RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 FAM69BQ5VUD6 431 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 DGAT2L7PQ6IED9 249 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 H3F3CQ6NXT2 135 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 CCDC121Q6ZUS5 278 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 CCDC80Q76M96 950 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 C6orf120Q7Z4R8 191 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 SLC44A2Q8IWA5 706 aaPredicted RBP4.92□□□□□ -1.62
C9orf3-205ENST00000427193 DEFB107AQ8IZN7 70 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 CLEC4FQ8N1N0 589 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 ZNF321PQ8N8H1 164 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 SCAIQ8N9R8 606 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 MORN4Q8NDC4 146 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 CHDHQ8NE62 594 aaPredicted RBP4.92□□□□□ -1.62
C9orf3-205ENST00000427193 OR11G2Q8NGC1 345 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 CDC26Q8NHZ8 85 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 APOBEC4Q8WW27 367 aaKnown RBP4.92□□□□□ -1.62
C9orf3-205ENST00000427193 PSMF1Q92530 271 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 RIT1Q92963 219 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 MR1Q95460 341 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 ADIPOR1Q96A54 375 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 PPWD1Q96BP3 646 aaKnown RBP4.92□□□□□ -1.62
C9orf3-205ENST00000427193 RBM18Q96H35 190 aaKnown RBP4.92□□□□□ -1.62
C9orf3-205ENST00000427193 MS4A4EQ96PG1 132 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 BBS4Q96RK4 519 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 CDRT15Q96T59 188 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 LHPPQ9H008 270 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 ANKRA2Q9H9E1 313 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 BCL2L10Q9HD36 194 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 A4GALTQ9NPC4 353 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 GID8Q9NWU2 228 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 IRAK4Q9NWZ3 460 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 NDUFAF4Q9P032 175 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 C3orf18Q9UK00 162 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 RCE1Q9Y256 329 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 FARSAQ9Y285 508 aaKnown RBP4.92□□□□□ -1.62
C9orf3-205ENST00000427193 AP3M1Q9Y2T2 418 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.92□□□□□ -1.62
C9orf3-205ENST00000427193 NUP210LQ5VU65 1888 aa4.92□□□□□ -1.62
C9orf3-205ENST00000427193 SAA2-SAA4A0A096LPE2 208 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 RNF103-CHMP3A0A140T963 221 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 TTC36A6NLP5 189 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 OR6C76A6NM76 312 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 C17orf105B2RV13 164 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 C9J4A7 227 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 K7EM74 188 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 GYG2O15488 501 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 PRKNO60260 465 aaPredicted RBP4.91□□□□□ -1.62
C9orf3-205ENST00000427193 ZNF354AO60765 605 aaPredicted RBP4.91□□□□□ -1.62
C9orf3-205ENST00000427193 NME6O75414 186 aaPredicted RBP4.91□□□□□ -1.62
C9orf3-205ENST00000427193 BCAS2O75934 225 aaPredicted RBP4.91□□□□□ -1.62
C9orf3-205ENST00000427193 ACTL6BO94805 426 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 SORBS2O94875 1100 aaKnown RBP4.91□□□□□ -1.62
C9orf3-205ENST00000427193 NADKO95544 446 aaPredicted RBP4.91□□□□□ -1.62
C9orf3-205ENST00000427193 CPSF4O95639 269 aaKnown RBP4.91□□□□□ -1.62
C9orf3-205ENST00000427193 IGHEP01854 428 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 ACP2P11117 423 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 TCN2P20062 427 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 GNALP38405 381 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 PPICP45877 212 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 GPR12P47775 334 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 OR4D2P58180 307 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 MTPNP58546 118 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 SLC26A5P58743 744 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 AP2B1P63010 937 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 LIPEQ05469 1076 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 RBBP4Q09028 425 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 STX4Q12846 297 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 HSPB3Q12988 150 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 CHAF1BQ13112 559 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 MYBPHQ13203 477 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 ART3Q13508 389 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 EBPQ15125 230 aaKnown RBP4.91□□□□□ -1.62
C9orf3-205ENST00000427193 DUSP5Q16690 384 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 MMEL1Q495T6 779 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 SFT2D3Q587I9 215 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 SAMD4BQ5PRF9 694 aaKnown RBP4.91□□□□□ -1.62
C9orf3-205ENST00000427193 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.91□□□□□ -1.62
C9orf3-205ENST00000427193 PRAMEF8Q5VWM4 474 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 MLIPQ5VWP3 458 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 PRAMEF7Q5VXH5 474 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 TYW3Q6IPR3 259 aaKnown RBP4.91□□□□□ -1.62
C9orf3-205ENST00000427193 LCN8Q6JVE9 175 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 CDC73Q6P1J9 531 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 TMEM107Q6UX40 140 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 NPSR1Q6W5P4 371 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 ZNF621Q6ZSS3 439 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 CPEB2Q7Z5Q1 589 aaKnown RBP4.91□□□□□ -1.62
C9orf3-205ENST00000427193 RNF130Q86XS8 419 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 HPS6Q86YV9 775 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 C9orf40Q8IXQ3 194 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 FBXW8Q8N3Y1 598 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 KIF2BQ8N4N8 673 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 TRIML2Q8N7C3 387 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 B3GNT7Q8NFL0 401 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 OR4A15Q8NGL6 344 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 OR10A6Q8NH74 314 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 NUBPLQ8TB37 319 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 SLC38A5Q8WUX1 472 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 DAZLQ92904 295 aaKnown RBP4.91□□□□□ -1.62
C9orf3-205ENST00000427193 ASB9Q96DX5 294 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms