RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 HIF3AQ9Y2N7 669 aa13.77□□□□□ -0.21
COL11A1-204ENST00000427239 SHANK1Q9Y566 2161 aa13.77□□□□□ -0.21
COL11A1-204ENST00000427239 E9PLN8 166 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 MS4A18H0YCH9 400 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 RCBTB2O95199 551 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 ADORA3P0DMS8 318 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 TIMP3P35625 211 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 P2RY4P51582 365 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 TRIP10Q15642 601 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 MS4A18Q3C1V0 323 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 RTL6Q6ICC9 239 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 OR2A2Q6IF42 318 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 RPL13AP3Q6NVV1 102 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 RPTNQ6XPR3 784 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 ZBTB49Q6ZSB9 765 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 P4HA3Q7Z4N8 544 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 PXKQ7Z7A4 578 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 MEX3DQ86XN8 651 aaKnown RBP13.76□□□□□ -0.21
COL11A1-204ENST00000427239 OXGR1Q96P68 337 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 NIPSNAP1Q9BPW8 284 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 VKORC1Q9BQB6 163 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 NDEL1Q9GZM8 345 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 RNF122Q9H9V4 155 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 KLHL9Q9P2J3 617 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 NKX1-2Q9UD57 310 aaPredicted RBP13.76□□□□□ -0.21
COL11A1-204ENST00000427239 TINAGQ9UJW2 476 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 OSGIN2Q9Y236 505 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 FAM215AQ9Y5M1 114 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 POLEQ07864 2286 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 MPDZO75970 2070 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 IGHV3-15A0A0B4J1V0 119 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 MBD3L4A6NDZ8 208 aaPredicted RBP13.76□□□□□ -0.21
COL11A1-204ENST00000427239 MBD3L3A6NE82 208 aaPredicted RBP13.76□□□□□ -0.21
COL11A1-204ENST00000427239 MBD3L5A6NJ08 208 aaPredicted RBP13.76□□□□□ -0.21
COL11A1-204ENST00000427239 PDLIM1O00151 329 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 CASQ2O14958 399 aaPredicted RBP13.76□□□□□ -0.21
COL11A1-204ENST00000427239 AQP8O94778 261 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 ATP6V1G2O95670 118 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 TGM6O95932 706 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 AHCYP23526 432 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 UQCRC1P31930 480 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 CA7P43166 264 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 DAPP51397 102 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 RASGEF1BQ0VAM2 473 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 FHL1Q13642 323 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 SLC17A1Q14916 467 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 SNCBQ16143 134 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 IGFBP7Q16270 282 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 KDM4DQ6B0I6 523 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 SMARCD3Q6STE5 483 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 RASSF6Q6ZTQ3 369 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 MCEMP1Q8IX19 187 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 OR13C2Q8NGS9 318 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 MBD3L2Q8NHZ7 208 aaPredicted RBP13.76□□□□□ -0.21
COL11A1-204ENST00000427239 TTYH2Q9BSA4 534 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 C8orf4Q9NR00 106 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 IL20Q9NYY1 176 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 SEC14L4Q9UDX3 406 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 NOX1Q9Y5S8 564 aa13.76□□□□□ -0.21
COL11A1-204ENST00000427239 ZGRF1Q86YA3 2104 aa13.75□□□□□ -0.21
COL11A1-204ENST00000427239 TRAV27A0A087WT01 109 aa13.75□□□□□ -0.21
COL11A1-204ENST00000427239 TRGV8A0A0C4DH27 118 aa13.75□□□□□ -0.21
COL11A1-204ENST00000427239 A0A1W2PNV4 684 aa13.75□□□□□ -0.21
COL11A1-204ENST00000427239 ZNF814B7Z6K7 855 aa13.75□□□□□ -0.21
COL11A1-204ENST00000427239 GPR171O14626 319 aa13.75□□□□□ -0.21
COL11A1-204ENST00000427239 RNF13O43567 381 aa13.75□□□□□ -0.21
COL11A1-204ENST00000427239 ZNF43P17038 809 aa13.75□□□□□ -0.21
COL11A1-204ENST00000427239 ALDH3A2P51648 485 aa13.75□□□□□ -0.21
COL11A1-204ENST00000427239 SLC16A1P53985 500 aa13.75□□□□□ -0.21
COL11A1-204ENST00000427239 PPP2R2BQ00005 443 aa13.75□□□□□ -0.21
COL11A1-204ENST00000427239 MRPL49Q13405 166 aaKnown RBP13.75□□□□□ -0.21
COL11A1-204ENST00000427239 POU4F3Q15319 338 aa13.75□□□□□ -0.21
COL11A1-204ENST00000427239 ABLIM2Q6H8Q1 611 aa13.75□□□□□ -0.21
COL11A1-204ENST00000427239 TMEM211Q6ICI0 200 aa13.75□□□□□ -0.21
COL11A1-204ENST00000427239 GPAT4Q86UL3 456 aa13.75□□□□□ -0.21
COL11A1-204ENST00000427239 EPHX4Q8IUS5 362 aa13.75□□□□□ -0.21
COL11A1-204ENST00000427239 CBR4Q8N4T8 237 aa13.75□□□□□ -0.21
COL11A1-204ENST00000427239 CLDN22Q8N7P3 220 aa13.75□□□□□ -0.21
COL11A1-204ENST00000427239 ZFP3Q96NJ6 502 aa13.75□□□□□ -0.21
COL11A1-204ENST00000427239 SMURF2Q9HAU4 748 aa13.75□□□□□ -0.21
COL11A1-204ENST00000427239 PAPOLBQ9NRJ5 636 aaKnown RBP13.75□□□□□ -0.21
COL11A1-204ENST00000427239 ENOPH1Q9UHY7 261 aa13.75□□□□□ -0.21
COL11A1-204ENST00000427239 POFUT2Q9Y2G5 429 aa13.75□□□□□ -0.21
COL11A1-204ENST00000427239 NBASA2RRP1 2371 aa13.75□□□□□ -0.21
COL11A1-204ENST00000427239 IGKV3D-15A0A087WSY6 115 aa13.74□□□□□ -0.21
COL11A1-204ENST00000427239 ZNF716A6NP11 495 aa13.74□□□□□ -0.21
COL11A1-204ENST00000427239 NDUFB2O95178 105 aa13.74□□□□□ -0.21
COL11A1-204ENST00000427239 PLGP00747 810 aaPredicted RBP13.74□□□□□ -0.21
COL11A1-204ENST00000427239 IL2RAP01589 272 aa13.74□□□□□ -0.21
COL11A1-204ENST00000427239 ALPLP05186 524 aa13.74□□□□□ -0.21
COL11A1-204ENST00000427239 YES1P07947 543 aa13.74□□□□□ -0.21
COL11A1-204ENST00000427239 AQP2P41181 271 aa13.74□□□□□ -0.21
COL11A1-204ENST00000427239 RPL18Q07020 188 aaKnown RBP13.74□□□□□ -0.21
COL11A1-204ENST00000427239 DAG1Q14118 895 aa13.74□□□□□ -0.21
COL11A1-204ENST00000427239 EIF2S3LQ2VIR3 472 aaKnown RBP13.74□□□□□ -0.21
COL11A1-204ENST00000427239 RFX4Q33E94 735 aa13.74□□□□□ -0.21
COL11A1-204ENST00000427239 ALG10Q5BKT4 473 aa13.74□□□□□ -0.21
COL11A1-204ENST00000427239 KLHL17Q6TDP4 642 aa13.74□□□□□ -0.21
COL11A1-204ENST00000427239 C3P1Q6ZMU1 363 aa13.74□□□□□ -0.21
COL11A1-204ENST00000427239 PARP8Q8N3A8 854 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms