RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 DLSTP36957 453 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 GRK6P43250 576 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 RAG2P55895 527 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 TNFRSF17Q02223 184 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 BIKQ13323 160 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 ELAVL3Q14576 367 aaKnown RBP8.33□□□□□ -1.08
COPB1-202ENST00000439561 RGS7BPQ6MZT1 257 aaPredicted RBP8.33□□□□□ -1.08
COPB1-202ENST00000439561 ASPGQ86U10 573 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 CD163Q86VB7 1156 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 FOXRED2Q8IWF2 684 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 CDH26Q8IXH8 852 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 MUC20Q8N307 709 aaPredicted RBP8.33□□□□□ -1.08
COPB1-202ENST00000439561 JAGN1Q8N5M9 183 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 CCDC107Q8WV48 283 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 WNT2BQ93097 391 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 TMEM106AQ96A25 262 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 SRMSQ9H3Y6 488 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 PRSS16Q9NQE7 514 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 MBD2Q9UBB5 411 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 PCDHGA9Q9Y5G4 932 aaKnown RBP8.33□□□□□ -1.08
COPB1-202ENST00000439561 ATG2BQ96BY7 2078 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 PLSCR5A0PG75 271 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 C4orf51C9J302 202 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 AGPAT2O15120 278 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 BET1O15155 118 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 FADS1O60427 444 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 MTRF1O75570 445 aaKnown RBP8.32□□□□□ -1.08
COPB1-202ENST00000439561 ADH1CP00326 375 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 ARHGAP40Q5TG30 622 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 OVCH1Q7RTY7 1134 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 STEAP2Q8NFT2 490 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 OR14C36Q8NHC7 312 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 THAP6Q8TBB0 222 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 RERGQ96A58 199 aaPredicted RBP8.32□□□□□ -1.08
COPB1-202ENST00000439561 DEFB118Q96PH6 123 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 RSPH9Q9H1X1 276 aaPredicted RBP8.32□□□□□ -1.08
COPB1-202ENST00000439561 LDAHQ9H6V9 325 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 PRDM7Q9NQW5 492 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 CPNE7Q9UBL6 633 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 OR5V1Q9UGF6 321 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 ING1Q9UK53 422 aaPredicted RBP8.32□□□□□ -1.08
COPB1-202ENST00000439561 CA5BQ9Y2D0 317 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 PLXND1Q9Y4D7 1925 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 F5P12259 2224 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 TRAV1-2A0A0B4J238 106 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 MCIDASD6RGH6 385 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 GPR31O00270 319 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 ZFPL1O95159 310 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 RAB3DO95716 219 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 LDOC1O95751 146 aaPredicted RBP8.32□□□□□ -1.08
COPB1-202ENST00000439561 CD3DP04234 171 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 F13BP05160 661 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 CPMP14384 443 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 MAP3K8P41279 467 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 UBE2IP63279 158 aaKnown RBP8.32□□□□□ -1.08
COPB1-202ENST00000439561 SCRN3Q0VDG4 424 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 MESP2Q0VG99 397 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 ARMC10Q8N2F6 343 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 C12orf45Q8N5I9 185 aaPredicted RBP8.32□□□□□ -1.08
COPB1-202ENST00000439561 BMPERQ8N8U9 685 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 OR2L3Q8NG85 312 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 OR4D10Q8NGI6 311 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 OR52H1Q8NGJ2 320 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 ZNF707Q96C28 371 aaPredicted RBP8.32□□□□□ -1.08
COPB1-202ENST00000439561 MRGPRX3Q96LB0 322 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 NPAS1Q99742 590 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 ZNF649Q9BS31 505 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 EMC3Q9P0I2 261 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 UPB1Q9UBR1 384 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 OPN4Q9UHM6 478 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 FBXO4Q9UKT5 387 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 A0A0C4DFX4 3053 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 PLXNA3P51805 1871 aa8.32□□□□□ -1.08
COPB1-202ENST00000439561 A0A1W2PP55 124 aa8.31□□□□□ -1.08
COPB1-202ENST00000439561 PRRT4C9JH25 899 aa8.31□□□□□ -1.08
COPB1-202ENST00000439561 PRKNO60260 465 aaPredicted RBP8.31□□□□□ -1.08
COPB1-202ENST00000439561 LILRB5O75023 590 aa8.31□□□□□ -1.08
COPB1-202ENST00000439561 NDUFB6O95139 128 aa8.31□□□□□ -1.08
COPB1-202ENST00000439561 ZIC2O95409 532 aaPredicted RBP8.31□□□□□ -1.08
COPB1-202ENST00000439561 DCNP07585 359 aaKnown RBP8.31□□□□□ -1.08
COPB1-202ENST00000439561 CBR1P16152 277 aa8.31□□□□□ -1.08
COPB1-202ENST00000439561 ZNF10P21506 573 aaPredicted RBP8.31□□□□□ -1.08
COPB1-202ENST00000439561 CD34P28906 385 aa8.31□□□□□ -1.08
COPB1-202ENST00000439561 RPS15P62841 145 aaKnown RBP8.31□□□□□ -1.08
COPB1-202ENST00000439561 BAMBIQ13145 260 aa8.31□□□□□ -1.08
COPB1-202ENST00000439561 C2orf68Q2NKX9 166 aa8.31□□□□□ -1.08
COPB1-202ENST00000439561 PDSS1Q5T2R2 415 aa8.31□□□□□ -1.08
COPB1-202ENST00000439561 METRNLQ641Q3 311 aa8.31□□□□□ -1.08
COPB1-202ENST00000439561 ZNF626Q68DY1 528 aa8.31□□□□□ -1.08
COPB1-202ENST00000439561 MRM1Q6IN84 353 aaKnown RBP8.31□□□□□ -1.08
COPB1-202ENST00000439561 VITQ6UXI7 678 aa8.31□□□□□ -1.08
COPB1-202ENST00000439561 MRGPREQ86SM8 312 aa8.31□□□□□ -1.08
COPB1-202ENST00000439561 C12orf40Q86WS4 652 aa8.31□□□□□ -1.08
COPB1-202ENST00000439561 FAM71CQ8NEG0 241 aa8.31□□□□□ -1.08
COPB1-202ENST00000439561 BPIFCQ8NFQ6 507 aa8.31□□□□□ -1.08
COPB1-202ENST00000439561 ZNF75AQ96N20 296 aa8.31□□□□□ -1.08
COPB1-202ENST00000439561 VRK1Q99986 396 aaPredicted RBP8.31□□□□□ -1.08
COPB1-202ENST00000439561 POFUT1Q9H488 388 aa8.31□□□□□ -1.08
COPB1-202ENST00000439561 IL21RQ9HBE5 538 aa8.31□□□□□ -1.08
COPB1-202ENST00000439561 STARD5Q9NSY2 213 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms