RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 C1orf140Q5VVS0 124 aa19.1■□□□□ 0.65
PTPRF-207ENST00000436724 GLRX5Q86SX6 157 aa19.1■□□□□ 0.65
PTPRF-207ENST00000436724 ATCAYQ86WG3 371 aa19.1■□□□□ 0.65
PTPRF-207ENST00000436724 CADM3Q8N126 398 aa19.1■□□□□ 0.65
PTPRF-207ENST00000436724 ESX1Q8N693 406 aa19.1■□□□□ 0.65
PTPRF-207ENST00000436724 ATP6V1C2Q8NEY4 427 aa19.1■□□□□ 0.65
PTPRF-207ENST00000436724 NLGN4YQ8NFZ3 816 aaPredicted RBP19.1■□□□□ 0.65
PTPRF-207ENST00000436724 TM9SF4Q92544 642 aa19.1■□□□□ 0.65
PTPRF-207ENST00000436724 GPX7Q96SL4 187 aaPredicted RBP19.1■□□□□ 0.65
PTPRF-207ENST00000436724 CHCHD6Q9BRQ6 235 aa19.1■□□□□ 0.65
PTPRF-207ENST00000436724 FKRPQ9H9S5 495 aa19.1■□□□□ 0.65
PTPRF-207ENST00000436724 POLE4Q9NR33 117 aa19.1■□□□□ 0.65
PTPRF-207ENST00000436724 P4HTMQ9NXG6 502 aa19.1■□□□□ 0.65
PTPRF-207ENST00000436724 ZNF229Q9UJW7 825 aa19.1■□□□□ 0.65
PTPRF-207ENST00000436724 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.1■□□□□ 0.65
PTPRF-207ENST00000436724 CCRL2O00421 344 aa19.1■□□□□ 0.65
PTPRF-207ENST00000436724 ARPC3O15145 178 aa19.1■□□□□ 0.65
PTPRF-207ENST00000436724 SSR4P51571 173 aa19.1■□□□□ 0.65
PTPRF-207ENST00000436724 FOXK1P85037 733 aa19.1■□□□□ 0.65
PTPRF-207ENST00000436724 C1DQ13901 141 aaKnown RBP19.1■□□□□ 0.65
PTPRF-207ENST00000436724 OPN5Q6U736 354 aa19.1■□□□□ 0.65
PTPRF-207ENST00000436724 FAM122BQ7Z309 247 aa19.1■□□□□ 0.65
PTPRF-207ENST00000436724 SLC22A16Q86VW1 577 aa19.1■□□□□ 0.65
PTPRF-207ENST00000436724 ZBTB8BQ8NAP8 495 aaPredicted RBP19.1■□□□□ 0.65
PTPRF-207ENST00000436724 ZNRF4Q8WWF5 429 aa19.1■□□□□ 0.65
PTPRF-207ENST00000436724 ST8SIA1Q92185 356 aa19.1■□□□□ 0.65
PTPRF-207ENST00000436724 ANKRD10Q9NXR5 420 aa19.1■□□□□ 0.65
PTPRF-207ENST00000436724 QPCTLQ9NXS2 382 aa19.1■□□□□ 0.65
PTPRF-207ENST00000436724 EXOSC1Q9Y3B2 195 aaKnown RBP19.1■□□□□ 0.65
PTPRF-207ENST00000436724 CNOT1A5YKK6 2376 aaKnown RBP19.09■□□□□ 0.65
PTPRF-207ENST00000436724 PNMA8CA0A1B0GUJ8 204 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 OR6C68A6NDL8 312 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 J3QRE1 110 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 TP53I11O14683 189 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 IGHA1P01876 353 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 HIST1H2ABP04908 130 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 IMPDH2P12268 514 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 IL11P20809 199 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 SUMO3P55854 103 aaPredicted RBP19.09■□□□□ 0.65
PTPRF-207ENST00000436724 WNT4P56705 351 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 FAM69AQ5T7M9 428 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 B3GNTL1Q67FW5 361 aaPredicted RBP19.09■□□□□ 0.65
PTPRF-207ENST00000436724 HIST3H2AQ7L7L0 130 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 TMEM99Q8N816 258 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 WDSUB1Q8N9V3 476 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 NPEPL1Q8NDH3 523 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 KBTBD8Q8NFY9 601 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 HIST1H2ACQ93077 130 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 ARL5BQ96KC2 179 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 C6orf62Q9GZU0 229 aaPredicted RBP19.09■□□□□ 0.65
PTPRF-207ENST00000436724 MED12Q93074 2177 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 LOC101059948A0A1B0GTJ6 334 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 TMEM129A0AVI4 362 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 SLC22A31A6NKX4 558 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 C11orf98E9PRG8 122 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 G3V3Y1 287 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 TAF4O00268 1085 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 LRP3O75074 770 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 CD14P08571 375 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 FTH1P19P0C7X4 201 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 CCL3P10147 92 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 MLF1P58340 268 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 LIPKQ5VXJ0 399 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 TUBA3EQ6PEY2 450 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 TMEM156Q8N614 296 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 SDHAF3Q9NRP4 125 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 ERVK13-1Q9NX77 482 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 TAS2R5Q9NYW4 299 aa19.09■□□□□ 0.65
PTPRF-207ENST00000436724 CCDC59Q9P031 241 aaKnown RBP19.09■□□□□ 0.65
PTPRF-207ENST00000436724 C12orf71A8MTZ7 269 aa19.08■□□□□ 0.65
PTPRF-207ENST00000436724 LRRTM2O43300 516 aa19.08■□□□□ 0.65
PTPRF-207ENST00000436724 UPK1BO75841 260 aa19.08■□□□□ 0.65
PTPRF-207ENST00000436724 TSPAN19P0C672 248 aa19.08■□□□□ 0.65
PTPRF-207ENST00000436724 CDKN2AP42771 156 aaKnown RBP19.08■□□□□ 0.65
PTPRF-207ENST00000436724 HTR3AP46098 478 aa19.08■□□□□ 0.65
PTPRF-207ENST00000436724 ZNF41P51814 821 aaPredicted RBP19.08■□□□□ 0.65
PTPRF-207ENST00000436724 CBX3Q13185 183 aa19.08■□□□□ 0.65
PTPRF-207ENST00000436724 AGAP7PQ5VUJ5 663 aa19.08■□□□□ 0.65
PTPRF-207ENST00000436724 SLC6A19Q695T7 634 aa19.08■□□□□ 0.65
PTPRF-207ENST00000436724 LYSMD2Q8IV50 215 aa19.08■□□□□ 0.65
PTPRF-207ENST00000436724 LSM14AQ8ND56 463 aaKnown RBP19.08■□□□□ 0.65
PTPRF-207ENST00000436724 OR5M1Q8NGP8 315 aa19.08■□□□□ 0.65
PTPRF-207ENST00000436724 DDOQ99489 341 aa19.08■□□□□ 0.65
PTPRF-207ENST00000436724 ASB6Q9NWX5 421 aa19.08■□□□□ 0.65
PTPRF-207ENST00000436724 KLHL21Q9UJP4 597 aa19.08■□□□□ 0.65
PTPRF-207ENST00000436724 IGLV3-32A0A0A0MS00 114 aa19.08■□□□□ 0.64
PTPRF-207ENST00000436724 EFNA2O43921 213 aa19.08■□□□□ 0.64
PTPRF-207ENST00000436724 LALBAP00709 142 aa19.08■□□□□ 0.64
PTPRF-207ENST00000436724 PLPPR5Q32ZL2 321 aa19.08■□□□□ 0.64
PTPRF-207ENST00000436724 ZNF485Q8NCK3 441 aa19.08■□□□□ 0.64
PTPRF-207ENST00000436724 OR2M3Q8NG83 312 aa19.08■□□□□ 0.64
PTPRF-207ENST00000436724 ZMYND19Q96E35 227 aaPredicted RBP19.08■□□□□ 0.64
PTPRF-207ENST00000436724 ADGRL4Q9HBW9 690 aa19.08■□□□□ 0.64
PTPRF-207ENST00000436724 ABCB10Q9NRK6 738 aa19.08■□□□□ 0.64
PTPRF-207ENST00000436724 CNTRLQ7Z7A1 2325 aa19.07■□□□□ 0.64
PTPRF-207ENST00000436724 H3BML4 177 aa19.07■□□□□ 0.64
PTPRF-207ENST00000436724 TERTO14746 1132 aaKnown RBP19.07■□□□□ 0.64
PTPRF-207ENST00000436724 RAD1O60671 282 aa19.07■□□□□ 0.64
PTPRF-207ENST00000436724 HPP00738 406 aa19.07■□□□□ 0.64
PTPRF-207ENST00000436724 GRPRP30550 384 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms