RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 SLC38A4Q969I6 547 aa18.34■□□□□ 0.53
VSX1-206ENST00000444511 SPDL1Q96EA4 605 aa18.34■□□□□ 0.53
VSX1-206ENST00000444511 KATNB1Q9BVA0 655 aa18.34■□□□□ 0.53
VSX1-206ENST00000444511 SPATA5L1Q9BVQ7 753 aa18.34■□□□□ 0.53
VSX1-206ENST00000444511 C12orf10Q9HB07 376 aa18.34■□□□□ 0.53
VSX1-206ENST00000444511 CCDC167Q9P0B6 97 aa18.34■□□□□ 0.53
VSX1-206ENST00000444511 RCE1Q9Y256 329 aa18.34■□□□□ 0.53
VSX1-206ENST00000444511 ABCA1O95477 2261 aa18.34■□□□□ 0.53
VSX1-206ENST00000444511 A0A096LPE4 126 aa18.33■□□□□ 0.52
VSX1-206ENST00000444511 ARPC4-TTLL3A0A0A6YYG9 625 aa18.33■□□□□ 0.52
VSX1-206ENST00000444511 A0A1B0GWA3 101 aa18.33■□□□□ 0.52
VSX1-206ENST00000444511 A0A1W2PPZ6 126 aa18.33■□□□□ 0.52
VSX1-206ENST00000444511 AIM2O14862 343 aa18.33■□□□□ 0.52
VSX1-206ENST00000444511 SLC43A1O75387 559 aa18.33■□□□□ 0.52
VSX1-206ENST00000444511 ARAFP10398 606 aa18.33■□□□□ 0.52
VSX1-206ENST00000444511 IDH3AP50213 366 aa18.33■□□□□ 0.52
VSX1-206ENST00000444511 SNRPD2P62316 118 aaKnown RBP18.33■□□□□ 0.52
VSX1-206ENST00000444511 TUBA1BP68363 451 aa18.33■□□□□ 0.52
VSX1-206ENST00000444511 TUBA4AP68366 448 aa18.33■□□□□ 0.52
VSX1-206ENST00000444511 IL1RL1Q01638 556 aa18.33■□□□□ 0.52
VSX1-206ENST00000444511 SWI5Q1ZZU3 235 aa18.33■□□□□ 0.52
VSX1-206ENST00000444511 CHRFAM7AQ494W8 412 aa18.33■□□□□ 0.52
VSX1-206ENST00000444511 C6orf52Q5T4I8 152 aa18.33■□□□□ 0.52
VSX1-206ENST00000444511 FAM69AQ5T7M9 428 aa18.33■□□□□ 0.52
VSX1-206ENST00000444511 AGBL2Q5U5Z8 902 aa18.33■□□□□ 0.52
VSX1-206ENST00000444511 REEP3Q6NUK4 255 aa18.33■□□□□ 0.52
VSX1-206ENST00000444511 TUBA1AQ71U36 451 aa18.33■□□□□ 0.52
VSX1-206ENST00000444511 FUNDC1Q8IVP5 155 aa18.33■□□□□ 0.52
VSX1-206ENST00000444511 MSRB3Q8IXL7 192 aa18.33■□□□□ 0.52
VSX1-206ENST00000444511 LSMEM1Q8N8F7 131 aa18.33■□□□□ 0.52
VSX1-206ENST00000444511 MAGEE2Q8TD90 523 aaPredicted RBP18.33■□□□□ 0.52
VSX1-206ENST00000444511 C10orf105Q8TEF2 133 aa18.33■□□□□ 0.52
VSX1-206ENST00000444511 OXGR1Q96P68 337 aa18.33■□□□□ 0.52
VSX1-206ENST00000444511 EBF4Q9BQW3 602 aa18.33■□□□□ 0.52
VSX1-206ENST00000444511 MOV10Q9HCE1 1003 aaKnown RBP18.33■□□□□ 0.52
VSX1-206ENST00000444511 SLAMF8Q9P0V8 285 aa18.33■□□□□ 0.52
VSX1-206ENST00000444511 SEC14L4Q9UDX3 406 aa18.33■□□□□ 0.52
VSX1-206ENST00000444511 FKBP7Q9Y680 259 aa18.33■□□□□ 0.52
VSX1-206ENST00000444511 M0R082 166 aa18.32■□□□□ 0.52
VSX1-206ENST00000444511 LY6HO94772 140 aa18.32■□□□□ 0.52
VSX1-206ENST00000444511 F12P00748 615 aaPredicted RBP18.32■□□□□ 0.52
VSX1-206ENST00000444511 SERPINF1P36955 418 aa18.32■□□□□ 0.52
VSX1-206ENST00000444511 NCALDP61601 193 aa18.32■□□□□ 0.52
VSX1-206ENST00000444511 VLDLRP98155 873 aa18.32■□□□□ 0.52
VSX1-206ENST00000444511 CDK6Q00534 326 aa18.32■□□□□ 0.52
VSX1-206ENST00000444511 MST1LQ2TV78 715 aa18.32■□□□□ 0.52
VSX1-206ENST00000444511 ALG10BQ5I7T1 473 aa18.32■□□□□ 0.52
VSX1-206ENST00000444511 PODNL1Q6PEZ8 512 aa18.32■□□□□ 0.52
VSX1-206ENST00000444511 DHRS4L2Q6PKH6 230 aa18.32■□□□□ 0.52
VSX1-206ENST00000444511 ZNF417Q8TAU3 575 aa18.32■□□□□ 0.52
VSX1-206ENST00000444511 RNF217Q8TC41 542 aa18.32■□□□□ 0.52
VSX1-206ENST00000444511 DNAJA4Q8WW22 397 aaPredicted RBP18.32■□□□□ 0.52
VSX1-206ENST00000444511 NANOS1Q8WY41 292 aaKnown RBP18.32■□□□□ 0.52
VSX1-206ENST00000444511 PROX1Q92786 737 aa18.32■□□□□ 0.52
VSX1-206ENST00000444511 TAAR8Q969N4 342 aa18.32■□□□□ 0.52
VSX1-206ENST00000444511 ZNF587Q96SQ5 575 aaPredicted RBP18.32■□□□□ 0.52
VSX1-206ENST00000444511 CCDC28BQ9BUN5 200 aa18.32■□□□□ 0.52
VSX1-206ENST00000444511 SLCO1B3Q9NPD5 702 aa18.32■□□□□ 0.52
VSX1-206ENST00000444511 CA10Q9NS85 328 aa18.32■□□□□ 0.52
VSX1-206ENST00000444511 SELENONQ9NZV5 590 aa18.32■□□□□ 0.52
VSX1-206ENST00000444511 TRAV36DV7A0A075B6V5 113 aa18.31■□□□□ 0.52
VSX1-206ENST00000444511 AKAP8O43823 692 aaKnown RBP18.31■□□□□ 0.52
VSX1-206ENST00000444511 ZNF432O94892 652 aa18.31■□□□□ 0.52
VSX1-206ENST00000444511 CECR9P0C854 216 aa18.31■□□□□ 0.52
VSX1-206ENST00000444511 HOXB1P14653 301 aaPredicted RBP18.31■□□□□ 0.52
VSX1-206ENST00000444511 HTR2AP28223 471 aa18.31■□□□□ 0.52
VSX1-206ENST00000444511 GRPRP30550 384 aa18.31■□□□□ 0.52
VSX1-206ENST00000444511 ARF1P84077 181 aaKnown RBP18.31■□□□□ 0.52
VSX1-206ENST00000444511 NAAAQ02083 359 aa18.31■□□□□ 0.52
VSX1-206ENST00000444511 C3orf36Q3SXR2 165 aa18.31■□□□□ 0.52
VSX1-206ENST00000444511 PAGE3Q5JUK9 113 aa18.31■□□□□ 0.52
VSX1-206ENST00000444511 ULK3Q6PHR2 472 aa18.31■□□□□ 0.52
VSX1-206ENST00000444511 SLC46A3Q7Z3Q1 461 aa18.31■□□□□ 0.52
VSX1-206ENST00000444511 C10orf111Q8N326 155 aa18.31■□□□□ 0.52
VSX1-206ENST00000444511 GPR137CQ8N3F9 429 aa18.31■□□□□ 0.52
VSX1-206ENST00000444511 ANKK1Q8NFD2 765 aa18.31■□□□□ 0.52
VSX1-206ENST00000444511 SPATA3Q8NHX4 192 aa18.31■□□□□ 0.52
VSX1-206ENST00000444511 NELFAQ9H3P2 528 aa18.31■□□□□ 0.52
VSX1-206ENST00000444511 VAPAQ9P0L0 249 aa18.31■□□□□ 0.52
VSX1-206ENST00000444511 B3GAT1Q9P2W7 334 aa18.31■□□□□ 0.52
VSX1-206ENST00000444511 CRNNQ9UBG3 495 aaPredicted RBP18.31■□□□□ 0.52
VSX1-206ENST00000444511 SLC13A4Q9UKG4 626 aa18.31■□□□□ 0.52
VSX1-206ENST00000444511 CORO2BQ9UQ03 480 aa18.31■□□□□ 0.52
VSX1-206ENST00000444511 ALPK2Q86TB3 2170 aa18.31■□□□□ 0.52
VSX1-206ENST00000444511 PRORSD1PA6NEY8 169 aa18.3■□□□□ 0.52
VSX1-206ENST00000444511 RPL36A-HNRNPH2H7BZ11 118 aa18.3■□□□□ 0.52
VSX1-206ENST00000444511 FZD7O75084 574 aa18.3■□□□□ 0.52
VSX1-206ENST00000444511 USF1P22415 310 aaPredicted RBP18.3■□□□□ 0.52
VSX1-206ENST00000444511 CBLP22681 906 aa18.3■□□□□ 0.52
VSX1-206ENST00000444511 PDLIM4P50479 330 aa18.3■□□□□ 0.52
VSX1-206ENST00000444511 AQP5P55064 265 aa18.3■□□□□ 0.52
VSX1-206ENST00000444511 RGS8P57771 180 aaPredicted RBP18.3■□□□□ 0.52
VSX1-206ENST00000444511 SCARB2Q14108 478 aa18.3■□□□□ 0.52
VSX1-206ENST00000444511 GLIPR1L2Q4G1C9 344 aa18.3■□□□□ 0.52
VSX1-206ENST00000444511 FAM91A1Q658Y4 838 aa18.3■□□□□ 0.52
VSX1-206ENST00000444511 VHLLQ6RSH7 139 aa18.3■□□□□ 0.52
VSX1-206ENST00000444511 H1FNTQ75WM6 255 aaPredicted RBP18.3■□□□□ 0.52
VSX1-206ENST00000444511 NET1Q7Z628 596 aaPredicted RBP18.3■□□□□ 0.52
VSX1-206ENST00000444511 COMTD1Q86VU5 262 aa18.3■□□□□ 0.52
VSX1-206ENST00000444511 PIK3C3Q8NEB9 887 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms