RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 CDKN1AP38936 164 aa17.61■□□□□ 0.41
LRCH3-208ENST00000443727 ARFIP2P53365 341 aa17.61■□□□□ 0.41
LRCH3-208ENST00000443727 CLDN17P56750 224 aa17.61■□□□□ 0.41
LRCH3-208ENST00000443727 LGALS3BPQ08380 585 aa17.61■□□□□ 0.41
LRCH3-208ENST00000443727 CYLC2Q14093 348 aaPredicted RBP17.61■□□□□ 0.41
LRCH3-208ENST00000443727 PGGHGQ32M88 737 aa17.61■□□□□ 0.41
LRCH3-208ENST00000443727 HSP90B2PQ58FF3 399 aa17.61■□□□□ 0.41
LRCH3-208ENST00000443727 AGAP6Q5VW22 663 aa17.61■□□□□ 0.41
LRCH3-208ENST00000443727 HMBOX1Q6NT76 420 aa17.61■□□□□ 0.41
LRCH3-208ENST00000443727 H1FNTQ75WM6 255 aaPredicted RBP17.61■□□□□ 0.41
LRCH3-208ENST00000443727 CIARTQ8N365 385 aaPredicted RBP17.61■□□□□ 0.41
LRCH3-208ENST00000443727 C10orf53Q8N6V4 93 aa17.61■□□□□ 0.41
LRCH3-208ENST00000443727 OR10A6Q8NH74 314 aa17.61■□□□□ 0.41
LRCH3-208ENST00000443727 ZNF417Q8TAU3 575 aa17.61■□□□□ 0.41
LRCH3-208ENST00000443727 SLC26A7Q8TE54 656 aa17.61■□□□□ 0.41
LRCH3-208ENST00000443727 OXGR1Q96P68 337 aa17.61■□□□□ 0.41
LRCH3-208ENST00000443727 ALKBH3Q96Q83 286 aaPredicted RBP17.61■□□□□ 0.41
LRCH3-208ENST00000443727 ZNF587Q96SQ5 575 aaPredicted RBP17.61■□□□□ 0.41
LRCH3-208ENST00000443727 KAT8Q9H7Z6 458 aaKnown RBP17.61■□□□□ 0.41
LRCH3-208ENST00000443727 SEC14L4Q9UDX3 406 aa17.61■□□□□ 0.41
LRCH3-208ENST00000443727 IGKV1D-42A0A075B6H8 117 aa17.6■□□□□ 0.41
LRCH3-208ENST00000443727 OVOL3O00110 214 aa17.6■□□□□ 0.41
LRCH3-208ENST00000443727 LGI1O95970 557 aa17.6■□□□□ 0.41
LRCH3-208ENST00000443727 PCBP3P57721 371 aaKnown RBP17.6■□□□□ 0.41
LRCH3-208ENST00000443727 SPOCK1Q08629 439 aa17.6■□□□□ 0.41
LRCH3-208ENST00000443727 MFSD13AQ14CX5 517 aa17.6■□□□□ 0.41
LRCH3-208ENST00000443727 MMEL1Q495T6 779 aa17.6■□□□□ 0.41
LRCH3-208ENST00000443727 HIKESHIQ53FT3 197 aa17.6■□□□□ 0.41
LRCH3-208ENST00000443727 C1QTNF12Q5T7M4 302 aa17.6■□□□□ 0.41
LRCH3-208ENST00000443727 PATL1Q86TB9 770 aaKnown RBP17.6■□□□□ 0.41
LRCH3-208ENST00000443727 MCHR1Q99705 422 aa17.6■□□□□ 0.41
LRCH3-208ENST00000443727 FKRPQ9H9S5 495 aa17.6■□□□□ 0.41
LRCH3-208ENST00000443727 KLHL14Q9P2G3 628 aa17.6■□□□□ 0.41
LRCH3-208ENST00000443727 B3GALT5Q9Y2C3 310 aa17.6■□□□□ 0.41
LRCH3-208ENST00000443727 A0A087WUJ7 227 aa17.59■□□□□ 0.41
LRCH3-208ENST00000443727 A0A0B4J2E0 115 aa17.59■□□□□ 0.41
LRCH3-208ENST00000443727 A0A1B0GX12 115 aa17.59■□□□□ 0.41
LRCH3-208ENST00000443727 M0R3H8 397 aa17.59■□□□□ 0.41
LRCH3-208ENST00000443727 SLC43A1O75387 559 aa17.59■□□□□ 0.41
LRCH3-208ENST00000443727 PTNP21246 168 aa17.59■□□□□ 0.41
LRCH3-208ENST00000443727 CDH12P55289 794 aa17.59■□□□□ 0.41
LRCH3-208ENST00000443727 UBE2NP61088 152 aaKnown RBP17.59■□□□□ 0.41
LRCH3-208ENST00000443727 LTBQ06643 244 aa17.59■□□□□ 0.41
LRCH3-208ENST00000443727 TRMT5Q32P41 509 aaKnown RBP17.59■□□□□ 0.41
LRCH3-208ENST00000443727 INTS11Q5TA45 600 aaKnown RBP17.59■□□□□ 0.41
LRCH3-208ENST00000443727 HS6ST2Q96MM7 605 aa17.59■□□□□ 0.41
LRCH3-208ENST00000443727 SH3GL1Q99961 368 aa17.59■□□□□ 0.41
LRCH3-208ENST00000443727 DHRS9Q9BPW9 319 aa17.59■□□□□ 0.41
LRCH3-208ENST00000443727 WFDC6Q9BQY6 131 aa17.59■□□□□ 0.41
LRCH3-208ENST00000443727 TRAF4Q9BUZ4 470 aaPredicted RBP17.59■□□□□ 0.41
LRCH3-208ENST00000443727 ASPNQ9BXN1 380 aa17.59■□□□□ 0.41
LRCH3-208ENST00000443727 RCE1Q9Y256 329 aa17.59■□□□□ 0.41
LRCH3-208ENST00000443727 ATP23Q9Y6H3 246 aa17.59■□□□□ 0.41
LRCH3-208ENST00000443727 E7EQL1 145 aa17.58■□□□□ 0.4
LRCH3-208ENST00000443727 FBP2O00757 339 aa17.58■□□□□ 0.4
LRCH3-208ENST00000443727 AKAP8O43823 692 aaKnown RBP17.58■□□□□ 0.4
LRCH3-208ENST00000443727 UPK3AO75631 287 aa17.58■□□□□ 0.4
LRCH3-208ENST00000443727 C8BP07358 591 aa17.58■□□□□ 0.4
LRCH3-208ENST00000443727 PCGF2P35227 344 aa17.58■□□□□ 0.4
LRCH3-208ENST00000443727 FABP6P51161 128 aa17.58■□□□□ 0.4
LRCH3-208ENST00000443727 SLC25A3Q00325 362 aa17.58■□□□□ 0.4
LRCH3-208ENST00000443727 ROR2Q01974 943 aaKnown RBP17.58■□□□□ 0.4
LRCH3-208ENST00000443727 VEZF1Q14119 521 aa17.58■□□□□ 0.4
LRCH3-208ENST00000443727 MAPRE2Q15555 327 aa17.58■□□□□ 0.4
LRCH3-208ENST00000443727 ETFDHQ16134 617 aa17.58■□□□□ 0.4
LRCH3-208ENST00000443727 DUSP7Q16829 419 aa17.58■□□□□ 0.4
LRCH3-208ENST00000443727 CLEC12BQ2HXU8 276 aa17.58■□□□□ 0.4
LRCH3-208ENST00000443727 SWT1Q5T5J6 900 aaKnown RBP17.58■□□□□ 0.4
LRCH3-208ENST00000443727 FBXL14Q8N1E6 418 aa17.58■□□□□ 0.4
LRCH3-208ENST00000443727 GPR137CQ8N3F9 429 aa17.58■□□□□ 0.4
LRCH3-208ENST00000443727 OR1K1Q8NGR3 316 aa17.58■□□□□ 0.4
LRCH3-208ENST00000443727 VANGL1Q8TAA9 524 aaPredicted RBP17.58■□□□□ 0.4
LRCH3-208ENST00000443727 OBP2BQ9NPH6 170 aa17.58■□□□□ 0.4
LRCH3-208ENST00000443727 ZNF446Q9NWS9 450 aa17.58■□□□□ 0.4
LRCH3-208ENST00000443727 CORINQ9Y5Q5 1042 aa17.58■□□□□ 0.4
LRCH3-208ENST00000443727 TPST2O60704 377 aa17.57■□□□□ 0.4
LRCH3-208ENST00000443727 FMO6PO60774 539 aa17.57■□□□□ 0.4
LRCH3-208ENST00000443727 LY6G6DO95868 133 aa17.57■□□□□ 0.4
LRCH3-208ENST00000443727 CD8AP01732 235 aa17.57■□□□□ 0.4
LRCH3-208ENST00000443727 HEXAP06865 529 aa17.57■□□□□ 0.4
LRCH3-208ENST00000443727 TTKP33981 857 aa17.57■□□□□ 0.4
LRCH3-208ENST00000443727 SH3BGRP55822 239 aaPredicted RBP17.57■□□□□ 0.4
LRCH3-208ENST00000443727 PMS2P3Q13401 168 aa17.57■□□□□ 0.4
LRCH3-208ENST00000443727 TBRG1Q3YBR2 411 aa17.57■□□□□ 0.4
LRCH3-208ENST00000443727 NANOGP8Q6NSW7 305 aa17.57■□□□□ 0.4
LRCH3-208ENST00000443727 ZNF613Q6PF04 617 aa17.57■□□□□ 0.4
LRCH3-208ENST00000443727 DTX2Q86UW9 622 aa17.57■□□□□ 0.4
LRCH3-208ENST00000443727 UEVLDQ8IX04 471 aa17.57■□□□□ 0.4
LRCH3-208ENST00000443727 OR6S1Q8NH40 331 aa17.57■□□□□ 0.4
LRCH3-208ENST00000443727 LRRC58Q96CX6 371 aa17.57■□□□□ 0.4
LRCH3-208ENST00000443727 POM121Q96HA1 1249 aa17.57■□□□□ 0.4
LRCH3-208ENST00000443727 ARHGDIGQ99819 225 aa17.57■□□□□ 0.4
LRCH3-208ENST00000443727 KCNS3Q9BQ31 491 aa17.57■□□□□ 0.4
LRCH3-208ENST00000443727 ECSITQ9BQ95 431 aa17.57■□□□□ 0.4
LRCH3-208ENST00000443727 LINC00470Q9BZP3 86 aa17.57■□□□□ 0.4
LRCH3-208ENST00000443727 NANOGQ9H9S0 305 aa17.57■□□□□ 0.4
LRCH3-208ENST00000443727 B3GAT1Q9P2W7 334 aa17.57■□□□□ 0.4
LRCH3-208ENST00000443727 A0A096LPE4 126 aa17.56■□□□□ 0.4
LRCH3-208ENST00000443727 A0A1W2PPZ6 126 aa17.56■□□□□ 0.4
LRCH3-208ENST00000443727 CPSF4LA6NMK7 179 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms