RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 PCSK6P29122 969 aa16.1■□□□□ 0.17
PSPC1-202ENST00000427943 GRPRP30550 384 aa16.1■□□□□ 0.17
PSPC1-202ENST00000427943 PRPS1P60891 318 aa16.1■□□□□ 0.17
PSPC1-202ENST00000427943 IL1RL1Q01638 556 aa16.1■□□□□ 0.17
PSPC1-202ENST00000427943 DMTNQ08495 405 aa16.1■□□□□ 0.17
PSPC1-202ENST00000427943 NFYCQ13952 458 aa16.1■□□□□ 0.17
PSPC1-202ENST00000427943 FAM69AQ5T7M9 428 aa16.1■□□□□ 0.17
PSPC1-202ENST00000427943 AGAP6Q5VW22 663 aa16.1■□□□□ 0.17
PSPC1-202ENST00000427943 SMYD1Q8NB12 490 aa16.1■□□□□ 0.17
PSPC1-202ENST00000427943 OR1K1Q8NGR3 316 aa16.1■□□□□ 0.17
PSPC1-202ENST00000427943 ZNF417Q8TAU3 575 aa16.1■□□□□ 0.17
PSPC1-202ENST00000427943 DNAJA4Q8WW22 397 aaPredicted RBP16.1■□□□□ 0.17
PSPC1-202ENST00000427943 HS6ST2Q96MM7 605 aa16.1■□□□□ 0.17
PSPC1-202ENST00000427943 ANKRD27Q96NW4 1050 aa16.1■□□□□ 0.17
PSPC1-202ENST00000427943 ZNF587Q96SQ5 575 aaPredicted RBP16.1■□□□□ 0.17
PSPC1-202ENST00000427943 CGREF1Q99674 301 aa16.1■□□□□ 0.17
PSPC1-202ENST00000427943 DHRS9Q9BPW9 319 aa16.1■□□□□ 0.17
PSPC1-202ENST00000427943 KLHL14Q9P2G3 628 aa16.1■□□□□ 0.17
PSPC1-202ENST00000427943 B3GAT1Q9P2W7 334 aa16.1■□□□□ 0.17
PSPC1-202ENST00000427943 B3GALT5Q9Y2C3 310 aa16.1■□□□□ 0.17
PSPC1-202ENST00000427943 ATP6V1G2-DDX39BF2Z307 99 aa16.09■□□□□ 0.17
PSPC1-202ENST00000427943 M0R3H8 397 aa16.09■□□□□ 0.17
PSPC1-202ENST00000427943 AIM2O14862 343 aa16.09■□□□□ 0.17
PSPC1-202ENST00000427943 TPST2O60704 377 aa16.09■□□□□ 0.17
PSPC1-202ENST00000427943 SERPINB7O75635 380 aa16.09■□□□□ 0.17
PSPC1-202ENST00000427943 MFN2O95140 757 aa16.09■□□□□ 0.17
PSPC1-202ENST00000427943 WNT11O96014 354 aa16.09■□□□□ 0.17
PSPC1-202ENST00000427943 ZNF43P17038 809 aa16.09■□□□□ 0.17
PSPC1-202ENST00000427943 TTKP33981 857 aa16.09■□□□□ 0.17
PSPC1-202ENST00000427943 FABP6P51161 128 aa16.09■□□□□ 0.17
PSPC1-202ENST00000427943 OR1Q1Q15612 314 aa16.09■□□□□ 0.17
PSPC1-202ENST00000427943 ETFDHQ16134 617 aa16.09■□□□□ 0.17
PSPC1-202ENST00000427943 TBRG1Q3YBR2 411 aa16.09■□□□□ 0.17
PSPC1-202ENST00000427943 C11orf71Q6IPW1 123 aa16.09■□□□□ 0.17
PSPC1-202ENST00000427943 ULK3Q6PHR2 472 aa16.09■□□□□ 0.17
PSPC1-202ENST00000427943 C5orf46Q6UWT4 87 aa16.09■□□□□ 0.17
PSPC1-202ENST00000427943 DEPDC4Q8N2C3 294 aa16.09■□□□□ 0.17
PSPC1-202ENST00000427943 DPP10Q8N608 796 aa16.09■□□□□ 0.17
PSPC1-202ENST00000427943 C11orf65Q8NCR3 313 aa16.09■□□□□ 0.17
PSPC1-202ENST00000427943 HTRA1Q92743 480 aa16.09■□□□□ 0.17
PSPC1-202ENST00000427943 SLC47A1Q96FL8 570 aa16.09■□□□□ 0.17
PSPC1-202ENST00000427943 CACNG6Q9BXT2 260 aa16.09■□□□□ 0.17
PSPC1-202ENST00000427943 SELENONQ9NZV5 590 aa16.09■□□□□ 0.17
PSPC1-202ENST00000427943 ARFGEF3Q5TH69 2177 aa16.09■□□□□ 0.17
PSPC1-202ENST00000427943 ALPK2Q86TB3 2170 aa16.09■□□□□ 0.17
PSPC1-202ENST00000427943 TRAV36DV7A0A075B6V5 113 aa16.08■□□□□ 0.16
PSPC1-202ENST00000427943 A0A0B4J2E0 115 aa16.08■□□□□ 0.16
PSPC1-202ENST00000427943 A0A1B0GX12 115 aa16.08■□□□□ 0.16
PSPC1-202ENST00000427943 OR2T1O43869 369 aa16.08■□□□□ 0.16
PSPC1-202ENST00000427943 FZD7O75084 574 aa16.08■□□□□ 0.16
PSPC1-202ENST00000427943 PCBP3P57721 371 aaKnown RBP16.08■□□□□ 0.16
PSPC1-202ENST00000427943 TUBA1BP68363 451 aa16.08■□□□□ 0.16
PSPC1-202ENST00000427943 TUBA4AP68366 448 aa16.08■□□□□ 0.16
PSPC1-202ENST00000427943 ROR2Q01974 943 aaKnown RBP16.08■□□□□ 0.16
PSPC1-202ENST00000427943 SF3A3Q12874 501 aaKnown RBP eCLIP16.08■□□□□ 0.16
PSPC1-202ENST00000427943 C1DQ13901 141 aaKnown RBP16.08■□□□□ 0.16
PSPC1-202ENST00000427943 FAM91A1Q658Y4 838 aa16.08■□□□□ 0.16
PSPC1-202ENST00000427943 TUBA1AQ71U36 451 aa16.08■□□□□ 0.16
PSPC1-202ENST00000427943 RANBP3LQ86VV4 465 aaPredicted RBP16.08■□□□□ 0.16
PSPC1-202ENST00000427943 FBXL14Q8N1E6 418 aa16.08■□□□□ 0.16
PSPC1-202ENST00000427943 MUC15Q8N387 334 aa16.08■□□□□ 0.16
PSPC1-202ENST00000427943 BHLHE22Q8NFJ8 381 aaPredicted RBP16.08■□□□□ 0.16
PSPC1-202ENST00000427943 OXGR1Q96P68 337 aa16.08■□□□□ 0.16
PSPC1-202ENST00000427943 TMEM120AQ9BXJ8 343 aa16.08■□□□□ 0.16
PSPC1-202ENST00000427943 GRIP2Q9C0E4 1043 aa16.08■□□□□ 0.16
PSPC1-202ENST00000427943 TMEM27Q9HBJ8 222 aa16.08■□□□□ 0.16
PSPC1-202ENST00000427943 CBLN4Q9NTU7 201 aa16.08■□□□□ 0.16
PSPC1-202ENST00000427943 MOKQ9UQ07 419 aa16.08■□□□□ 0.16
PSPC1-202ENST00000427943 RCE1Q9Y256 329 aa16.08■□□□□ 0.16
PSPC1-202ENST00000427943 A0A087WUJ7 227 aa16.07■□□□□ 0.16
PSPC1-202ENST00000427943 A0A096LPE4 126 aa16.07■□□□□ 0.16
PSPC1-202ENST00000427943 A0A1W2PPZ6 126 aa16.07■□□□□ 0.16
PSPC1-202ENST00000427943 OR6C65A6NJZ3 312 aa16.07■□□□□ 0.16
PSPC1-202ENST00000427943 INAFM1C9JVW0 142 aa16.07■□□□□ 0.16
PSPC1-202ENST00000427943 SSX4O60224 188 aa16.07■□□□□ 0.16
PSPC1-202ENST00000427943 CDH12P55289 794 aa16.07■□□□□ 0.16
PSPC1-202ENST00000427943 RBBP4Q09028 425 aa16.07■□□□□ 0.16
PSPC1-202ENST00000427943 HMBOX1Q6NT76 420 aa16.07■□□□□ 0.16
PSPC1-202ENST00000427943 GPR32P1Q8NGA4 272 aa16.07■□□□□ 0.16
PSPC1-202ENST00000427943 SIKE1Q9BRV8 207 aa16.07■□□□□ 0.16
PSPC1-202ENST00000427943 LINC00470Q9BZP3 86 aa16.07■□□□□ 0.16
PSPC1-202ENST00000427943 NELFAQ9H3P2 528 aa16.07■□□□□ 0.16
PSPC1-202ENST00000427943 FKRPQ9H9S5 495 aa16.07■□□□□ 0.16
PSPC1-202ENST00000427943 HIVEP2P31629 2446 aa16.07■□□□□ 0.16
PSPC1-202ENST00000427943 IGHV1-18A0A0C4DH31 117 aa16.06■□□□□ 0.16
PSPC1-202ENST00000427943 LRRN3E7EW58 273 aa16.06■□□□□ 0.16
PSPC1-202ENST00000427943 M0QX08 132 aa16.06■□□□□ 0.16
PSPC1-202ENST00000427943 TRAF3IP2O43734 574 aaPredicted RBP16.06■□□□□ 0.16
PSPC1-202ENST00000427943 SLC43A1O75387 559 aa16.06■□□□□ 0.16
PSPC1-202ENST00000427943 ZNF432O94892 652 aa16.06■□□□□ 0.16
PSPC1-202ENST00000427943 BGLAPP02818 100 aa16.06■□□□□ 0.16
PSPC1-202ENST00000427943 NQO1P15559 274 aaKnown RBP16.06■□□□□ 0.16
PSPC1-202ENST00000427943 UBE2NP61088 152 aaKnown RBP16.06■□□□□ 0.16
PSPC1-202ENST00000427943 KRTAP1-1Q07627 177 aa16.06■□□□□ 0.16
PSPC1-202ENST00000427943 NPTX1Q15818 432 aa16.06■□□□□ 0.16
PSPC1-202ENST00000427943 NRF1Q16656 503 aa16.06■□□□□ 0.16
PSPC1-202ENST00000427943 DUSP7Q16829 419 aa16.06■□□□□ 0.16
PSPC1-202ENST00000427943 H1FNTQ75WM6 255 aaPredicted RBP16.06■□□□□ 0.16
PSPC1-202ENST00000427943 VANGL1Q8TAA9 524 aaPredicted RBP16.06■□□□□ 0.16
PSPC1-202ENST00000427943 TSPEARQ8WU66 669 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms