RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 PIGWQ7Z7B1 504 aa20.82■□□□□ 0.92
VARS-217ENST00000440048 OXGR1Q96P68 337 aa20.82■□□□□ 0.92
VARS-217ENST00000440048 B3GAT1Q9P2W7 334 aa20.82■□□□□ 0.92
VARS-217ENST00000440048 SLC7A7Q9UM01 511 aa20.82■□□□□ 0.92
VARS-217ENST00000440048 RAI1Q7Z5J4 1906 aaPredicted RBP20.82■□□□□ 0.92
VARS-217ENST00000440048 PRRC2AP48634 2157 aaKnown RBP20.82■□□□□ 0.92
VARS-217ENST00000440048 OR5H1A6NKK0 313 aa20.81■□□□□ 0.92
VARS-217ENST00000440048 ZNF43P17038 809 aa20.81■□□□□ 0.92
VARS-217ENST00000440048 SELENOPP49908 381 aa20.81■□□□□ 0.92
VARS-217ENST00000440048 PPA1Q15181 289 aa20.81■□□□□ 0.92
VARS-217ENST00000440048 C9orf135Q5VTT2 229 aa20.81■□□□□ 0.92
VARS-217ENST00000440048 P2RY8Q86VZ1 359 aa20.81■□□□□ 0.92
VARS-217ENST00000440048 POMGNT2Q8NAT1 580 aa20.81■□□□□ 0.92
VARS-217ENST00000440048 ADPRHL1Q8NDY3 354 aa20.81■□□□□ 0.92
VARS-217ENST00000440048 MBD6Q96DN6 1003 aa20.81■□□□□ 0.92
VARS-217ENST00000440048 MUCL1Q96DR8 90 aa20.81■□□□□ 0.92
VARS-217ENST00000440048 SLC41A3Q96GZ6 507 aa20.81■□□□□ 0.92
VARS-217ENST00000440048 MOGAT1Q96PD6 335 aa20.81■□□□□ 0.92
VARS-217ENST00000440048 UBTD1Q9HAC8 227 aa20.81■□□□□ 0.92
VARS-217ENST00000440048 NGBQ9NPG2 151 aa20.81■□□□□ 0.92
VARS-217ENST00000440048 ARL2BPQ9Y2Y0 163 aa20.81■□□□□ 0.92
VARS-217ENST00000440048 CORINQ9Y5Q5 1042 aa20.81■□□□□ 0.92
VARS-217ENST00000440048 ALPK2Q86TB3 2170 aa20.8■□□□□ 0.92
VARS-217ENST00000440048 DSCAMO60469 2012 aa20.8■□□□□ 0.92
VARS-217ENST00000440048 C2CD3Q4AC94 2353 aa20.8■□□□□ 0.92
VARS-217ENST00000440048 LRRN3E7EW58 273 aa20.8■□□□□ 0.92
VARS-217ENST00000440048 SHOX2O60902 331 aaPredicted RBP20.8■□□□□ 0.92
VARS-217ENST00000440048 PLAUP00749 431 aa20.8■□□□□ 0.92
VARS-217ENST00000440048 OR1E2P47887 323 aa20.8■□□□□ 0.92
VARS-217ENST00000440048 GSK3BP49841 420 aa20.8■□□□□ 0.92
VARS-217ENST00000440048 CLDN17P56750 224 aa20.8■□□□□ 0.92
VARS-217ENST00000440048 PSME3P61289 254 aa20.8■□□□□ 0.92
VARS-217ENST00000440048 GABRA6Q16445 453 aa20.8■□□□□ 0.92
VARS-217ENST00000440048 NIPAL3Q6P499 406 aa20.8■□□□□ 0.92
VARS-217ENST00000440048 ZNF704Q6ZNC4 412 aaPredicted RBP20.8■□□□□ 0.92
VARS-217ENST00000440048 C10orf53Q8N6V4 93 aa20.8■□□□□ 0.92
VARS-217ENST00000440048 SCAIQ8N9R8 606 aa20.8■□□□□ 0.92
VARS-217ENST00000440048 TPD52L3Q96J77 140 aa20.8■□□□□ 0.92
VARS-217ENST00000440048 MPP4Q96JB8 637 aa20.8■□□□□ 0.92
VARS-217ENST00000440048 MUS81Q96NY9 551 aa20.8■□□□□ 0.92
VARS-217ENST00000440048 FOXC2Q99958 501 aa20.8■□□□□ 0.92
VARS-217ENST00000440048 TMEM204Q9BSN7 226 aa20.8■□□□□ 0.92
VARS-217ENST00000440048 ASPNQ9BXN1 380 aa20.8■□□□□ 0.92
VARS-217ENST00000440048 ALG2Q9H553 416 aa20.8■□□□□ 0.92
VARS-217ENST00000440048 LOC102725191A0A1B0GVB3 256 aa20.79■□□□□ 0.92
VARS-217ENST00000440048 MS4A18H0YCH9 400 aa20.79■□□□□ 0.92
VARS-217ENST00000440048 NQO1P15559 274 aaKnown RBP20.79■□□□□ 0.92
VARS-217ENST00000440048 CD53P19397 219 aa20.79■□□□□ 0.92
VARS-217ENST00000440048 SELENOWP63302 87 aa20.79■□□□□ 0.92
VARS-217ENST00000440048 IL1RL1Q01638 556 aa20.79■□□□□ 0.92
VARS-217ENST00000440048 LGALS3BPQ08380 585 aa20.79■□□□□ 0.92
VARS-217ENST00000440048 C1DQ13901 141 aaKnown RBP20.79■□□□□ 0.92
VARS-217ENST00000440048 ACKR1Q16570 336 aa20.79■□□□□ 0.92
VARS-217ENST00000440048 MS4A18Q3C1V0 323 aa20.79■□□□□ 0.92
VARS-217ENST00000440048 NCMAPQ5T1S8 102 aa20.79■□□□□ 0.92
VARS-217ENST00000440048 TTC33Q6PID6 262 aaPredicted RBP20.79■□□□□ 0.92
VARS-217ENST00000440048 DEF8Q6ZN54 512 aa20.79■□□□□ 0.92
VARS-217ENST00000440048 PRSS27Q9BQR3 290 aa20.79■□□□□ 0.92
VARS-217ENST00000440048 ZNF426Q9BUY5 554 aa20.79■□□□□ 0.92
VARS-217ENST00000440048 MRPL39Q9NYK5 338 aaKnown RBP20.79■□□□□ 0.92
VARS-217ENST00000440048 ABCD2Q9UBJ2 740 aa20.79■□□□□ 0.92
VARS-217ENST00000440048 CXCR6O00574 342 aa20.78■□□□□ 0.92
VARS-217ENST00000440048 NDUFAB1O14561 156 aa20.78■□□□□ 0.92
VARS-217ENST00000440048 GSTA4O15217 222 aa20.78■□□□□ 0.92
VARS-217ENST00000440048 HPRP00739 348 aa20.78■□□□□ 0.92
VARS-217ENST00000440048 MPGP29372 298 aa20.78■□□□□ 0.92
VARS-217ENST00000440048 PMS2P3Q13401 168 aa20.78■□□□□ 0.92
VARS-217ENST00000440048 OR7E24Q6IFN5 339 aa20.78■□□□□ 0.92
VARS-217ENST00000440048 SSX8Q7RTT4 187 aa20.78■□□□□ 0.92
VARS-217ENST00000440048 OR52N5Q8NH56 324 aa20.78■□□□□ 0.92
VARS-217ENST00000440048 AMBRA1Q9C0C7 1298 aa20.78■□□□□ 0.92
VARS-217ENST00000440048 POLR2J2Q9GZM3 115 aaKnown RBP20.78■□□□□ 0.92
VARS-217ENST00000440048 POLR2J3Q9H1A7 115 aaKnown RBP20.78■□□□□ 0.92
VARS-217ENST00000440048 CXXC4Q9H2H0 198 aa20.78■□□□□ 0.92
VARS-217ENST00000440048 ESRP2Q9H6T0 727 aaKnown RBP20.78■□□□□ 0.92
VARS-217ENST00000440048 RCE1Q9Y256 329 aa20.78■□□□□ 0.92
VARS-217ENST00000440048 DPRXA6NFQ7 191 aa20.77■□□□□ 0.92
VARS-217ENST00000440048 OR6C65A6NJZ3 312 aa20.77■□□□□ 0.92
VARS-217ENST00000440048 TRAF3IP2O43734 574 aaPredicted RBP20.77■□□□□ 0.92
VARS-217ENST00000440048 KRT33AO76009 404 aa20.77■□□□□ 0.92
VARS-217ENST00000440048 ZNF432O94892 652 aa20.77■□□□□ 0.92
VARS-217ENST00000440048 MT-ATP6P00846 226 aa20.77■□□□□ 0.92
VARS-217ENST00000440048 TAS2R41P59536 307 aa20.77■□□□□ 0.92
VARS-217ENST00000440048 PIN1Q13526 163 aaPredicted RBP20.77■□□□□ 0.92
VARS-217ENST00000440048 DEFB113Q30KQ7 82 aa20.77■□□□□ 0.92
VARS-217ENST00000440048 ABHD12BQ7Z5M8 362 aaPredicted RBP20.77■□□□□ 0.92
VARS-217ENST00000440048 C1orf162Q8NEQ5 155 aaPredicted RBP20.77■□□□□ 0.92
VARS-217ENST00000440048 KCTD14Q9BQ13 255 aaPredicted RBP20.77■□□□□ 0.92
VARS-217ENST00000440048 NPAP1Q9NZP6 1156 aa20.77■□□□□ 0.92
VARS-217ENST00000440048 RIMS3Q9UJD0 308 aa20.77■□□□□ 0.92
VARS-217ENST00000440048 SLC25A15Q9Y619 301 aa20.77■□□□□ 0.92
VARS-217ENST00000440048 A0A1W2PR80 420 aa20.76■□□□□ 0.91
VARS-217ENST00000440048 KPNA4O00629 521 aaPredicted RBP20.76■□□□□ 0.91
VARS-217ENST00000440048 PLPP3O14495 311 aa20.76■□□□□ 0.91
VARS-217ENST00000440048 UPK3AO75631 287 aa20.76■□□□□ 0.91
VARS-217ENST00000440048 OR5F1O95221 314 aa20.76■□□□□ 0.91
VARS-217ENST00000440048 CH25HO95992 272 aa20.76■□□□□ 0.91
VARS-217ENST00000440048 CD3EP07766 207 aa20.76■□□□□ 0.91
VARS-217ENST00000440048 HLA-DOBP13765 273 aa20.76■□□□□ 0.91
VARS-217ENST00000440048 TGFBR3Q03167 851 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms