RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 SEPHS2Q99611 448 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 PRRG4Q9BZD6 226 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 UCK2Q9BZX2 261 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 MMADHCQ9H3L0 296 aaPredicted RBP6.6□□□□□ -1.35
LINC01049-201ENST00000426840 IL1RAPQ9NPH3 570 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 MEPEQ9NQ76 525 aaPredicted RBP6.6□□□□□ -1.35
LINC01049-201ENST00000426840 COQ3Q9NZJ6 369 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 SELENONQ9NZV5 590 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 RHCGQ9UBD6 479 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 ZNF629Q9UEG4 869 aaPredicted RBP6.6□□□□□ -1.35
LINC01049-201ENST00000426840 MCTS1Q9ULC4 181 aaKnown RBP6.6□□□□□ -1.35
LINC01049-201ENST00000426840 CLEC4AQ9UMR7 237 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 V9GYQ6 96 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 SPTBN1Q01082 2364 aaKnown RBP6.6□□□□□ -1.35
LINC01049-201ENST00000426840 ALPK2Q86TB3 2170 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 MYO18BQ8IUG5 2567 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 USP9XQ93008 2570 aaPredicted RBP6.59□□□□□ -1.35
LINC01049-201ENST00000426840 A0A087WUU8 490 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 A0A1W2PNV4 684 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 TCRBV3S1A0A5B6 114 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 AQP12BA6NM10 295 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 ZNF716A6NP11 495 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 LRRN3E7EW58 273 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 MS4A18H0YCH9 400 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 hCG_2039718K7EN88 272 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 EIF1BO60739 113 aaKnown RBP6.59□□□□□ -1.35
LINC01049-201ENST00000426840 SS18L1O75177 396 aaPredicted RBP6.59□□□□□ -1.35
LINC01049-201ENST00000426840 AKR7A3O95154 331 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 AHSA1O95433 338 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 CLDN14O95500 239 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 CGAP01215 116 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 MT-ND1P03886 318 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 GPIP06744 558 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 FCGR2AP12318 317 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 PTNP21246 168 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 CBLP22681 906 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 RBM34P42696 430 aaKnown RBP6.59□□□□□ -1.35
LINC01049-201ENST00000426840 HMGA2P52926 109 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 UGT2B15P54855 530 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 FOXD4Q12950 439 aaPredicted RBP6.59□□□□□ -1.35
LINC01049-201ENST00000426840 SLC17A1Q14916 467 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 TRAM2Q15035 370 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 PDK3Q15120 406 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 RNPS1Q15287 305 aaKnown RBP6.59□□□□□ -1.35
LINC01049-201ENST00000426840 MS4A18Q3C1V0 323 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 OTUD3Q5T2D3 398 aaPredicted RBP6.59□□□□□ -1.35
LINC01049-201ENST00000426840 FAM69AQ5T7M9 428 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 EEF1A1P5Q5VTE0 462 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 ABLIM2Q6H8Q1 611 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 VWA1Q6PCB0 445 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 TBPL2Q6SJ96 375 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 PAQR6Q6TCH4 344 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 FAM214BQ7L5A3 538 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 NUFIP2Q7Z417 695 aaKnown RBP6.59□□□□□ -1.35
LINC01049-201ENST00000426840 ZDHHC21Q8IVQ6 265 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 AQP12AQ8IXF9 295 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 ADGRG5Q8IZF4 528 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 OFCC1Q8IZS5 231 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 RELL2Q8NC24 303 aaPredicted RBP6.59□□□□□ -1.35
LINC01049-201ENST00000426840 ABHD3Q8WU67 409 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 TMEM255BQ8WV15 326 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 TMEM239Q8WW34 195 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 POP5Q969H6 163 aaKnown RBP6.59□□□□□ -1.35
LINC01049-201ENST00000426840 MCUR1Q96AQ8 359 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 SLC25A36Q96CQ1 311 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 STARD4Q96DR4 205 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 GMPPAQ96IJ6 420 aaPredicted RBP6.59□□□□□ -1.35
LINC01049-201ENST00000426840 MOGAT1Q96PD6 335 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 PSD2Q9BQI7 771 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 NAA11Q9BSU3 229 aaPredicted RBP6.59□□□□□ -1.35
LINC01049-201ENST00000426840 FUZQ9BT04 418 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 FNDC11Q9BVV2 318 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 TAPBPLQ9BX59 468 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 SLC19A3Q9BZV2 496 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 WNT10AQ9GZT5 417 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 ANKRD19PQ9H560 264 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 MAGIXQ9H6Y5 334 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 NMNAT1Q9HAN9 279 aaPredicted RBP6.59□□□□□ -1.35
LINC01049-201ENST00000426840 BCO1Q9HAY6 547 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 GP6Q9HCN6 339 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 PLSCR4Q9NRQ2 329 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 GLRX2Q9NS18 164 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 JKAMPQ9P055 326 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 SEC14L4Q9UDX3 406 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 FAM32AQ9Y421 112 aaKnown RBP6.59□□□□□ -1.35
LINC01049-201ENST00000426840 FREM1Q5H8C1 2179 aa6.59□□□□□ -1.35
LINC01049-201ENST00000426840 UBR5O95071 2799 aaPredicted RBP6.58□□□□□ -1.36
LINC01049-201ENST00000426840 IGKV3D-15A0A087WSY6 115 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 LOC102725191A0A1B0GVB3 256 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 A0A1W2PRQ8 180 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 AQP7P3A6NL99 342 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 ZNF724A8MTY0 619 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 CLDN1O95832 211 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 CH25HO95992 272 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 IGF2P01344 180 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 PF4P02776 101 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 FABP3P05413 133 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 H1F0P07305 194 aaKnown RBP6.58□□□□□ -1.36
LINC01049-201ENST00000426840 YES1P07947 543 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 UMPSP11172 480 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms