RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 SNRPD1P62314 119 aaKnown RBP6.87□□□□□ -1.31
CPSF6-202ENST00000435070 PDE7AQ13946 482 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 ASPGQ86U10 573 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 FAM129CQ86XR2 697 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 STOML3Q8TAV4 291 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 TEAD3Q99594 435 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 TBC1D3DA0A087WVF3 549 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 TBC1D3IA0A087WXS9 549 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 TBC1D3EA0A087X179 549 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 TBC1D3KA0A087X1G2 549 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 A0A0B4J2A0 478 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 hCG_1809904A0A1W2PP81 198 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 A0A1W2PR64 198 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 A0A1W2PRV1 198 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 TBC1D3FA6NER0 549 aaPredicted RBP6.87□□□□□ -1.31
CPSF6-202ENST00000435070 COLCA2A8K830 154 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 TBC1D3LB9A6J9 549 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 UGDHO60701 494 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 RPP14O95059 124 aaKnown RBP6.87□□□□□ -1.31
CPSF6-202ENST00000435070 SNRNP70P08621 437 aaKnown RBP6.87□□□□□ -1.31
CPSF6-202ENST00000435070 TBC1D3HP0C7X1 549 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 NDUFB7P17568 137 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 ST3GAL3Q11203 375 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 ZNF792Q3KQV3 632 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 ELFN2Q5R3F8 820 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 TBC1D3GQ6DHY5 549 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 TBC1D3CQ6IPX1 549 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 JMJD6Q6NYC1 403 aaPredicted RBP6.87□□□□□ -1.31
CPSF6-202ENST00000435070 PSRC1Q6PGN9 363 aaPredicted RBP6.87□□□□□ -1.31
CPSF6-202ENST00000435070 ZNF620Q6ZNG0 422 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 MISPQ8IVT2 679 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 TBC1D3Q8IZP1 549 aaPredicted RBP6.87□□□□□ -1.31
CPSF6-202ENST00000435070 ZNF565Q8N9K5 539 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 SNX33Q8WV41 574 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 OR5P2Q8WZ92 322 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 PIGQQ9BRB3 760 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 LAT2Q9GZY6 243 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 SHPKQ9UHJ6 478 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 CPED1A4D0V7 1026 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 TEAD1P28347 426 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 HOXC12P31275 282 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 PNLIPRP1P54315 467 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 TAS2R20P59543 309 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 CCINQ13939 588 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 CRMP1Q14194 572 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 Q6ZVL8 140 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 ARMC10Q8N2F6 343 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 POC1BQ8TC44 478 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 ARL11Q969Q4 196 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 SDHAF3Q9NRP4 125 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 DCAF16Q9NXF7 216 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 EPHA6Q9UF33 1036 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 CBY1Q9Y3M2 126 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 EEF1E1-BLOC1S5C9J1V9 151 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 EIF4E2O60573 245 aaKnown RBP6.87□□□□□ -1.31
CPSF6-202ENST00000435070 GAAP10253 952 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 ABOP16442 354 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 IGFALSP35858 605 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 ATP1B3P54709 279 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 F2RL1P55085 397 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 ECH1Q13011 328 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 AGERQ15109 404 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 MRM1Q6IN84 353 aaKnown RBP6.87□□□□□ -1.31
CPSF6-202ENST00000435070 SLC36A1Q7Z2H8 476 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 OR4E2Q8NGC2 313 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 TCTEX1D2Q8WW35 142 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 UQCC1Q9NVA1 299 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 ZNF780BQ9Y6R6 833 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 PLXND1Q9Y4D7 1925 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 TRBV23OR9-2A0A075B6M9 112 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 CD2P06729 351 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 SPARCP09486 303 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 SBK2P0C263 348 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 RNF212Q495C1 297 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 SCGB2B2Q4G0G5 96 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 PXKQ7Z7A4 578 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 TMEM200AQ86VY9 491 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 AMER3Q8N944 861 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 CASTOR1Q8WTX7 329 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 TRPV4Q9HBA0 871 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 SIRT3Q9NTG7 399 aaPredicted RBP6.87□□□□□ -1.31
CPSF6-202ENST00000435070 PADI3Q9ULW8 664 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 CCDC163A0A0D9SF12 145 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 RHPN2P1A8MT19 583 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 M0R036 132 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 ACOT7O00154 380 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 C1GALT1C1LP0DN25 315 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 NPPBP16860 134 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 GPR143P51810 404 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 ZNF85Q03923 595 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 SCGB2A2Q13296 93 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.86□□□□□ -1.31
CPSF6-202ENST00000435070 FOXRED2Q8IWF2 684 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 LINC00471Q8N535 108 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 OR10H5Q8NGA6 315 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 AKR7LQ8NHP1 331 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 RGP1Q92546 391 aaPredicted RBP6.86□□□□□ -1.31
CPSF6-202ENST00000435070 MACROD1Q9BQ69 325 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 PRO1933Q9H354 126 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 KCNK15Q9H427 330 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms