RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 SPATA19Q7Z5L4 167 aa9.49□□□□□ -0.89
SPTLC1P4-201ENST00000435997 SERPINA11Q86U17 422 aa9.49□□□□□ -0.89
SPTLC1P4-201ENST00000435997 CLIP4Q8N3C7 705 aa9.49□□□□□ -0.89
SPTLC1P4-201ENST00000435997 ZNF540Q8NDQ6 660 aa9.49□□□□□ -0.89
SPTLC1P4-201ENST00000435997 OR4F15Q8NGB8 312 aa9.49□□□□□ -0.89
SPTLC1P4-201ENST00000435997 MFSD8Q8NHS3 518 aa9.49□□□□□ -0.89
SPTLC1P4-201ENST00000435997 STK35Q8TDR2 534 aa9.49□□□□□ -0.89
SPTLC1P4-201ENST00000435997 VPS33AQ96AX1 596 aa9.49□□□□□ -0.89
SPTLC1P4-201ENST00000435997 C1orf159Q96HA4 380 aa9.49□□□□□ -0.89
SPTLC1P4-201ENST00000435997 MAELQ96JY0 434 aaKnown RBP9.49□□□□□ -0.89
SPTLC1P4-201ENST00000435997 DOK1Q99704 481 aa9.49□□□□□ -0.89
SPTLC1P4-201ENST00000435997 TAPBPLQ9BX59 468 aa9.49□□□□□ -0.89
SPTLC1P4-201ENST00000435997 CALML5Q9NZT1 146 aa9.49□□□□□ -0.89
SPTLC1P4-201ENST00000435997 NBEAL1Q6ZS30 2694 aa9.49□□□□□ -0.89
SPTLC1P4-201ENST00000435997 A0A096LPE4 126 aa9.48□□□□□ -0.89
SPTLC1P4-201ENST00000435997 IGHV2OR16-5A0A0B4J2B6 119 aa9.48□□□□□ -0.89
SPTLC1P4-201ENST00000435997 A0A1W2PPZ6 126 aa9.48□□□□□ -0.89
SPTLC1P4-201ENST00000435997 TMEM129A0AVI4 362 aa9.48□□□□□ -0.89
SPTLC1P4-201ENST00000435997 LRP5LA4QPB2 252 aa9.48□□□□□ -0.89
SPTLC1P4-201ENST00000435997 RFXANKO14593 260 aa9.48□□□□□ -0.89
SPTLC1P4-201ENST00000435997 LILRA1O75019 489 aa9.48□□□□□ -0.89
SPTLC1P4-201ENST00000435997 SNNO75324 88 aaPredicted RBP9.48□□□□□ -0.89
SPTLC1P4-201ENST00000435997 AHSA1O95433 338 aa9.48□□□□□ -0.89
SPTLC1P4-201ENST00000435997 CBR1P16152 277 aa9.48□□□□□ -0.89
SPTLC1P4-201ENST00000435997 HOXB9P17482 250 aaPredicted RBP9.48□□□□□ -0.89
SPTLC1P4-201ENST00000435997 HNF1AP20823 631 aa9.48□□□□□ -0.89
SPTLC1P4-201ENST00000435997 IL2RGP31785 369 aa9.48□□□□□ -0.89
SPTLC1P4-201ENST00000435997 COPZ1P61923 177 aa9.48□□□□□ -0.89
SPTLC1P4-201ENST00000435997 ROR2Q01974 943 aaKnown RBP9.48□□□□□ -0.89
SPTLC1P4-201ENST00000435997 POU3F1Q03052 451 aaPredicted RBP9.48□□□□□ -0.89
SPTLC1P4-201ENST00000435997 RIN1Q13671 783 aa9.48□□□□□ -0.89
SPTLC1P4-201ENST00000435997 CR1LQ2VPA4 569 aa9.48□□□□□ -0.89
SPTLC1P4-201ENST00000435997 KRT71Q3SY84 523 aa9.48□□□□□ -0.89
SPTLC1P4-201ENST00000435997 GTDC1Q4AE62 458 aa9.48□□□□□ -0.89
SPTLC1P4-201ENST00000435997 PDCD4Q53EL6 469 aaKnown RBP9.48□□□□□ -0.89
SPTLC1P4-201ENST00000435997 MSANTD1Q6ZTZ1 278 aa9.48□□□□□ -0.89
SPTLC1P4-201ENST00000435997 TMEM123Q8N131 208 aa9.48□□□□□ -0.89
SPTLC1P4-201ENST00000435997 CADM2Q8N3J6 435 aa9.48□□□□□ -0.89
SPTLC1P4-201ENST00000435997 NEU4Q8WWR8 484 aaPredicted RBP9.48□□□□□ -0.89
SPTLC1P4-201ENST00000435997 HPS1Q92902 700 aa9.48□□□□□ -0.89
SPTLC1P4-201ENST00000435997 TMEM19Q96HH6 336 aa9.48□□□□□ -0.89
SPTLC1P4-201ENST00000435997 KCNS3Q9BQ31 491 aa9.48□□□□□ -0.89
SPTLC1P4-201ENST00000435997 SPATA9Q9BWV2 254 aa9.48□□□□□ -0.89
SPTLC1P4-201ENST00000435997 RSPO3Q9BXY4 272 aaPredicted RBP9.48□□□□□ -0.89
SPTLC1P4-201ENST00000435997 TPT1P8Q9HAU6 139 aa9.48□□□□□ -0.89
SPTLC1P4-201ENST00000435997 C12orf10Q9HB07 376 aa9.48□□□□□ -0.89
SPTLC1P4-201ENST00000435997 SDR39U1Q9NRG7 319 aaPredicted RBP9.48□□□□□ -0.89
SPTLC1P4-201ENST00000435997 SEC14L4Q9UDX3 406 aa9.48□□□□□ -0.89
SPTLC1P4-201ENST00000435997 IGKV1D-42A0A075B6H8 117 aa9.47□□□□□ -0.89
SPTLC1P4-201ENST00000435997 LOC102725191A0A1B0GVB3 256 aa9.47□□□□□ -0.89
SPTLC1P4-201ENST00000435997 hCG_2039718K7EN88 272 aa9.47□□□□□ -0.89
SPTLC1P4-201ENST00000435997 HDAC3O15379 428 aa9.47□□□□□ -0.89
SPTLC1P4-201ENST00000435997 RGS16O15492 202 aaPredicted RBP9.47□□□□□ -0.89
SPTLC1P4-201ENST00000435997 TRAF3IP2O43734 574 aaPredicted RBP9.47□□□□□ -0.89
SPTLC1P4-201ENST00000435997 KRT33AO76009 404 aa9.47□□□□□ -0.89
SPTLC1P4-201ENST00000435997 TGFAP01135 160 aa9.47□□□□□ -0.89
SPTLC1P4-201ENST00000435997 IL6P05231 212 aa9.47□□□□□ -0.89
SPTLC1P4-201ENST00000435997 C8BP07358 591 aa9.47□□□□□ -0.89
SPTLC1P4-201ENST00000435997 BMP2P12643 396 aa9.47□□□□□ -0.89
SPTLC1P4-201ENST00000435997 IDO1P14902 403 aa9.47□□□□□ -0.89
SPTLC1P4-201ENST00000435997 DAOP14920 347 aa9.47□□□□□ -0.89
SPTLC1P4-201ENST00000435997 EPHA3P29320 983 aa9.47□□□□□ -0.89
SPTLC1P4-201ENST00000435997 DSTNP60981 165 aa9.47□□□□□ -0.89
SPTLC1P4-201ENST00000435997 STX3Q13277 289 aa9.47□□□□□ -0.89
SPTLC1P4-201ENST00000435997 SQLEQ14534 574 aa9.47□□□□□ -0.89
SPTLC1P4-201ENST00000435997 LARS2Q15031 903 aaKnown RBP9.47□□□□□ -0.89
SPTLC1P4-201ENST00000435997 MSMPQ1L6U9 139 aa9.47□□□□□ -0.89
SPTLC1P4-201ENST00000435997 IQCCQ4KMZ1 466 aa9.47□□□□□ -0.89
SPTLC1P4-201ENST00000435997 VHLLQ6RSH7 139 aa9.47□□□□□ -0.89
SPTLC1P4-201ENST00000435997 ZNF627Q7L945 461 aa9.47□□□□□ -0.89
SPTLC1P4-201ENST00000435997 ZNF786Q8N393 782 aa9.47□□□□□ -0.89
SPTLC1P4-201ENST00000435997 ADPRHL1Q8NDY3 354 aa9.47□□□□□ -0.89
SPTLC1P4-201ENST00000435997 ZNF837Q96EG3 531 aaPredicted RBP9.47□□□□□ -0.89
SPTLC1P4-201ENST00000435997 KTI12Q96EK9 354 aaPredicted RBP9.47□□□□□ -0.89
SPTLC1P4-201ENST00000435997 VRK1Q99986 396 aaPredicted RBP9.47□□□□□ -0.89
SPTLC1P4-201ENST00000435997 RAB1BQ9H0U4 201 aa9.47□□□□□ -0.89
SPTLC1P4-201ENST00000435997 WDR55Q9H6Y2 383 aaPredicted RBP9.47□□□□□ -0.89
SPTLC1P4-201ENST00000435997 BCL2L10Q9HD36 194 aa9.47□□□□□ -0.89
SPTLC1P4-201ENST00000435997 THUMPD1Q9NXG2 353 aaKnown RBP9.47□□□□□ -0.89
SPTLC1P4-201ENST00000435997 ZIM2Q9NZV7 527 aa9.47□□□□□ -0.89
SPTLC1P4-201ENST00000435997 A0A0G2JPF8 293 aa9.46□□□□□ -0.9
SPTLC1P4-201ENST00000435997 ZNF99A8MXY4 864 aaPredicted RBP9.46□□□□□ -0.9
SPTLC1P4-201ENST00000435997 HNRNPCL2B2RXH8 293 aa9.46□□□□□ -0.9
SPTLC1P4-201ENST00000435997 HNRNPCL3B7ZW38 293 aa9.46□□□□□ -0.9
SPTLC1P4-201ENST00000435997 HNRNPCL1O60812 293 aaKnown RBP9.46□□□□□ -0.9
SPTLC1P4-201ENST00000435997 HNRNPCL4P0DMR1 293 aa9.46□□□□□ -0.9
SPTLC1P4-201ENST00000435997 NPR2P20594 1047 aa9.46□□□□□ -0.9
SPTLC1P4-201ENST00000435997 HTR2AP28223 471 aa9.46□□□□□ -0.9
SPTLC1P4-201ENST00000435997 THBS4P35443 961 aa9.46□□□□□ -0.9
SPTLC1P4-201ENST00000435997 ARR3P36575 388 aa9.46□□□□□ -0.9
SPTLC1P4-201ENST00000435997 CRATP43155 626 aa9.46□□□□□ -0.9
SPTLC1P4-201ENST00000435997 RPS5P46782 204 aaKnown RBP9.46□□□□□ -0.9
SPTLC1P4-201ENST00000435997 CHN2P52757 468 aa9.46□□□□□ -0.9
SPTLC1P4-201ENST00000435997 CDH15P55291 814 aa9.46□□□□□ -0.9
SPTLC1P4-201ENST00000435997 CLDN17P56750 224 aa9.46□□□□□ -0.9
SPTLC1P4-201ENST00000435997 ARF1P84077 181 aaKnown RBP9.46□□□□□ -0.9
SPTLC1P4-201ENST00000435997 CARTPTQ16568 116 aa9.46□□□□□ -0.9
SPTLC1P4-201ENST00000435997 FAM69AQ5T7M9 428 aa9.46□□□□□ -0.9
SPTLC1P4-201ENST00000435997 MAVSQ7Z434 540 aa9.46□□□□□ -0.9
SPTLC1P4-201ENST00000435997 COMTD1Q86VU5 262 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms