RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 PRRC2CQ9Y520 2896 aaKnown RBP6.75□□□□□ -1.33
SF3A3P1-201ENST00000446317 IGSF10Q6WRI0 2623 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 SLC22A20A6NK97 555 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 FAM171A2A8MVW0 826 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 MS4A18H0YCH9 400 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 ETV2O00321 342 aaPredicted RBP6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 PLPP3O14495 311 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 ZNF208O43345 1280 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 TP53P04637 393 aaPredicted RBP6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 ADH6P28332 368 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 PTDSS1P48651 473 aaKnown RBP6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 HMGA2P52926 109 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 CTBP2P56545 445 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 CLDN17P56750 224 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 CTXN1P60606 82 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 RUNX1T1Q06455 604 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 PMPCAQ10713 525 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 FOXF2Q12947 444 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 FHL1Q13642 323 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 C1DQ13901 141 aaKnown RBP6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 SNCBQ16143 134 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 ZNF239Q16600 458 aaKnown RBP6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 MS4A18Q3C1V0 323 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 ACSF3Q4G176 576 aaPredicted RBP6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 FAM69AQ5T7M9 428 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 C1orf185Q5T7R7 199 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 TMEM225Q6GV28 225 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 RTL6Q6ICC9 239 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 IZUMO2Q6UXV1 221 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 ESPNLQ6ZVH7 1005 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 FCRLAQ7L513 359 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 MAMDC2Q7Z304 686 aaPredicted RBP6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 NUFIP2Q7Z417 695 aaKnown RBP6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 FJX1Q86VR8 437 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 DOLPP1Q86YN1 238 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 CCDC71Q8IV32 467 aaPredicted RBP6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 MARVELD2Q8N4S9 558 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 ZNF454Q8N9F8 522 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 SYT14Q8NB59 555 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 OR5J2Q8NH18 312 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 FAM57AQ8TBR7 257 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 ZPLD1Q8TCW7 415 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 SLC25A43Q8WUT9 341 aaPredicted RBP6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 UBE2FQ969M7 185 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 MIB2Q96AX9 1013 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 SARAFQ96BY9 339 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 ZNF570Q96NI8 536 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 ZNF385AQ96PM9 386 aaKnown RBP6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 C9orf16Q9BUW7 83 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 IFT27Q9BW83 186 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 TSSK6Q9BXA6 273 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 KLHL4Q9C0H6 718 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 POLR2J2Q9GZM3 115 aaKnown RBP6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 OR52D1Q9H346 318 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 MED20Q9H944 212 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 TAS2R5Q9NYW4 299 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 REV1Q9UBZ9 1251 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 MGAT4BQ9UQ53 548 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 GPR52Q9Y2T5 361 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 MRPS18CQ9Y3D5 142 aaKnown RBP6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 IER3IP1Q9Y5U9 82 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 SMG1Q96Q15 3661 aaKnown RBP6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 ATRXP46100 2492 aa6.74□□□□□ -1.33
SF3A3P1-201ENST00000446317 TEX13CA0A0J9YWL9 993 aa6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 A0A1B0GVC2 190 aa6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 GJE1A6NN92 205 aa6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 CDK2AP1O14519 115 aa6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 PRRG2O14669 202 aa6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 KLF4O43474 513 aa6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 SEC14L2O76054 403 aa6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 PMS2P2O95744 297 aa6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 GPANK1O95872 356 aa6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 ASAH2BP0C7U1 165 aa6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 IFNGR1P15260 489 aa6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 CDH2P19022 906 aaPredicted RBP6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 NTF4P34130 210 aa6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 IFNGR2P38484 337 aa6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 P2RY4P51582 365 aa6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 BIDP55957 195 aa6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 DLX5P56178 289 aa6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 RPS3AP61247 264 aaKnown RBP6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 CSNK2A1P68400 391 aaPredicted RBP6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 SLC35A1P78382 337 aa6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 PPP2R2BQ00005 443 aa6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 RASGEF1BQ0VAM2 473 aa6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 TSPAN31Q12999 210 aa6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 CAMK2DQ13557 499 aa6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 SNTB1Q13884 538 aaKnown RBP6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 GINS1Q14691 196 aa6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 TSC22D1Q15714 1073 aa6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 ZBED5Q49AG3 693 aa6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 ALG10Q5BKT4 473 aa6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 PDSS1Q5T2R2 415 aa6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 OGFRL1Q5TC84 451 aaPredicted RBP6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 ALKBH2Q6NS38 261 aa6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 ACSM5Q6NUN0 579 aa6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 C1orf94Q6P1W5 598 aa6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 FAHD1Q6P587 224 aa6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 ZNF620Q6ZNG0 422 aa6.73□□□□□ -1.33
SF3A3P1-201ENST00000446317 SEM1Q6ZVN7 128 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms