RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 PPIL3Q9H2H8 161 aaKnown RBP10.41□□□□□ -0.74
SCN4A-201ENST00000435607 FGF21Q9NSA1 209 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 GIMAP2Q9UG22 337 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 PIGLQ9Y2B2 252 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 ZNF281Q9Y2X9 895 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 CACNG2Q9Y698 323 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 NCBP2LA6PVI3 153 aaKnown RBP10.41□□□□□ -0.74
SCN4A-201ENST00000435607 SLC16A6O15403 523 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 CYBAP13498 195 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 FABP6P51161 128 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 HMGN3Q15651 99 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 TXNRD3NBQ6F5E7 133 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 CD163Q86VB7 1156 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 FAM185AQ8N0U4 392 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 CD200R1Q8TD46 325 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 SLC25A43Q8WUT9 341 aaPredicted RBP10.41□□□□□ -0.74
SCN4A-201ENST00000435607 HHIPL1Q96JK4 782 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 ERVMER34-1Q9H9K5 563 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 HES4Q9HCC6 221 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 LANCL2Q9NS86 450 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 HSFX1Q9UBD0 423 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 H0YGG7 62 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 HLA-FP30511 346 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 HOXA4Q00056 320 aaPredicted RBP10.41□□□□□ -0.74
SCN4A-201ENST00000435607 B3GNT7Q8NFL0 401 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 L3HYPDHQ96EM0 354 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 APIPQ96GX9 242 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 PEBP4Q96S96 227 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 BCL7BQ9BQE9 202 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 TMEM165Q9HC07 324 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 IL26Q9NPH9 171 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 WRAP73Q9P2S5 460 aaPredicted RBP10.41□□□□□ -0.74
SCN4A-201ENST00000435607 FADS1O60427 444 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 F11P03951 625 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 WDR4P57081 412 aaKnown RBP10.41□□□□□ -0.74
SCN4A-201ENST00000435607 SLC7A9P82251 487 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 MAP4K2Q12851 820 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 MEP1BQ16820 701 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 BTNL3Q6UXE8 466 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 GFRALQ6UXV0 394 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 CAMKMTQ7Z624 323 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 MRPL10Q7Z7H8 261 aaKnown RBP10.41□□□□□ -0.74
SCN4A-201ENST00000435607 SCML4Q8N228 414 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 IFI44Q8TCB0 444 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 MFFQ9GZY8 342 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 LOC285095A0A1B0GVY8 99 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 SGCEO43556 437 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 HLA-AP01891 365 aaKnown RBP10.4□□□□□ -0.74
SCN4A-201ENST00000435607 DTYMKP23919 212 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 LTBQ06643 244 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 VEZF1Q14119 521 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 OR7E24Q6IFN5 339 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 FAM122CQ6P4D5 195 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 PODNL1Q6PEZ8 512 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 MEPCEQ7L2J0 689 aaKnown RBP10.4□□□□□ -0.74
SCN4A-201ENST00000435607 LMNTD1Q8N9Z9 388 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 OR51A2Q8NGJ7 313 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 MRPL38Q96DV4 380 aaKnown RBP10.4□□□□□ -0.74
SCN4A-201ENST00000435607 COQ10AQ96MF6 247 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 NOX3Q9HBY0 568 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 STYXL1Q9Y6J8 313 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 RAB19A4D1S5 217 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 ANKRD61A6NGH8 418 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 C1orf105O95561 183 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 HMGN2P05204 90 aaKnown RBP10.4□□□□□ -0.74
SCN4A-201ENST00000435607 PSMB3P49720 205 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 ZNF91Q05481 1191 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 TPBGQ13641 420 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 OR10J5Q8NHC4 309 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 SMIM3Q9BZL3 60 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 SELENOIQ9C0D9 397 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 SPACA1Q9HBV2 294 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 CPNE5Q9HCH3 593 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 ZNF334Q9HCZ1 680 aaPredicted RBP10.4□□□□□ -0.74
SCN4A-201ENST00000435607 PRDM9Q9NQV7 894 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 TRAV36DV7A0A075B6V5 113 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 PRAMEF25A6NGN4 478 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 WNT7AO00755 349 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 ACP2P11117 423 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 PIN1Q13526 163 aaPredicted RBP10.4□□□□□ -0.74
SCN4A-201ENST00000435607 SELPLGQ14242 412 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 ERV3-1Q14264 604 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 PROX2Q3B8N5 592 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 TSEN54Q7Z6J9 526 aaKnown RBP10.4□□□□□ -0.74
SCN4A-201ENST00000435607 PLPP5Q8NEB5 264 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 AGPAT2O15120 278 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 SNAPINO95295 136 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 SCGB1D1O95968 90 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 HNF1AP20823 631 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 CD27P26842 260 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 FOXC1Q12948 553 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 OR4D1Q15615 310 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 PIP5KL1Q5T9C9 394 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 KDM4DQ6B0I6 523 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 OR5K2Q8NHB8 316 aa10.4□□□□□ -0.74
SCN4A-201ENST00000435607 ZNF436Q9C0F3 470 aaPredicted RBP10.4□□□□□ -0.74
SCN4A-201ENST00000435607 TXNL4BQ9NX01 149 aaKnown RBP10.4□□□□□ -0.74
SCN4A-201ENST00000435607 ZNF346Q9UL40 294 aaKnown RBP10.4□□□□□ -0.74
SCN4A-201ENST00000435607 RP1L1Q8IWN7 2480 aaPredicted RBP10.4□□□□□ -0.74
SCN4A-201ENST00000435607 A0A1B0GX78 115 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms