RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 SLC25A38Q96DW6 304 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 WDR89Q96FK6 387 aaPredicted RBP12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 MAP3K3Q99759 626 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 PRTFDC1Q9NRG1 225 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 DZANK1Q9NVP4 752 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 CIB4A0PJX0 185 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 CDC14CA4D256 554 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 ZNF879B4DU55 563 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 FOXS1O43638 330 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 HPGDP15428 266 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 DNASE1P24855 282 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 ZP1P60852 638 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 UBE2IP63279 158 aaKnown RBP12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 RPL6Q02878 288 aaKnown RBP12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 LGALS3BPQ08380 585 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 LGALSLQ3ZCW2 172 aaPredicted RBP12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 TEX261Q6UWH6 196 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 APOOLQ6UXV4 268 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 GRAMD2AQ8IUY3 354 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 SYS1Q8N2H4 156 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 TEX19Q8NA77 164 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 POMGNT2Q8NAT1 580 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 OR10AC1Q8NH08 325 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 C1orf216Q8TAB5 229 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 SMIM4Q8WVI0 70 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 C17orf50Q8WW18 174 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 RLN3Q8WXF3 142 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 SEC22CQ9BRL7 303 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 OR10A5Q9H207 317 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 IKZF2Q9UKS7 526 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 U3KQ87 197 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 IGKV1D-42A0A075B6H8 117 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 ELOA3DA6NLF2 546 aaPredicted RBP12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 LEUTXA8MZ59 168 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 TNFRSF10CO14798 259 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 KHDRBS3O75525 346 aaKnown RBP12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 SCO1O75880 301 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 SEMA4FO95754 770 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 HOXC4P09017 264 aaPredicted RBP12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 GABRG2P18507 467 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 GPR143P51810 404 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 CTXN1P60606 82 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 ELOA3BQ3SY89 546 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 LIPNQ5VXI9 398 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 SLC25A25Q6KCM7 469 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 DPY19L2P2Q6ZN68 376 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 MED25Q71SY5 747 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 SLITRK4Q8IW52 837 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 FAM109AQ8N4B1 249 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 FAM160A2Q8N612 972 aaPredicted RBP12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 ELOA3Q8NG57 546 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 OR11G2Q8NGC1 345 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 OR51A4Q8NGJ6 313 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 SYNPRQ8TBG9 265 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 ADAD1Q96M93 576 aaKnown RBP12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 OR2M2Q96R28 347 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 LMF2Q9BU23 707 aaKnown RBP12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 HRASLSQ9HDD0 168 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 COQ3Q9NZJ6 369 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 CYP8B1Q9UNU6 501 aa12.37□□□□□ -0.43
HERPUD1-204ENST00000439977 H0YC42 278 aa12.36□□□□□ -0.43
HERPUD1-204ENST00000439977 ARPC1BO15143 372 aaKnown RBP12.36□□□□□ -0.43
HERPUD1-204ENST00000439977 HRGP04196 525 aa12.36□□□□□ -0.43
HERPUD1-204ENST00000439977 DCTDP32321 178 aa12.36□□□□□ -0.43
HERPUD1-204ENST00000439977 EIF2B5Q13144 721 aaKnown RBP12.36□□□□□ -0.43
HERPUD1-204ENST00000439977 CAMK2DQ13557 499 aa12.36□□□□□ -0.43
HERPUD1-204ENST00000439977 CD276Q5ZPR3 534 aa12.36□□□□□ -0.43
HERPUD1-204ENST00000439977 BTN2A1Q7KYR7 527 aa12.36□□□□□ -0.43
HERPUD1-204ENST00000439977 GPBAR1Q8TDU6 330 aa12.36□□□□□ -0.43
HERPUD1-204ENST00000439977 RANBP3Q9H6Z4 567 aaPredicted RBP12.36□□□□□ -0.43
HERPUD1-204ENST00000439977 NANSQ9NR45 359 aa12.36□□□□□ -0.43
HERPUD1-204ENST00000439977 RXFP3Q9NSD7 469 aa12.36□□□□□ -0.43
HERPUD1-204ENST00000439977 WBP1LQ9NX94 342 aa12.36□□□□□ -0.43
HERPUD1-204ENST00000439977 ZNF281Q9Y2X9 895 aa12.36□□□□□ -0.43
HERPUD1-204ENST00000439977 VPS13AQ96RL7 3174 aa12.36□□□□□ -0.43
HERPUD1-204ENST00000439977 GATBO75879 557 aaKnown RBP12.36□□□□□ -0.43
HERPUD1-204ENST00000439977 FBXO45P0C2W1 286 aa12.36□□□□□ -0.43
HERPUD1-204ENST00000439977 THEGLP0DJG4 465 aa12.36□□□□□ -0.43
HERPUD1-204ENST00000439977 RNH1P13489 461 aaKnown RBP12.36□□□□□ -0.43
HERPUD1-204ENST00000439977 CCR9P51686 369 aa12.36□□□□□ -0.43
HERPUD1-204ENST00000439977 UBE2NLQ5JXB2 153 aa12.36□□□□□ -0.43
HERPUD1-204ENST00000439977 LINC01590Q5TEZ4 76 aa12.36□□□□□ -0.43
HERPUD1-204ENST00000439977 OVCH1Q7RTY7 1134 aa12.36□□□□□ -0.43
HERPUD1-204ENST00000439977 JAZF1Q86VZ6 243 aa12.36□□□□□ -0.43
HERPUD1-204ENST00000439977 LSM14AQ8ND56 463 aaKnown RBP12.36□□□□□ -0.43
HERPUD1-204ENST00000439977 GAL3ST1Q99999 423 aa12.36□□□□□ -0.43
HERPUD1-204ENST00000439977 NRSN2Q9GZP1 204 aa12.36□□□□□ -0.43
HERPUD1-204ENST00000439977 SYNDIG1Q9H7V2 258 aa12.36□□□□□ -0.43
HERPUD1-204ENST00000439977 EMC7Q9NPA0 242 aa12.36□□□□□ -0.43
HERPUD1-204ENST00000439977 DLL4Q9NR61 685 aa12.36□□□□□ -0.43
HERPUD1-204ENST00000439977 POLE3Q9NRF9 147 aa12.36□□□□□ -0.43
HERPUD1-204ENST00000439977 PPIEQ9UNP9 301 aaKnown RBP12.36□□□□□ -0.43
HERPUD1-204ENST00000439977 ZNF337Q9Y3M9 751 aa12.36□□□□□ -0.43
HERPUD1-204ENST00000439977 ZSCAN5BA6NJL1 495 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 NPIPB9F8W1W9 429 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 OR7A10O76100 309 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 WISP1O95388 367 aa12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 CFDP00746 253 aaPredicted RBP12.35□□□□□ -0.43
HERPUD1-204ENST00000439977 ANXA7P20073 488 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms