RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 SHOXO15266 292 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 ERCC1P07992 297 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-207ENST00000429896 S1PR1P21453 382 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 ACP1P24666 158 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 SLC18B1Q6NT16 456 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 RNF165Q6ZSG1 346 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 AAED1Q7RTV5 226 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 SYT14Q8NB59 555 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 OR51L1Q8NGJ5 315 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 M1APQ8TC57 530 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 RNF6Q9Y252 685 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 ISPDA4D126 451 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 FCGR2AP12318 317 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 CELP19835 753 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 FXYD4P59646 89 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 ACOT12Q8WYK0 555 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 CALHM2Q9HA72 323 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 EXTL2Q9UBQ6 330 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 CDH10Q9Y6N8 788 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 PATJQ8NI35 1801 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 COL4A6Q14031 1691 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 A8MVM7 634 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 PRKNO60260 465 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-207ENST00000429896 ID4P47928 161 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 C22orf42Q6IC83 251 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 KLBQ86Z14 1044 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 J3KTA2 159 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 SNAP29O95721 258 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 IFNGR1P15260 489 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 SOX3P41225 446 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 CLDN17P56750 224 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 C9orf135Q5VTT2 229 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 AADACL4Q5VUY2 407 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 SLC6A19Q695T7 634 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 PLBD1Q6P4A8 553 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 OR4D6Q8NGJ1 314 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 ELP5Q8TE02 316 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 ZNF501Q96CX3 271 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-207ENST00000429896 NGBQ9NPG2 151 aa11.86□□□□□ -0.51
PTCH1-207ENST00000429896 RAB4BP61018 213 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 APOFQ13790 326 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 DHRS4L2Q6PKH6 230 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 AMER3Q8N944 861 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 EXD3Q8N9H8 876 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 GOT1L1Q8NHS2 421 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-207ENST00000429896 MUCL1Q96DR8 90 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 SAT2Q96F10 170 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-207ENST00000429896 FAM173AQ9BQD7 235 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 TUBA1CQ9BQE3 449 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 USP22Q9UPT9 525 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 MN1Q10571 1320 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-207ENST00000429896 EEF1E1-BLOC1S5C9J1V9 151 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 CD3GP09693 182 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 CEACAM1P13688 526 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 TMEM11P17152 192 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 MVKQ03426 396 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 ACER2Q5QJU3 275 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 MFSD8Q8NHS3 518 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 WDR54Q9H977 334 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 HAO2Q9NYQ3 351 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 TMEM184BQ9Y519 407 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-207ENST00000429896 A0A1B0GVC2 190 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 IQCF1Q8N6M8 205 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 CNOT9Q92600 299 aaKnown RBP11.85□□□□□ -0.51
PTCH1-207ENST00000429896 ISOC1Q96CN7 298 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 MEIS3P1A6NDR6 274 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 THBS1P07996 1170 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 LIPCP11150 499 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 ELAVL4P26378 380 aaKnown RBP11.85□□□□□ -0.51
PTCH1-207ENST00000429896 FAM205BPQ63HN1 556 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 ADGRG5Q8IZF4 528 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 LRR1Q96L50 414 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 ULBP2Q9BZM5 246 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 ZNF225Q9UK10 706 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 RIDAP52758 137 aaKnown RBP11.85□□□□□ -0.51
PTCH1-207ENST00000429896 TMEM69Q5SWH9 247 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 NIPAL3Q6P499 406 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 DLEU7Q6UYE1 221 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 CAMKMTQ7Z624 323 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 ZNF584Q8IVC4 421 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 NEDD4LQ96PU5 975 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 PAPOLGQ9BWT3 736 aaKnown RBP11.85□□□□□ -0.51
PTCH1-207ENST00000429896 DNTTIP1Q9H147 329 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 RLIMQ9NVW2 624 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 GON4LQ3T8J9 2241 aa11.85□□□□□ -0.51
PTCH1-207ENST00000429896 TEX51A0A1B0GUA7 166 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 TBX19O60806 448 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 MYF6P23409 242 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 GPR139Q6DWJ6 353 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 PGM2L1Q6PCE3 622 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 ARRB2P32121 409 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 PRTGQ2VWP7 1150 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 PLPP5Q8NEB5 264 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 SECISBP2Q96T21 854 aaKnown RBP11.84□□□□□ -0.51
PTCH1-207ENST00000429896 ADAM18Q9Y3Q7 739 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 A0A087WZY1 265 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 GPR171O14626 319 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 PIGAP37287 484 aa11.84□□□□□ -0.51
PTCH1-207ENST00000429896 RBMXP38159 391 aaKnown RBP11.84□□□□□ -0.51
PTCH1-207ENST00000429896 MAMSTRQ6ZN01 415 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms