RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	OR4K14	Q8NGD5	310 aa		11.52	□□□□□ -0.56
DDR1-238	ENST00000446312	KISS1R	Q969F8	398 aa	Predicted RBP	11.52	□□□□□ -0.56
DDR1-238	ENST00000446312	ZNF514	Q96K75	400 aa	Predicted RBP	11.52	□□□□□ -0.56
DDR1-238	ENST00000446312	CRB3	Q9BUF7	120 aa		11.52	□□□□□ -0.56
DDR1-238	ENST00000446312	MENT	Q9BUN1	341 aa		11.52	□□□□□ -0.56
DDR1-238	ENST00000446312	SHARPIN	Q9H0F6	387 aa		11.52	□□□□□ -0.56
DDR1-238	ENST00000446312	ADGRL4	Q9HBW9	690 aa		11.52	□□□□□ -0.56
DDR1-238	ENST00000446312	COA4	Q9NYJ1	87 aa		11.52	□□□□□ -0.56
DDR1-238	ENST00000446312	RPS6KB2	Q9UBS0	482 aa		11.52	□□□□□ -0.56
DDR1-238	ENST00000446312	CTSF	Q9UBX1	484 aa		11.52	□□□□□ -0.56
DDR1-238	ENST00000446312	TMEM72	A0PK05	275 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	TRAPPC13	A5PLN9	417 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	LILRB3	O75022	631 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	EPX	P11678	715 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	MTNR1B	P49286	362 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	HTR4	Q13639	388 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	OPCML	Q14982	345 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	PRRT3	Q5FWE3	981 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	ALG10B	Q5I7T1	473 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	FAM78A	Q5JUQ0	283 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	GPR139	Q6DWJ6	353 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	ATRAID	Q6UW56	229 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	SYNPR	Q8TBG9	265 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	KXD1	Q9BQD3	176 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	SRMS	Q9H3Y6	488 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	PELI2	Q9HAT8	420 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	TRPV4	Q9HBA0	871 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312		A0A1B0GWA3	101 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	CACNB4	O00305	520 aa	Predicted RBP	11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	KHNYN	O15037	678 aa	Known RBP	11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	OR10H2	O60403	315 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	CLEC3A	O75596	197 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	LY86	O95711	162 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	ADH1C	P00326	375 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	CXCL2	P19875	107 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	NDUFS1	P28331	727 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	DRD3	P35462	400 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	HSF2	Q03933	536 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	TMEM69	Q5SWH9	247 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	ANKRD33	Q7Z3H0	272 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	VN1R4	Q7Z5H5	301 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	NRROS	Q86YC3	692 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	NRSN1	Q8IZ57	195 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	KIAA1143	Q96AT1	154 aa	Predicted RBP	11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	SCMH1	Q96GD3	660 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	ARHGDIG	Q99819	225 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	RPP25	Q9BUL9	199 aa	Known RBP	11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	NOX3	Q9HBY0	568 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	MIOX	Q9UGB7	285 aa		11.52	□□□□□ -0.57
DDR1-238	ENST00000446312	EDDM13	A0A1B0GTR0	161 aa		11.51	□□□□□ -0.57
DDR1-238	ENST00000446312	PRR32	B1ATL7	298 aa		11.51	□□□□□ -0.57
DDR1-238	ENST00000446312	CASC3	O15234	703 aa	Known RBP	11.51	□□□□□ -0.57
DDR1-238	ENST00000446312	VEGFD	O43915	354 aa		11.51	□□□□□ -0.57
DDR1-238	ENST00000446312	IGF2	P01344	180 aa		11.51	□□□□□ -0.57
DDR1-238	ENST00000446312	HLA-DQA2	P01906	255 aa		11.51	□□□□□ -0.57
DDR1-238	ENST00000446312	DDX6	P26196	483 aa	Known RBP eCLIP	11.51	□□□□□ -0.57	4e-7	■■□□□ 13.4
DDR1-238	ENST00000446312	RAB13	P51153	203 aa		11.51	□□□□□ -0.57
DDR1-238	ENST00000446312	DECR1	Q16698	335 aa		11.51	□□□□□ -0.57
DDR1-238	ENST00000446312	ELP2	Q6IA86	826 aa		11.51	□□□□□ -0.57
DDR1-238	ENST00000446312	LIX1L	Q8IVB5	337 aa		11.51	□□□□□ -0.57
DDR1-238	ENST00000446312	OR51A4	Q8NGJ6	313 aa		11.51	□□□□□ -0.57
DDR1-238	ENST00000446312		Q96M85	177 aa		11.51	□□□□□ -0.57
DDR1-238	ENST00000446312	PFDN5	Q99471	154 aa		11.51	□□□□□ -0.57
DDR1-238	ENST00000446312	PDCD10	Q9BUL8	212 aa		11.51	□□□□□ -0.57
DDR1-238	ENST00000446312	ZNF436	Q9C0F3	470 aa	Predicted RBP	11.51	□□□□□ -0.57
DDR1-238	ENST00000446312	HRASLS	Q9HDD0	168 aa		11.51	□□□□□ -0.57
DDR1-238	ENST00000446312	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	11.51	□□□□□ -0.57
DDR1-238	ENST00000446312	FAM74A7	A6NL05	159 aa		11.51	□□□□□ -0.57
DDR1-238	ENST00000446312	KRBOX1	C9JBD0	128 aa		11.51	□□□□□ -0.57
DDR1-238	ENST00000446312	BHLHE40	O14503	412 aa		11.51	□□□□□ -0.57
DDR1-238	ENST00000446312	RLN2	P04090	185 aa		11.51	□□□□□ -0.57
DDR1-238	ENST00000446312	FOXL2	P58012	376 aa		11.51	□□□□□ -0.57
DDR1-238	ENST00000446312	LGALS3BP	Q08380	585 aa		11.51	□□□□□ -0.57
DDR1-238	ENST00000446312	FGL1	Q08830	312 aa		11.51	□□□□□ -0.57
DDR1-238	ENST00000446312	FAM74A3	Q4VXF1	159 aa		11.51	□□□□□ -0.57
DDR1-238	ENST00000446312	TFAP2E	Q6VUC0	442 aa		11.51	□□□□□ -0.57
DDR1-238	ENST00000446312	SLC35D2	Q76EJ3	337 aa		11.51	□□□□□ -0.57
DDR1-238	ENST00000446312	PRR22	Q8IZ63	422 aa		11.51	□□□□□ -0.57
DDR1-238	ENST00000446312	CHST6	Q9GZX3	395 aa		11.51	□□□□□ -0.57
DDR1-238	ENST00000446312	MTHFD2L	Q9H903	347 aa	Predicted RBP	11.51	□□□□□ -0.57
DDR1-238	ENST00000446312	BCL2L10	Q9HD36	194 aa		11.51	□□□□□ -0.57
DDR1-238	ENST00000446312	C2orf42	Q9NWW7	574 aa		11.51	□□□□□ -0.57
DDR1-238	ENST00000446312	GPR34	Q9UPC5	381 aa		11.51	□□□□□ -0.57
DDR1-238	ENST00000446312	PCDHGA5	Q9Y5G8	931 aa		11.51	□□□□□ -0.57
DDR1-238	ENST00000446312	PRRC2C	Q9Y520	2896 aa	Known RBP	11.51	□□□□□ -0.57
DDR1-238	ENST00000446312	COL4A3	Q01955	1670 aa		11.5	□□□□□ -0.57
DDR1-238	ENST00000446312	IRGM	A1A4Y4	181 aa		11.5	□□□□□ -0.57
DDR1-238	ENST00000446312	TSPAN11	A1L157	253 aa		11.5	□□□□□ -0.57
DDR1-238	ENST00000446312	CDC14C	A4D256	554 aa		11.5	□□□□□ -0.57
DDR1-238	ENST00000446312	C11orf98	E9PRG8	122 aa		11.5	□□□□□ -0.57
DDR1-238	ENST00000446312	CCS	O14618	274 aa		11.5	□□□□□ -0.57
DDR1-238	ENST00000446312	IGHA1	P01876	353 aa		11.5	□□□□□ -0.57
DDR1-238	ENST00000446312	TPO	P07202	933 aa		11.5	□□□□□ -0.57
DDR1-238	ENST00000446312	HEXB	P07686	556 aa		11.5	□□□□□ -0.57
DDR1-238	ENST00000446312	PTH2R	P49190	550 aa		11.5	□□□□□ -0.57
DDR1-238	ENST00000446312	NANOS3	P60323	173 aa	Known RBP	11.5	□□□□□ -0.57
DDR1-238	ENST00000446312	PDGFRL	Q15198	375 aa		11.5	□□□□□ -0.57
DDR1-238	ENST00000446312	COL28A1	Q2UY09	1125 aa		11.5	□□□□□ -0.57
DDR1-238	ENST00000446312	OR10K2	Q6IF99	312 aa		11.5	□□□□□ -0.57
DDR1-238	ENST00000446312	OR6S1	Q8NH40	331 aa		11.5	□□□□□ -0.57

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