RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 PRAMEF7Q5VXH5 474 aa14.78□□□□□ -0.04
C9orf3-206ENST00000428313 LIPNQ5VXI9 398 aa14.78□□□□□ -0.04
C9orf3-206ENST00000428313 RPL22L1Q6P5R6 122 aaKnown RBP14.78□□□□□ -0.04
C9orf3-206ENST00000428313 LRRTM1Q86UE6 522 aa14.78□□□□□ -0.04
C9orf3-206ENST00000428313 C1QL4Q86Z23 238 aa14.78□□□□□ -0.04
C9orf3-206ENST00000428313 OR52L1Q8NGH7 329 aa14.78□□□□□ -0.04
C9orf3-206ENST00000428313 LYSMD1Q96S90 227 aa14.78□□□□□ -0.04
C9orf3-206ENST00000428313 LAT2Q9GZY6 243 aa14.78□□□□□ -0.04
C9orf3-206ENST00000428313 POFUT1Q9H488 388 aa14.78□□□□□ -0.04
C9orf3-206ENST00000428313 CWH43Q9H720 699 aa14.78□□□□□ -0.04
C9orf3-206ENST00000428313 MEPEQ9NQ76 525 aaPredicted RBP14.78□□□□□ -0.04
C9orf3-206ENST00000428313 TIMM10BQ9Y5J6 103 aa14.78□□□□□ -0.04
C9orf3-206ENST00000428313 CASP8AP2Q9UKL3 1982 aa14.78□□□□□ -0.04
C9orf3-206ENST00000428313 METTL21EPA6NDL7 271 aa14.78□□□□□ -0.04
C9orf3-206ENST00000428313 BHLHE40O14503 412 aa14.78□□□□□ -0.04
C9orf3-206ENST00000428313 NPC1O15118 1278 aa14.78□□□□□ -0.04
C9orf3-206ENST00000428313 SOCS5O75159 536 aa14.78□□□□□ -0.04
C9orf3-206ENST00000428313 NTN1O95631 604 aa14.78□□□□□ -0.04
C9orf3-206ENST00000428313 PPP1R3DO95685 299 aa14.78□□□□□ -0.04
C9orf3-206ENST00000428313 CD14P08571 375 aa14.78□□□□□ -0.04
C9orf3-206ENST00000428313 MRPL3P09001 348 aaKnown RBP14.78□□□□□ -0.04
C9orf3-206ENST00000428313 ZGLP1P0C6A0 271 aa14.78□□□□□ -0.04
C9orf3-206ENST00000428313 RBM34P42696 430 aaKnown RBP14.78□□□□□ -0.04
C9orf3-206ENST00000428313 POU3F4P49335 361 aa14.78□□□□□ -0.04
C9orf3-206ENST00000428313 BAP18Q8IXM2 172 aa14.78□□□□□ -0.04
C9orf3-206ENST00000428313 SAT2Q96F10 170 aaPredicted RBP14.78□□□□□ -0.04
C9orf3-206ENST00000428313 ADAM19Q9H013 955 aa14.78□□□□□ -0.04
C9orf3-206ENST00000428313 PRDM13Q9H4Q3 707 aa14.78□□□□□ -0.04
C9orf3-206ENST00000428313 SUV39H2Q9H5I1 410 aa14.78□□□□□ -0.04
C9orf3-206ENST00000428313 NOX4Q9NPH5 578 aa14.78□□□□□ -0.04
C9orf3-206ENST00000428313 TRPC4Q9UBN4 977 aa14.78□□□□□ -0.04
C9orf3-206ENST00000428313 SLC13A4Q9UKG4 626 aa14.78□□□□□ -0.04
C9orf3-206ENST00000428313 ATXN7L1Q9ULK2 861 aaPredicted RBP14.78□□□□□ -0.04
C9orf3-206ENST00000428313 TMEM72A0PK05 275 aa14.77□□□□□ -0.04
C9orf3-206ENST00000428313 FAM86C2PA6NEL3 165 aa14.77□□□□□ -0.04
C9orf3-206ENST00000428313 RNASEK-C17orf49H0YIS7 233 aa14.77□□□□□ -0.04
C9orf3-206ENST00000428313 SLC16A8O95907 504 aa14.77□□□□□ -0.04
C9orf3-206ENST00000428313 HOXB5P09067 269 aa14.77□□□□□ -0.04
C9orf3-206ENST00000428313 FAM157CP0CG43 387 aa14.77□□□□□ -0.04
C9orf3-206ENST00000428313 HLA-GP17693 338 aa14.77□□□□□ -0.04
C9orf3-206ENST00000428313 HOXA5P20719 270 aa14.77□□□□□ -0.04
C9orf3-206ENST00000428313 SLC2A5P22732 501 aa14.77□□□□□ -0.04
C9orf3-206ENST00000428313 SGSHP51688 502 aa14.77□□□□□ -0.04
C9orf3-206ENST00000428313 RGS8P57771 180 aaPredicted RBP14.77□□□□□ -0.04
C9orf3-206ENST00000428313 CD81P60033 236 aa14.77□□□□□ -0.04
C9orf3-206ENST00000428313 ACTA2P62736 377 aa14.77□□□□□ -0.04
C9orf3-206ENST00000428313 RPS15P62841 145 aaKnown RBP14.77□□□□□ -0.04
C9orf3-206ENST00000428313 ACTG2P63267 376 aa14.77□□□□□ -0.04
C9orf3-206ENST00000428313 SIRPAP78324 504 aa14.77□□□□□ -0.04
C9orf3-206ENST00000428313 SSBP1Q04837 148 aaKnown RBP14.77□□□□□ -0.04
C9orf3-206ENST00000428313 CXorf40AQ8TE69 158 aa14.77□□□□□ -0.04
C9orf3-206ENST00000428313 ZNF764Q96H86 408 aaPredicted RBP14.77□□□□□ -0.04
C9orf3-206ENST00000428313 MEGF10Q96KG7 1140 aa14.77□□□□□ -0.04
C9orf3-206ENST00000428313 RHOVQ96L33 236 aa14.77□□□□□ -0.04
C9orf3-206ENST00000428313 OR52D1Q9H346 318 aa14.77□□□□□ -0.04
C9orf3-206ENST00000428313 CHMP1AQ9HD42 196 aaPredicted RBP14.77□□□□□ -0.04
C9orf3-206ENST00000428313 CMC2Q9NRP2 79 aa14.77□□□□□ -0.04
C9orf3-206ENST00000428313 POT1Q9NUX5 634 aa14.77□□□□□ -0.04
C9orf3-206ENST00000428313 FAM96BQ9Y3D0 163 aa14.77□□□□□ -0.04
C9orf3-206ENST00000428313 DYRK1BQ9Y463 629 aa14.77□□□□□ -0.04
C9orf3-206ENST00000428313 PLXND1Q9Y4D7 1925 aa14.77□□□□□ -0.04
C9orf3-206ENST00000428313 XRCC3O43542 346 aa14.77□□□□□ -0.05
C9orf3-206ENST00000428313 IGSF6O95976 241 aa14.77□□□□□ -0.05
C9orf3-206ENST00000428313 CD5P06127 495 aa14.77□□□□□ -0.05
C9orf3-206ENST00000428313 HIST1H1BP16401 226 aaKnown RBP14.77□□□□□ -0.05
C9orf3-206ENST00000428313 ACKR3P25106 362 aa14.77□□□□□ -0.05
C9orf3-206ENST00000428313 MAGEB1P43366 347 aa14.77□□□□□ -0.05
C9orf3-206ENST00000428313 NUBP1P53384 320 aa14.77□□□□□ -0.05
C9orf3-206ENST00000428313 AIMP2Q13155 320 aaKnown RBP14.77□□□□□ -0.05
C9orf3-206ENST00000428313 MLC1Q15049 377 aa14.77□□□□□ -0.05
C9orf3-206ENST00000428313 ANKRD39Q53RE8 183 aa14.77□□□□□ -0.05
C9orf3-206ENST00000428313 PPP1R1CQ8WVI7 109 aa14.77□□□□□ -0.05
C9orf3-206ENST00000428313 PELI1Q96FA3 418 aa14.77□□□□□ -0.05
C9orf3-206ENST00000428313 CPNE2Q96FN4 548 aaPredicted RBP14.77□□□□□ -0.05
C9orf3-206ENST00000428313 RSRP1Q9BUV0 290 aa14.77□□□□□ -0.05
C9orf3-206ENST00000428313 RIOK2Q9BVS4 552 aaKnown RBP14.77□□□□□ -0.05
C9orf3-206ENST00000428313 GDE1Q9NZC3 331 aa14.77□□□□□ -0.05
C9orf3-206ENST00000428313 LPAR3Q9UBY5 353 aa14.77□□□□□ -0.05
C9orf3-206ENST00000428313 CACFD1Q9UGQ2 172 aa14.77□□□□□ -0.05
C9orf3-206ENST00000428313 KPTNQ9Y664 436 aa14.77□□□□□ -0.05
C9orf3-206ENST00000428313 UNC119BA6NIH7 251 aa14.76□□□□□ -0.05
C9orf3-206ENST00000428313 PIN1P1O15428 100 aa14.76□□□□□ -0.05
C9orf3-206ENST00000428313 PAPLNO95428 1278 aa14.76□□□□□ -0.05
C9orf3-206ENST00000428313 NDUFS1P28331 727 aa14.76□□□□□ -0.05
C9orf3-206ENST00000428313 MAPK8P45983 427 aa14.76□□□□□ -0.05
C9orf3-206ENST00000428313 SCAND1P57086 179 aa14.76□□□□□ -0.05
C9orf3-206ENST00000428313 ERV3-1Q14264 604 aa14.76□□□□□ -0.05
C9orf3-206ENST00000428313 ALG11Q2TAA5 492 aa14.76□□□□□ -0.05
C9orf3-206ENST00000428313 UNQ6126/PRO20091Q6UXV3 157 aa14.76□□□□□ -0.05
C9orf3-206ENST00000428313 LRRTM4Q86VH4 590 aa14.76□□□□□ -0.05
C9orf3-206ENST00000428313 NUDT13Q86X67 352 aa14.76□□□□□ -0.05
C9orf3-206ENST00000428313 MYLIPQ8WY64 445 aa14.76□□□□□ -0.05
C9orf3-206ENST00000428313 ZCCHC2Q9C0B9 1178 aaKnown RBP14.76□□□□□ -0.05
C9orf3-206ENST00000428313 CHST5Q9GZS9 411 aa14.76□□□□□ -0.05
C9orf3-206ENST00000428313 AHSPQ9NZD4 102 aa14.76□□□□□ -0.05
C9orf3-206ENST00000428313 POMT1Q9Y6A1 747 aa14.76□□□□□ -0.05
C9orf3-206ENST00000428313 TEX13DA0A0J9YY54 714 aaPredicted RBP14.76□□□□□ -0.05
C9orf3-206ENST00000428313 A6NLC8 198 aa14.76□□□□□ -0.05
C9orf3-206ENST00000428313 CDC42EP2O14613 210 aa14.76□□□□□ -0.05
C9orf3-206ENST00000428313 BCAT2O15382 392 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms