RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 NXPE3Q969Y0 559 aa12.43□□□□□ -0.42
PCNX3-202ENST00000439247 INSM2Q96T92 566 aaPredicted RBP12.43□□□□□ -0.42
PCNX3-202ENST00000439247 GPN1Q9HCN4 374 aaPredicted RBP12.43□□□□□ -0.42
PCNX3-202ENST00000439247 SPHK1Q9NYA1 384 aa12.43□□□□□ -0.42
PCNX3-202ENST00000439247 GMEB2Q9UKD1 530 aa12.43□□□□□ -0.42
PCNX3-202ENST00000439247 GPR34Q9UPC5 381 aa12.43□□□□□ -0.42
PCNX3-202ENST00000439247 ZNF175Q9Y473 711 aa12.43□□□□□ -0.42
PCNX3-202ENST00000439247 ZNF780BQ9Y6R6 833 aa12.43□□□□□ -0.42
PCNX3-202ENST00000439247 TRPM6Q9BX84 2022 aa12.43□□□□□ -0.42
PCNX3-202ENST00000439247 RCBTB2O95199 551 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 SERPINA3P01011 423 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 RAB3AP20336 220 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 ITPKBP27987 946 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 TRA2BP62995 288 aaKnown RBP12.42□□□□□ -0.42
PCNX3-202ENST00000439247 PCGF3Q3KNV8 242 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 PRAMEF8Q5VWM4 474 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 PRAMEF7Q5VXH5 474 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 RANBP3LQ86VV4 465 aaPredicted RBP12.42□□□□□ -0.42
PCNX3-202ENST00000439247 OR4C16Q8NGL9 310 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 OR6K6Q8NGW6 343 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 NR4A3Q92570 626 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 TMPRSS13Q9BYE2 586 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 MFFQ9GZY8 342 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 ZNF768Q9H5H4 540 aaKnown RBP12.42□□□□□ -0.42
PCNX3-202ENST00000439247 CALML5Q9NZT1 146 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 MED11Q9P086 117 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 CLEC1BQ9P126 229 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 KCNK6Q9Y257 313 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 ZNF98A6NK75 572 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 F5H5P2 479 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 ZFPL1O95159 310 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 LAMP2P13473 410 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 TYRP1P17643 537 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 ART1P52961 327 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 TAS2R20P59543 309 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 MC2RQ01718 297 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 B3GNTL1Q67FW5 361 aaPredicted RBP12.42□□□□□ -0.42
PCNX3-202ENST00000439247 SLC36A1Q7Z2H8 476 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 SLC35F2Q8IXU6 374 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 S100A16Q96FQ6 103 aaKnown RBP12.42□□□□□ -0.42
PCNX3-202ENST00000439247 KRCC1Q9NPI7 259 aaPredicted RBP12.42□□□□□ -0.42
PCNX3-202ENST00000439247 DPP7Q9UHL4 492 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 GLS2Q9UI32 602 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 KLF15Q9UIH9 416 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 MYO15AQ9UKN7 3530 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 OTOL1A6NHN0 477 aaPredicted RBP12.42□□□□□ -0.42
PCNX3-202ENST00000439247 FGF19O95750 216 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 LDOC1O95751 146 aaPredicted RBP12.42□□□□□ -0.42
PCNX3-202ENST00000439247 SLC35G4P0C7Q5 338 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 ADRA2CP18825 462 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 DDX6P26196 483 aaKnown RBP eCLIP12.42□□□□□ -0.425e-6■■■■■ 44.3
PCNX3-202ENST00000439247 DLX5P56178 289 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 UBXN2BQ14CS0 331 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 ZIC1Q15915 447 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 PDSS1Q5T2R2 415 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 METRNLQ641Q3 311 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 LRRN1Q6UXK5 716 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 BAIAP2L2Q6UXY1 529 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 OR2AK2Q8NG84 335 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 TNFAIP8L1Q8WVP5 186 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 ZNF75AQ96N20 296 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 GAL3ST1Q99999 423 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 SPOCK3Q9BQ16 436 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 USB1Q9BQ65 265 aaKnown RBP12.42□□□□□ -0.42
PCNX3-202ENST00000439247 MRPS30Q9NP92 439 aaKnown RBP12.42□□□□□ -0.42
PCNX3-202ENST00000439247 PRELID3BQ9Y3B1 194 aa12.42□□□□□ -0.42
PCNX3-202ENST00000439247 PTP4A3O75365 173 aa12.41□□□□□ -0.42
PCNX3-202ENST00000439247 AP3S2P59780 193 aa12.41□□□□□ -0.42
PCNX3-202ENST00000439247 LGALS3BPQ08380 585 aa12.41□□□□□ -0.42
PCNX3-202ENST00000439247 OTPQ5XKR4 325 aa12.41□□□□□ -0.42
PCNX3-202ENST00000439247 OLFML2AQ68BL7 652 aa12.41□□□□□ -0.42
PCNX3-202ENST00000439247 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.41□□□□□ -0.42
PCNX3-202ENST00000439247 PXT1Q8NFP0 134 aa12.41□□□□□ -0.42
PCNX3-202ENST00000439247 ZNF514Q96K75 400 aaPredicted RBP12.41□□□□□ -0.42
PCNX3-202ENST00000439247 NMNAT3Q96T66 252 aa12.41□□□□□ -0.42
PCNX3-202ENST00000439247 TAS2R3Q9NYW6 316 aa12.41□□□□□ -0.42
PCNX3-202ENST00000439247 NCDNQ9UBB6 729 aa12.41□□□□□ -0.42
PCNX3-202ENST00000439247 FBXL3Q9UKT7 428 aa12.41□□□□□ -0.42
PCNX3-202ENST00000439247 ERVK-19Q9WJR5 959 aa12.41□□□□□ -0.42
PCNX3-202ENST00000439247 MED31Q9Y3C7 131 aa12.41□□□□□ -0.42
PCNX3-202ENST00000439247 IER3IP1Q9Y5U9 82 aa12.41□□□□□ -0.42
PCNX3-202ENST00000439247 V9GY05 133 aa12.41□□□□□ -0.42
PCNX3-202ENST00000439247 EML5Q05BV3 1969 aa12.41□□□□□ -0.42
PCNX3-202ENST00000439247 ZNF860A6NHJ4 632 aa12.41□□□□□ -0.42
PCNX3-202ENST00000439247 PRRT4C9JH25 899 aa12.41□□□□□ -0.42
PCNX3-202ENST00000439247 GPR31O00270 319 aa12.41□□□□□ -0.42
PCNX3-202ENST00000439247 KCNAB3O43448 404 aa12.41□□□□□ -0.42
PCNX3-202ENST00000439247 MAS1P04201 325 aa12.41□□□□□ -0.42
PCNX3-202ENST00000439247 ADRB3P13945 408 aa12.41□□□□□ -0.42
PCNX3-202ENST00000439247 CALCRP30988 508 aa12.41□□□□□ -0.42
PCNX3-202ENST00000439247 FHL1Q13642 323 aa12.41□□□□□ -0.42
PCNX3-202ENST00000439247 SERTAD2Q14140 314 aa12.41□□□□□ -0.42
PCNX3-202ENST00000439247 LRRC37A5PQ49AS3 106 aa12.41□□□□□ -0.42
PCNX3-202ENST00000439247 CDK20Q8IZL9 346 aa12.41□□□□□ -0.42
PCNX3-202ENST00000439247 OR2L5Q8NG80 312 aa12.41□□□□□ -0.42
PCNX3-202ENST00000439247 OR51S1Q8NGJ8 323 aa12.41□□□□□ -0.42
PCNX3-202ENST00000439247 DUSP19Q8WTR2 217 aa12.41□□□□□ -0.42
PCNX3-202ENST00000439247 PELOQ9BRX2 385 aaKnown RBP12.41□□□□□ -0.42
PCNX3-202ENST00000439247 ZNF275Q9NSD4 429 aaPredicted RBP12.41□□□□□ -0.42
PCNX3-202ENST00000439247 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms