RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 ZNF750Q32MQ0 723 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 TP53I3Q53FA7 332 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 LURAP1LQ8IV03 231 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 LNX2Q8N448 690 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 BPIFCQ8NFQ6 507 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 OR6K3Q8NGY3 331 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 PEX11GQ96HA9 241 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 OR14A2Q96R54 314 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 FERD3LQ96RJ6 166 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 NRTNQ99748 197 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 NRIP3Q9NQ35 241 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 EQTNQ9NQ60 294 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 TMEM74BQ9NUR3 256 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 MLXQ9UH92 298 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 PYCARD-AS1I3L0S3 204 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 PPM1DO15297 605 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 OGG1O15527 345 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 H2AFB1P0C5Y9 115 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 NOS3P29474 1203 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 PRKAR1BP31321 381 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 CAPZA2P47755 286 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 PTH2RP49190 550 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 P2RX1P51575 399 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 GMFBP60983 142 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 AGERQ15109 404 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 LPAL2Q16609 132 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 ZNF805Q5CZA5 627 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 C18orf63Q68DL7 685 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 OR4C11Q6IEV9 310 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 FCRLAQ7L513 359 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 CCDC116Q8IYX3 515 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 DNAAF1Q8NEP3 725 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 OR10K1Q8NGX5 313 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 HS6ST2Q96MM7 605 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 CD180Q99467 661 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 ZDHHC5Q9C0B5 715 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 OR2AG1Q9H205 316 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 PELI2Q9HAT8 420 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 FANCFQ9NPI8 374 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 CMC2Q9NRP2 79 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 SIDT1Q9NXL6 827 aaKnown RBP7.85□□□□□ -1.15
HPS4-206ENST00000439453 ADAM29Q9UKF5 820 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 CACNA1EQ15878 2313 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 A0A0A6YYD5 115 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 A0A1W2PP55 124 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 ANKRD61A6NGH8 418 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 F8W036 122 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 LINC01387J3KSC0 135 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 GOSR2O14653 212 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 MAGEB4O15481 346 aaPredicted RBP7.85□□□□□ -1.15
HPS4-206ENST00000439453 SULT1B1O43704 296 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 FMO6PO60774 539 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 LEFTY1O75610 366 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 IGHV4-34P06331 123 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 PTHLHP12272 177 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 MAKP20794 623 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 MAPK3P27361 379 aaPredicted RBP7.85□□□□□ -1.15
HPS4-206ENST00000439453 ACADLP28330 430 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 MPGP29372 298 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 ADPRHP54922 357 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 ST8SIA6P61647 398 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 FOXK2Q01167 660 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 CSRP2Q16527 193 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 ARSIQ5FYB1 569 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 FCRLBQ6BAA4 426 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 ZNF613Q6PF04 617 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 C11orf88Q6PI97 169 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 SLC36A1Q7Z2H8 476 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 TMEM17Q86X19 198 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 RFLNBQ8N5W9 214 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 TMIEQ8NEW7 156 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 OR56A1Q8NGH5 318 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 OR8K3Q8NH51 312 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 NSMAFQ92636 917 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 MFFQ9GZY8 342 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 SLC39A1Q9NY26 324 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 COA4Q9NYJ1 87 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 TAS2R3Q9NYW6 316 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 ASF1AQ9Y294 204 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 TSPAN11A1L157 253 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 PRSS44E7EML9 344 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 ZIC2O95409 532 aaPredicted RBP7.85□□□□□ -1.15
HPS4-206ENST00000439453 DPP4P27487 766 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 ARFIP1P53367 373 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 RPS11P62280 158 aaKnown RBP eCLIP7.85□□□□□ -1.15
HPS4-206ENST00000439453 TRA2BP62995 288 aaKnown RBP7.85□□□□□ -1.15
HPS4-206ENST00000439453 DUSP2Q05923 314 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 CDK5R1Q15078 307 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 POM121L1PQ3SYA9 428 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 DCAF12L2Q5VW00 463 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 LRRN1Q6UXK5 716 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 OR5AR1Q8NGP9 310 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 ORAI1Q96D31 301 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 SMIM19Q96E16 107 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 C6orf106Q9H6K1 298 aaPredicted RBP7.85□□□□□ -1.15
HPS4-206ENST00000439453 ANKRD10Q9NXR5 420 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 CALML5Q9NZT1 146 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 FOXJ3Q9UPW0 622 aa7.85□□□□□ -1.15
HPS4-206ENST00000439453 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.84□□□□□ -1.15
HPS4-206ENST00000439453 H7BY64 318 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms