RNA–Protein interactions for RNA: ENST00000438120.5

PTPRF-209, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRF, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-209ENST00000438120 SORDQ00796 357 aa15.9■□□□□ 0.14
PTPRF-209ENST00000438120 SLC36A2Q495M3 483 aa15.9■□□□□ 0.14
PTPRF-209ENST00000438120 SLC16A11Q8NCK7 471 aa15.9■□□□□ 0.14
PTPRF-209ENST00000438120 C6orf106Q9H6K1 298 aaPredicted RBP15.9■□□□□ 0.14
PTPRF-209ENST00000438120 SEC14L2O76054 403 aa15.9■□□□□ 0.14
PTPRF-209ENST00000438120 TK1P04183 234 aa15.9■□□□□ 0.14
PTPRF-209ENST00000438120 OMGP23515 440 aa15.9■□□□□ 0.14
PTPRF-209ENST00000438120 SHHQ15465 462 aa15.9■□□□□ 0.14
PTPRF-209ENST00000438120 AADACL3Q5VUY0 350 aa15.9■□□□□ 0.14
PTPRF-209ENST00000438120 RSPO2Q6UXX9 243 aaPredicted RBP15.9■□□□□ 0.14
PTPRF-209ENST00000438120 TPRA1Q86W33 373 aa15.9■□□□□ 0.14
PTPRF-209ENST00000438120 LAX1Q8IWV1 398 aa15.9■□□□□ 0.14
PTPRF-209ENST00000438120 ZFAND1Q8TCF1 268 aa15.9■□□□□ 0.14
PTPRF-209ENST00000438120 UBTD2Q8WUN7 234 aa15.9■□□□□ 0.14
PTPRF-209ENST00000438120 RASD2Q96D21 266 aa15.9■□□□□ 0.14
PTPRF-209ENST00000438120 SUCNR1Q9BXA5 334 aa15.9■□□□□ 0.14
PTPRF-209ENST00000438120 HRH4Q9H3N8 390 aa15.9■□□□□ 0.14
PTPRF-209ENST00000438120 ZNF286AQ9HBT8 521 aa15.9■□□□□ 0.14
PTPRF-209ENST00000438120 SIDT1Q9NXL6 827 aaKnown RBP15.9■□□□□ 0.14
PTPRF-209ENST00000438120 MDFIC2A0A1B0GVS7 189 aa15.9■□□□□ 0.14
PTPRF-209ENST00000438120 ITGB2P05107 769 aa15.9■□□□□ 0.14
PTPRF-209ENST00000438120 RPL35P42766 123 aaKnown RBP15.9■□□□□ 0.14
PTPRF-209ENST00000438120 FOXK2Q01167 660 aa15.9■□□□□ 0.14
PTPRF-209ENST00000438120 KIAA0907Q7Z7F0 614 aaPredicted RBP15.9■□□□□ 0.14
PTPRF-209ENST00000438120 SELENOIQ9C0D9 397 aa15.9■□□□□ 0.14
PTPRF-209ENST00000438120 TMEM184BQ9Y519 407 aaPredicted RBP15.9■□□□□ 0.14
PTPRF-209ENST00000438120 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.9■□□□□ 0.14
PTPRF-209ENST00000438120 GNB3P16520 340 aa15.9■□□□□ 0.14
PTPRF-209ENST00000438120 ELAVL4P26378 380 aaKnown RBP15.9■□□□□ 0.14
PTPRF-209ENST00000438120 PKLRP30613 574 aa15.9■□□□□ 0.14
PTPRF-209ENST00000438120 PTGER4P35408 488 aa15.9■□□□□ 0.14
PTPRF-209ENST00000438120 MRPL41Q8IXM3 137 aaKnown RBP15.9■□□□□ 0.14
PTPRF-209ENST00000438120 LILRA2Q8N149 483 aa15.9■□□□□ 0.14
PTPRF-209ENST00000438120 DMBX1Q8NFW5 382 aa15.9■□□□□ 0.14
PTPRF-209ENST00000438120 OR6T1Q8NGN1 323 aa15.9■□□□□ 0.14
PTPRF-209ENST00000438120 TMEM106AQ96A25 262 aa15.9■□□□□ 0.14
PTPRF-209ENST00000438120 CDCP1Q9H5V8 836 aa15.9■□□□□ 0.14
PTPRF-209ENST00000438120 TRAV36DV7A0A075B6V5 113 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 A0A1W2PPV4 95 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 TUSC2O75896 110 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 TPT1P13693 172 aaKnown RBP15.89■□□□□ 0.13
PTPRF-209ENST00000438120 C17orf67Q0P5P2 114 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 HEPHL1Q6MZM0 1159 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 SLC48A1Q6P1K1 146 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 ZNF836Q6ZNA1 936 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 PM20D2Q8IYS1 436 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 LGALS14Q8TCE9 139 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 MUL1Q969V5 352 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 PRMT8Q9NR22 394 aaPredicted RBP15.89■□□□□ 0.13
PTPRF-209ENST00000438120 MICAL3Q7RTP6 2002 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 A0A1B0GTW7 788 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 IL1AP01583 271 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 SLC35A1P78382 337 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 TATDN3Q17R31 274 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 HSF5Q4G112 596 aaPredicted RBP15.89■□□□□ 0.13
PTPRF-209ENST00000438120 ABHD17CQ6PCB6 329 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 TMEM207Q6UWW9 146 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 FGF22Q9HCT0 170 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 SLC23A2Q9UGH3 650 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 TNFRSF10AO00220 468 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 NXPH3O95157 252 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 MCCD1P59942 119 aaPredicted RBP15.89■□□□□ 0.13
PTPRF-209ENST00000438120 RRAS2P62070 204 aaPredicted RBP15.89■□□□□ 0.13
PTPRF-209ENST00000438120 PATE1Q8WXA2 126 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 OR1E3Q8WZA6 343 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 AMBRA1Q9C0C7 1298 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 KCNJ16Q9NPI9 418 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 RPA2P15927 270 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 ENPP1P22413 925 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 PGFP49763 221 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 HTD2P86397 168 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 MFAP5Q13361 173 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 ZNF767PQ75MW2 155 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 PFN4Q8NHR9 129 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 ZC3HAV1LQ96H79 300 aaKnown RBP15.89■□□□□ 0.13
PTPRF-209ENST00000438120 SPHK1Q9NYA1 384 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 A6NHS1 94 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 SLCO2B1O94956 709 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 TMEM52BQ4KMG9 183 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 SECTM1Q8WVN6 248 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 OR14A2Q96R54 314 aa15.89■□□□□ 0.13
PTPRF-209ENST00000438120 ZMAT3Q9HA38 289 aaKnown RBP15.89■□□□□ 0.13
PTPRF-209ENST00000438120 UBR2Q8IWV8 1755 aa15.88■□□□□ 0.13
PTPRF-209ENST00000438120 HTR2CP28335 458 aa15.88■□□□□ 0.13
PTPRF-209ENST00000438120 LIM2P55344 173 aa15.88■□□□□ 0.13
PTPRF-209ENST00000438120 HBMQ6B0K9 141 aa15.88■□□□□ 0.13
PTPRF-209ENST00000438120 SLC37A2Q8TED4 501 aa15.88■□□□□ 0.13
PTPRF-209ENST00000438120 MRPL38Q96DV4 380 aaKnown RBP15.88■□□□□ 0.13
PTPRF-209ENST00000438120 CENPOQ9BU64 300 aa15.88■□□□□ 0.13
PTPRF-209ENST00000438120 TMEM59Q9BXS4 323 aa15.88■□□□□ 0.13
PTPRF-209ENST00000438120 FOXQ1Q9C009 403 aa15.88■□□□□ 0.13
PTPRF-209ENST00000438120 GPR160Q9UJ42 338 aa15.88■□□□□ 0.13
PTPRF-209ENST00000438120 I6L893 689 aaPredicted RBP15.88■□□□□ 0.13
PTPRF-209ENST00000438120 PRAMEF4O60810 478 aa15.88■□□□□ 0.13
PTPRF-209ENST00000438120 GLSO94925 669 aaPredicted RBP15.88■□□□□ 0.13
PTPRF-209ENST00000438120 ABHD16AO95870 558 aa15.88■□□□□ 0.13
PTPRF-209ENST00000438120 SSX2Q16385 188 aa15.88■□□□□ 0.13
PTPRF-209ENST00000438120 WDSUB1Q8N9V3 476 aa15.88■□□□□ 0.13
PTPRF-209ENST00000438120 SGK3Q96BR1 496 aa15.88■□□□□ 0.13
PTPRF-209ENST00000438120 MRPS28Q9Y2Q9 187 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms