RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 ZNF546Q86UE3 836 aa12.65□□□□□ -0.38
SGMS1-203ENST00000429490 INO80EQ8NBZ0 244 aaPredicted RBP12.65□□□□□ -0.38
SGMS1-203ENST00000429490 SMIM19Q96E16 107 aa12.65□□□□□ -0.38
SGMS1-203ENST00000429490 CPNE2Q96FN4 548 aaPredicted RBP12.65□□□□□ -0.38
SGMS1-203ENST00000429490 LINC00615Q96LM1 132 aaPredicted RBP12.65□□□□□ -0.38
SGMS1-203ENST00000429490 SERINC2Q96SA4 455 aa12.65□□□□□ -0.38
SGMS1-203ENST00000429490 ZFYVE21Q9BQ24 234 aa12.65□□□□□ -0.38
SGMS1-203ENST00000429490 NLRC5Q86WI3 1866 aa12.65□□□□□ -0.38
SGMS1-203ENST00000429490 A0A1W2PPV9 198 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 OTOL1A6NHN0 477 aaPredicted RBP12.64□□□□□ -0.39
SGMS1-203ENST00000429490 H7C2Y5 167 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 CCSO14618 274 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 GPR75O95800 540 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 ZGLP1P0C6A0 271 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 POU3F2P20265 443 aaPredicted RBP12.64□□□□□ -0.39
SGMS1-203ENST00000429490 HTR2AP28223 471 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 MAT1AQ00266 395 aaKnown RBP12.64□□□□□ -0.39
SGMS1-203ENST00000429490 CAMK2DQ13557 499 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 WDR88Q6ZMY6 472 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 GRAMD2AQ8IUY3 354 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 RNF113BQ8IZP6 322 aaKnown RBP12.64□□□□□ -0.39
SGMS1-203ENST00000429490 OR6V1Q8N148 313 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 MFSD9Q8NBP5 474 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 SMIM4Q8WVI0 70 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 LINC00052Q96N35 136 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 C7orf50Q9BRJ6 194 aaKnown RBP12.64□□□□□ -0.39
SGMS1-203ENST00000429490 FKRPQ9H9S5 495 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 PTTG3PQ9NZH4 202 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 CDC14CA4D256 554 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 IFITM5A6NNB3 132 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 PLPP2O43688 288 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 HOXB2P14652 356 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 CXCR1P25024 350 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 GUCA2AQ02747 115 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 RUNX3Q13761 415 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 GRM7Q14831 915 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 CDNFQ49AH0 187 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 ALG10Q5BKT4 473 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 RNLSQ5VYX0 342 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 ADAMTSL4Q6UY14 1074 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 CCDC107Q8WV48 283 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 MMABQ96EY8 250 aaPredicted RBP12.64□□□□□ -0.39
SGMS1-203ENST00000429490 CXorf58Q96LI9 332 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 ADGRL4Q9HBW9 690 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 ZFP64Q9NPA5 681 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 UPB1Q9UBR1 384 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 ERVK-19Q9WJR5 959 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 EXOGQ9Y2C4 368 aaKnown RBP12.64□□□□□ -0.39
SGMS1-203ENST00000429490 IGKV1-8A0A0C4DH67 115 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 RAB3DO95716 219 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 IGHA1P01876 353 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 TFPIP10646 304 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 AKR1C4P17516 323 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 MMP15P51511 669 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 GPR143P51810 404 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 CD200R1LQ6Q8B3 271 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 BPHLQ86WA6 291 aaPredicted RBP12.64□□□□□ -0.39
SGMS1-203ENST00000429490 FAM181AQ8N9Y4 354 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 PLPP7Q8NBV4 271 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 OR1F2PQ96R84 312 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 DAPP1Q9UN19 280 aa12.64□□□□□ -0.39
SGMS1-203ENST00000429490 MEIKINA0A087WXM9 373 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 PYCARD-AS1I3L0S3 204 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 MAOBP27338 520 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 ZNF85Q03923 595 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 KCTD20Q7Z5Y7 419 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 ZAR1Q86SH2 424 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 LSMEM1Q8N8F7 131 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 HSD17B8Q92506 261 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 C5orf34Q96MH7 638 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 PITHD1Q9GZP4 211 aaPredicted RBP12.63□□□□□ -0.39
SGMS1-203ENST00000429490 ACTR10Q9NZ32 417 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 PLCL2Q9UPR0 1127 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 SCDO00767 359 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 M6PRP20645 277 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 CDONQ4KMG0 1287 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 SLC25A30Q5SVS4 291 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 OR7E24Q6IFN5 339 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 ULK3Q6PHR2 472 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 LILRA6Q6PI73 481 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 TSSK4Q6SA08 328 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 GLB1L2Q8IW92 636 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 ZNF248Q8NDW4 579 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 OR10K1Q8NGX5 313 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 THAP6Q8TBB0 222 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 PTDSS2Q9BVG9 487 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 IFT46Q9NQC8 304 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 ASF1BQ9NVP2 202 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 ELF5Q9UKW6 265 aaPredicted RBP12.63□□□□□ -0.39
SGMS1-203ENST00000429490 POMT2Q9UKY4 750 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 RABL2BQ9UNT1 228 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 GABARAPH6UMI1 98 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 TOR1AO14656 332 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 SDC3O75056 442 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 MPC2O95563 127 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 RLN2P04090 185 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 EMDP50402 254 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 SEC61A1P61619 476 aaKnown RBP12.63□□□□□ -0.39
SGMS1-203ENST00000429490 DUSP8Q13202 625 aa12.63□□□□□ -0.39
SGMS1-203ENST00000429490 ARHGAP11BQ3KRB8 267 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms