RNA–Protein interactions for RNA: ENST00000445184.1

LINC01004-201, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 5 BASIC

Gene LINC01004, Length 686 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-201ENST00000445184 ZNF24P17028 368 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 ACVR1BP36896 505 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 ELK3P41970 407 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 PRRX1P54821 245 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 RPS8P62241 208 aaKnown RBP3.11□□□□□ -1.91
LINC01004-201ENST00000445184 OTUD4Q01804 1114 aaKnown RBP3.11□□□□□ -1.91
LINC01004-201ENST00000445184 PUDPQ08623 228 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 IFFO1Q0D2I5 559 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 BST2Q10589 180 aaKnown RBP3.11□□□□□ -1.91
LINC01004-201ENST00000445184 MRPL28Q13084 256 aaKnown RBP3.11□□□□□ -1.91
LINC01004-201ENST00000445184 VGLL4Q14135 290 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 IMMTQ16891 758 aaKnown RBP3.11□□□□□ -1.91
LINC01004-201ENST00000445184 TMEM31Q5JXX7 168 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 PRAMEF20Q5VT98 475 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 LRRC66Q68CR7 880 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 OR8G2PQ6IF36 304 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 OR2A2Q6IF42 318 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 C16orf87Q6PH81 154 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 ZNF600Q6ZNG1 722 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 BIVMQ86UB2 503 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 TPRA1Q86W33 373 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 ERICH1Q86X53 443 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 SPAG16Q8N0X2 631 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 CSNK1A1LQ8N752 337 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 OR2L3Q8NG85 312 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 OR6T1Q8NGN1 323 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 ERMNQ8TAM6 284 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 TOMM40LQ969M1 308 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 UBE2E3Q969T4 207 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 TM4SF19Q96DZ7 209 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 RBM14Q96PK6 669 aaKnown RBP3.11□□□□□ -1.91
LINC01004-201ENST00000445184 COPS8Q99627 209 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 TSGA10Q9BZW7 698 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 PRO3102Q9H379 93 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 SMYD3Q9H7B4 428 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 QPCTLQ9NXS2 382 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 CLEC5AQ9NY25 188 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 ZNF581Q9P0T4 197 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 MUTYHQ9UIF7 546 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 NPTNQ9Y639 398 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 MAD1L1Q9Y6D9 718 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 TTC41PQ6P2S7 1318 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 PHLPP2Q6ZVD8 1323 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 TTC21BQ7Z4L5 1316 aa3.11□□□□□ -1.91
LINC01004-201ENST00000445184 GCN1Q92616 2671 aaKnown RBP3.11□□□□□ -1.91
LINC01004-201ENST00000445184 PPIP5K1Q6PFW1 1433 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 COL5A2P05997 1499 aaPredicted RBP3.1□□□□□ -1.91
LINC01004-201ENST00000445184 SCN4AP35499 1836 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 KIF13BQ9NQT8 1826 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 BRCA1P38398 1863 aaKnown RBP3.1□□□□□ -1.91
LINC01004-201ENST00000445184 NCOR2Q9Y618 2525 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 NDUFAF8A1L188 74 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 PRKYO43930 277 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 CIB2O75838 187 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 AGTP01019 485 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 CT62P0C5K7 136 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 ATP1B2P14415 290 aaPredicted RBP3.1□□□□□ -1.91
LINC01004-201ENST00000445184 COX5AP20674 150 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 EPS15P42566 896 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 XCR1P46094 333 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 HLCSP50747 726 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 PRKXP51817 358 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 ATP1B3P54709 279 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 SH3BGRP55822 239 aaPredicted RBP3.1□□□□□ -1.91
LINC01004-201ENST00000445184 KRTAP12-2P59991 146 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 OGDHQ02218 1023 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 PLD1Q13393 1074 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 DYNC1I2Q13409 638 aaKnown RBP3.1□□□□□ -1.91
LINC01004-201ENST00000445184 GRB7Q14451 532 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 LCE1CQ5T751 118 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 LCE1BQ5T7P3 118 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 LEMD1Q68G75 181 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 KCNIP4Q6PIL6 250 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 DOK6Q6PKX4 331 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 SLC25A48Q6ZT89 311 aaKnown RBP3.1□□□□□ -1.91
LINC01004-201ENST00000445184 PLA2G4DQ86XP0 818 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 LRRC8AQ8IWT6 810 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 SLC22A18ASQ8N1D0 253 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 LYG1Q8N1E2 194 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 OR2T33Q8NG76 320 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 OR4Q3Q8NH05 313 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 FAF2Q96CS3 445 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 C12orf42Q96LP6 360 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 C1orf147Q96MC9 270 aaPredicted RBP3.1□□□□□ -1.91
LINC01004-201ENST00000445184 RPRD1AQ96P16 312 aaPredicted RBP3.1□□□□□ -1.91
LINC01004-201ENST00000445184 RANBP9Q96S59 729 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 TRIM62Q9BVG3 475 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 NUP58Q9BVL2 599 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 NAT10Q9H0A0 1025 aaKnown RBP3.1□□□□□ -1.91
LINC01004-201ENST00000445184 ADNPQ9H2P0 1102 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 NARFLQ9H6Q4 476 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 EXO5Q9H790 373 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 HEXA-AS1Q9H8Q6 139 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 PRPF19Q9UMS4 504 aaKnown RBP3.1□□□□□ -1.91
LINC01004-201ENST00000445184 PEX16Q9Y5Y5 336 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 USP34Q70CQ2 3546 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 ALS2Q96Q42 1657 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 REV3LO60673 3130 aa3.1□□□□□ -1.91
LINC01004-201ENST00000445184 SLIT3O75094 1523 aa3.09□□□□□ -1.91
LINC01004-201ENST00000445184 ABCC6O95255 1503 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms