RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 TMED7-TICAM2A0A0A6YYA0 188 aa23.32■■□□□ 1.32
CPNE1-216ENST00000437340 J3QLW9 94 aa23.32■■□□□ 1.32
CPNE1-216ENST00000437340 CASKO14936 926 aa23.32■■□□□ 1.32
CPNE1-216ENST00000437340 ZFAND5O76080 213 aa23.32■■□□□ 1.32
CPNE1-216ENST00000437340 ZNF19P17023 458 aa23.32■■□□□ 1.32
CPNE1-216ENST00000437340 TGM1P22735 817 aa23.32■■□□□ 1.32
CPNE1-216ENST00000437340 CDKN2AP42771 156 aaKnown RBP23.32■■□□□ 1.32
CPNE1-216ENST00000437340 SUMO3P55854 103 aaPredicted RBP23.32■■□□□ 1.32
CPNE1-216ENST00000437340 STK35Q8TDR2 534 aa23.32■■□□□ 1.32
CPNE1-216ENST00000437340 DCLRE1CQ96SD1 692 aaKnown RBP23.32■■□□□ 1.32
CPNE1-216ENST00000437340 ABCB10Q9NRK6 738 aa23.32■■□□□ 1.32
CPNE1-216ENST00000437340 RXFP3Q9NSD7 469 aa23.32■■□□□ 1.32
CPNE1-216ENST00000437340 GRHPRQ9UBQ7 328 aa23.32■■□□□ 1.32
CPNE1-216ENST00000437340 TMED7Q9Y3B3 224 aa23.32■■□□□ 1.32
CPNE1-216ENST00000437340 ANKUB1A6NFN9 424 aa23.31■■□□□ 1.32
CPNE1-216ENST00000437340 A8MVM7 634 aa23.31■■□□□ 1.32
CPNE1-216ENST00000437340 CDX4O14627 284 aaPredicted RBP23.31■■□□□ 1.32
CPNE1-216ENST00000437340 TBX1O43435 398 aa23.31■■□□□ 1.32
CPNE1-216ENST00000437340 SUSD5O60279 629 aa23.31■■□□□ 1.32
CPNE1-216ENST00000437340 ZNF354AO60765 605 aaPredicted RBP23.31■■□□□ 1.32
CPNE1-216ENST00000437340 GP1BAP07359 652 aa23.31■■□□□ 1.32
CPNE1-216ENST00000437340 FBXW4P57775 412 aa23.31■■□□□ 1.32
CPNE1-216ENST00000437340 OR12D2P58182 307 aa23.31■■□□□ 1.32
CPNE1-216ENST00000437340 MC2RQ01718 297 aa23.31■■□□□ 1.32
CPNE1-216ENST00000437340 HSF2Q03933 536 aa23.31■■□□□ 1.32
CPNE1-216ENST00000437340 COL28A1Q2UY09 1125 aa23.31■■□□□ 1.32
CPNE1-216ENST00000437340 C16orf47Q6ZP98 133 aaPredicted RBP23.31■■□□□ 1.32
CPNE1-216ENST00000437340 MAMDC2Q7Z304 686 aaPredicted RBP23.31■■□□□ 1.32
CPNE1-216ENST00000437340 ADGRG3Q86Y34 549 aa23.31■■□□□ 1.32
CPNE1-216ENST00000437340 ZPLD1Q8TCW7 415 aa23.31■■□□□ 1.32
CPNE1-216ENST00000437340 ST8SIA1Q92185 356 aa23.31■■□□□ 1.32
CPNE1-216ENST00000437340 LRFN3Q9BTN0 628 aa23.31■■□□□ 1.32
CPNE1-216ENST00000437340 MPDZO75970 2070 aa23.31■■□□□ 1.32
CPNE1-216ENST00000437340 FLRT2O43155 660 aa23.3■■□□□ 1.32
CPNE1-216ENST00000437340 KLK3P07288 261 aaPredicted RBP23.3■■□□□ 1.32
CPNE1-216ENST00000437340 TMED10P49755 219 aaKnown RBP23.3■■□□□ 1.32
CPNE1-216ENST00000437340 CDONQ4KMG0 1287 aa23.3■■□□□ 1.32
CPNE1-216ENST00000437340 FAM69AQ5T7M9 428 aa23.3■■□□□ 1.32
CPNE1-216ENST00000437340 SSX6Q7RTT6 188 aa23.3■■□□□ 1.32
CPNE1-216ENST00000437340 EXD3Q8N9H8 876 aa23.3■■□□□ 1.32
CPNE1-216ENST00000437340 OR51L1Q8NGJ5 315 aa23.3■■□□□ 1.32
CPNE1-216ENST00000437340 THAP3Q8WTV1 239 aaPredicted RBP23.3■■□□□ 1.32
CPNE1-216ENST00000437340 ASB15Q8WXK1 588 aa23.3■■□□□ 1.32
CPNE1-216ENST00000437340 PTDSS2Q9BVG9 487 aa23.3■■□□□ 1.32
CPNE1-216ENST00000437340 CFL1P23528 166 aaKnown RBP23.29■■□□□ 1.32
CPNE1-216ENST00000437340 TGM4P49221 684 aa23.29■■□□□ 1.32
CPNE1-216ENST00000437340 DLX5P56178 289 aa23.29■■□□□ 1.32
CPNE1-216ENST00000437340 SPEM2Q0P670 501 aa23.29■■□□□ 1.32
CPNE1-216ENST00000437340 SGCBQ16585 318 aa23.29■■□□□ 1.32
CPNE1-216ENST00000437340 LINC01590Q5TEZ4 76 aa23.29■■□□□ 1.32
CPNE1-216ENST00000437340 DMKNQ6E0U4 476 aaPredicted RBP23.29■■□□□ 1.32
CPNE1-216ENST00000437340 ZNRF4Q8WWF5 429 aa23.29■■□□□ 1.32
CPNE1-216ENST00000437340 ETAA1Q9NY74 926 aa23.29■■□□□ 1.32
CPNE1-216ENST00000437340 GPN3Q9UHW5 284 aaPredicted RBP23.29■■□□□ 1.32
CPNE1-216ENST00000437340 TMEM72A0PK05 275 aa23.29■■□□□ 1.32
CPNE1-216ENST00000437340 CD8B2A6NJW9 211 aa23.29■■□□□ 1.32
CPNE1-216ENST00000437340 E9PI62 339 aa23.29■■□□□ 1.32
CPNE1-216ENST00000437340 LDOC1O95751 146 aaPredicted RBP23.29■■□□□ 1.32
CPNE1-216ENST00000437340 F13BP05160 661 aa23.29■■□□□ 1.32
CPNE1-216ENST00000437340 CD8BP10966 210 aa23.29■■□□□ 1.32
CPNE1-216ENST00000437340 MTNR1BP49286 362 aa23.29■■□□□ 1.32
CPNE1-216ENST00000437340 DDI2Q5TDH0 399 aa23.29■■□□□ 1.32
CPNE1-216ENST00000437340 POMZP3Q6PJE2 187 aa23.29■■□□□ 1.32
CPNE1-216ENST00000437340 ARL9Q6T311 187 aa23.29■■□□□ 1.32
CPNE1-216ENST00000437340 OR6K6Q8NGW6 343 aa23.29■■□□□ 1.32
CPNE1-216ENST00000437340 OR6S1Q8NH40 331 aa23.29■■□□□ 1.32
CPNE1-216ENST00000437340 RHBDD1Q8TEB9 315 aa23.29■■□□□ 1.32
CPNE1-216ENST00000437340 SMAP2Q8WU79 429 aaPredicted RBP23.29■■□□□ 1.32
CPNE1-216ENST00000437340 TSPAN32Q96QS1 320 aa23.29■■□□□ 1.32
CPNE1-216ENST00000437340 ALG12Q9BV10 488 aa23.29■■□□□ 1.32
CPNE1-216ENST00000437340 MYOTQ9UBF9 498 aa23.29■■□□□ 1.32
CPNE1-216ENST00000437340 LOC102723996A0A087X1L8 192 aa23.28■■□□□ 1.32
CPNE1-216ENST00000437340 NAA10P41227 235 aaPredicted RBP23.28■■□□□ 1.32
CPNE1-216ENST00000437340 KRR1Q13601 381 aaKnown RBP23.28■■□□□ 1.32
CPNE1-216ENST00000437340 C1orf140Q5VVS0 124 aa23.28■■□□□ 1.32
CPNE1-216ENST00000437340 STEAP3Q658P3 488 aa23.28■■□□□ 1.32
CPNE1-216ENST00000437340 LAX1Q8IWV1 398 aa23.28■■□□□ 1.32
CPNE1-216ENST00000437340 MS4A15Q8N5U1 240 aa23.28■■□□□ 1.32
CPNE1-216ENST00000437340 OR5J2Q8NH18 312 aa23.28■■□□□ 1.32
CPNE1-216ENST00000437340 ATOH1Q92858 354 aaPredicted RBP23.28■■□□□ 1.32
CPNE1-216ENST00000437340 C8orf44Q96CB5 159 aa23.28■■□□□ 1.32
CPNE1-216ENST00000437340 SP140LQ9H930 580 aa23.28■■□□□ 1.32
CPNE1-216ENST00000437340 AKIRIN1Q9H9L7 192 aaPredicted RBP23.28■■□□□ 1.32
CPNE1-216ENST00000437340 RPRD1BQ9NQG5 326 aaKnown RBP23.28■■□□□ 1.32
CPNE1-216ENST00000437340 TAS2R5Q9NYW4 299 aa23.28■■□□□ 1.32
CPNE1-216ENST00000437340 COL27A1Q8IZC6 1860 aaPredicted RBP23.27■■□□□ 1.32
CPNE1-216ENST00000437340 OR2T1O43869 369 aa23.27■■□□□ 1.32
CPNE1-216ENST00000437340 CD1AP06126 327 aa23.27■■□□□ 1.32
CPNE1-216ENST00000437340 CD59P13987 128 aa23.27■■□□□ 1.32
CPNE1-216ENST00000437340 ACP1P24666 158 aa23.27■■□□□ 1.32
CPNE1-216ENST00000437340 PYCR1P32322 319 aa23.27■■□□□ 1.32
CPNE1-216ENST00000437340 GBX2P52951 348 aaPredicted RBP23.27■■□□□ 1.32
CPNE1-216ENST00000437340 C1QL3Q5VWW1 255 aa23.27■■□□□ 1.32
CPNE1-216ENST00000437340 EGFL6Q8IUX8 553 aa23.27■■□□□ 1.32
CPNE1-216ENST00000437340 SLC22A8Q8TCC7 542 aa23.27■■□□□ 1.32
CPNE1-216ENST00000437340 SNX33Q8WV41 574 aa23.27■■□□□ 1.32
CPNE1-216ENST00000437340 EDEM2Q9BV94 578 aa23.27■■□□□ 1.32
CPNE1-216ENST00000437340 ABCB9Q9NP78 766 aa23.27■■□□□ 1.32
CPNE1-216ENST00000437340 ST6GALNAC2Q9UJ37 374 aa23.27■■□□□ 1.32
CPNE1-216ENST00000437340 V9GYH0 126 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms