENST00000448611 DCLRE1CQ96SD1 692 aaKnown RBP16.02■□□□□ 0.15
LMNA-208ENST00000448611 BARHL1Q9BZE3 327 aa16.02■□□□□ 0.15
LMNA-208ENST00000448611 RERGLQ9H628 205 aa16.02■□□□□ 0.15
LMNA-208ENST00000448611 METTL7AQ9H8H3 244 aa16.02■□□□□ 0.15
LMNA-208ENST00000448611 TMEM9BQ9NQ34 198 aa16.02■□□□□ 0.15
LMNA-208ENST00000448611 PISDQ9UG56 409 aa16.02■□□□□ 0.15
LMNA-208ENST00000448611 B3GNT3Q9Y2A9 372 aa16.02■□□□□ 0.15
LMNA-208ENST00000448611 NOX1Q9Y5S8 564 aa16.02■□□□□ 0.15
LMNA-208ENST00000448611 DXOO77932 396 aaKnown RBP16.01■□□□□ 0.15
LMNA-208ENST00000448611 GLCEO94923 617 aa16.01■□□□□ 0.15
LMNA-208ENST00000448611 DLGAP3O95886 979 aa16.01■□□□□ 0.15
LMNA-208ENST00000448611 CD63P08962 238 aa16.01■□□□□ 0.15
LMNA-208ENST00000448611 OR2T7P0C7T2 308 aa16.01■□□□□ 0.15
LMNA-208ENST00000448611 APOBEC1P41238 236 aaKnown RBP16.01■□□□□ 0.15
LMNA-208ENST00000448611 KRR1Q13601 381 aaKnown RBP16.01■□□□□ 0.15
LMNA-208ENST00000448611 C6orf15Q6UXA7 325 aaPredicted RBP16.01■□□□□ 0.15
LMNA-208ENST00000448611 TIPARPQ7Z3E1 657 aaKnown RBP16.01■□□□□ 0.15
LMNA-208ENST00000448611 GPALPP1Q8IXQ4 340 aa16.01■□□□□ 0.15
LMNA-208ENST00000448611 RFLNBQ8N5W9 214 aa16.01■□□□□ 0.15
LMNA-208ENST00000448611 OR2T27Q8NH04 317 aa16.01■□□□□ 0.15
LMNA-208ENST00000448611 OR6S1Q8NH40 331 aa16.01■□□□□ 0.15
LMNA-208ENST00000448611 C4orf36Q96KX1 117 aa16.01■□□□□ 0.15
LMNA-208ENST00000448611 KCTD7Q96MP8 289 aa16.01■□□□□ 0.15
LMNA-208ENST00000448611 COQ7Q99807 217 aa16.01■□□□□ 0.15
LMNA-208ENST00000448611 DDA1Q9BW61 102 aa16.01■□□□□ 0.15
LMNA-208ENST00000448611 TRIM36Q9NQ86 728 aa16.01■□□□□ 0.15
LMNA-208ENST00000448611 RPRD1BQ9NQG5 326 aaKnown RBP16.01■□□□□ 0.15
LMNA-208ENST00000448611 SDHAF3Q9NRP4 125 aa16.01■□□□□ 0.15
LMNA-208ENST00000448611 WDR70Q9NW82 654 aa16.01■□□□□ 0.15
LMNA-208ENST00000448611 ZNF346Q9UL40 294 aaKnown RBP16.01■□□□□ 0.15
LMNA-208ENST00000448611 CHCHD2Q9Y6H1 151 aaPredicted RBP16.01■□□□□ 0.15
LMNA-208ENST00000448611 A0A075B6Q4 140 aa16■□□□□ 0.15
LMNA-208ENST00000448611 FTCDNL1E5RQL4 147 aa16■□□□□ 0.15
LMNA-208ENST00000448611 AHSA1O95433 338 aa16■□□□□ 0.15
LMNA-208ENST00000448611 IL1AP01583 271 aa16■□□□□ 0.15
LMNA-208ENST00000448611 IGHEP01854 428 aa16■□□□□ 0.15
LMNA-208ENST00000448611 GRPRP30550 384 aa16■□□□□ 0.15
LMNA-208ENST00000448611 NAA10P41227 235 aaPredicted RBP16■□□□□ 0.15
LMNA-208ENST00000448611 HCCSP53701 268 aa16■□□□□ 0.15
LMNA-208ENST00000448611 OR12D2P58182 307 aa16■□□□□ 0.15
LMNA-208ENST00000448611 FOXF1Q12946 379 aa16■□□□□ 0.15
LMNA-208ENST00000448611 TBC1D25Q3MII6 688 aa16■□□□□ 0.15
LMNA-208ENST00000448611 NDUFAF7Q7L592 441 aa16■□□□□ 0.15
LMNA-208ENST00000448611 VASH1Q7L8A9 365 aaPredicted RBP16■□□□□ 0.15
LMNA-208ENST00000448611 LIN37Q96GY3 246 aaPredicted RBP16■□□□□ 0.15
LMNA-208ENST00000448611 MED18Q9BUE0 208 aa16■□□□□ 0.15
LMNA-208ENST00000448611 TMED9Q9BVK6 235 aa16■□□□□ 0.15
LMNA-208ENST00000448611 SPRY4Q9C004 299 aa16■□□□□ 0.15
LMNA-208ENST00000448611 SNTG1Q9NSN8 517 aa16■□□□□ 0.15
LMNA-208ENST00000448611 VDAC3Q9Y277 283 aa16■□□□□ 0.15
LMNA-208ENST00000448611 EP300Q09472 2414 aaPredicted RBP16■□□□□ 0.15
LMNA-208ENST00000448611 WDFY3Q8IZQ1 3526 aa16■□□□□ 0.15
LMNA-208ENST00000448611 E9PI62 339 aa16■□□□□ 0.15
LMNA-208ENST00000448611 OR2T1O43869 369 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms