RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 CSF3P09919 207 aa8.73□□□□□ -1.01
GACAT3-201ENST00000426539 CECR9P0C854 216 aa8.73□□□□□ -1.01
GACAT3-201ENST00000426539 HNRNPCL4P0DMR1 293 aa8.73□□□□□ -1.01
GACAT3-201ENST00000426539 PNMTP11086 282 aa8.73□□□□□ -1.01
GACAT3-201ENST00000426539 IGFBP5P24593 272 aa8.73□□□□□ -1.01
GACAT3-201ENST00000426539 SERPINF1P36955 418 aa8.73□□□□□ -1.01
GACAT3-201ENST00000426539 NR4A2P43354 598 aa8.73□□□□□ -1.01
GACAT3-201ENST00000426539 COPZ1P61923 177 aa8.73□□□□□ -1.01
GACAT3-201ENST00000426539 NAAAQ02083 359 aa8.73□□□□□ -1.01
GACAT3-201ENST00000426539 HGFACQ04756 655 aa8.73□□□□□ -1.01
GACAT3-201ENST00000426539 RGNQ15493 299 aa8.73□□□□□ -1.01
GACAT3-201ENST00000426539 ADIPOQQ15848 244 aa8.73□□□□□ -1.01
GACAT3-201ENST00000426539 PRAMEF8Q5VWM4 474 aa8.73□□□□□ -1.01
GACAT3-201ENST00000426539 PRAMEF7Q5VXH5 474 aa8.73□□□□□ -1.01
GACAT3-201ENST00000426539 NXNQ6DKJ4 435 aa8.73□□□□□ -1.01
GACAT3-201ENST00000426539 ANKRD16Q6P6B7 361 aa8.73□□□□□ -1.01
GACAT3-201ENST00000426539 KLHL24Q6TFL4 600 aa8.73□□□□□ -1.01
GACAT3-201ENST00000426539 ABHD12BQ7Z5M8 362 aaPredicted RBP8.73□□□□□ -1.01
GACAT3-201ENST00000426539 C10orf111Q8N326 155 aa8.73□□□□□ -1.01
GACAT3-201ENST00000426539 ANKS4BQ8N8V4 417 aa8.73□□□□□ -1.01
GACAT3-201ENST00000426539 MFSD8Q8NHS3 518 aa8.73□□□□□ -1.01
GACAT3-201ENST00000426539 MAGEE2Q8TD90 523 aaPredicted RBP8.73□□□□□ -1.01
GACAT3-201ENST00000426539 STK35Q8TDR2 534 aa8.73□□□□□ -1.01
GACAT3-201ENST00000426539 GTF2H4Q92759 462 aa8.73□□□□□ -1.01
GACAT3-201ENST00000426539 MAL2Q969L2 176 aa8.73□□□□□ -1.01
GACAT3-201ENST00000426539 ZNF837Q96EG3 531 aaPredicted RBP8.73□□□□□ -1.01
GACAT3-201ENST00000426539 KTI12Q96EK9 354 aaPredicted RBP8.73□□□□□ -1.01
GACAT3-201ENST00000426539 FOXN4Q96NZ1 517 aa8.73□□□□□ -1.01
GACAT3-201ENST00000426539 KATNB1Q9BVA0 655 aa8.73□□□□□ -1.01
GACAT3-201ENST00000426539 LINC00470Q9BZP3 86 aa8.73□□□□□ -1.01
GACAT3-201ENST00000426539 PAIP1Q9H074 479 aaKnown RBP8.73□□□□□ -1.01
GACAT3-201ENST00000426539 BCL2L10Q9HD36 194 aa8.73□□□□□ -1.01
GACAT3-201ENST00000426539 CA10Q9NS85 328 aa8.73□□□□□ -1.01
GACAT3-201ENST00000426539 RASD1Q9Y272 281 aa8.73□□□□□ -1.01
GACAT3-201ENST00000426539 PCDHB14Q9Y5E9 798 aa8.73□□□□□ -1.01
GACAT3-201ENST00000426539 STAB1Q9NY15 2570 aa8.73□□□□□ -1.01
GACAT3-201ENST00000426539 IGKV1D-42A0A075B6H8 117 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 A0A096LPI6 279 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 IGHV4-61A0A0C4DH41 118 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 SLCO1B7G3V0H7 640 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 LMX1BO60663 402 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 KRT33AO76009 404 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 AHSA1O95433 338 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 ANP32DO95626 131 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 AVPP01185 164 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 IGFBP1P08833 259 aaPredicted RBP8.72□□□□□ -1.01
GACAT3-201ENST00000426539 BMP2P12643 396 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 BMP4P12644 408 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 NCF2P19878 526 aaPredicted RBP8.72□□□□□ -1.01
GACAT3-201ENST00000426539 HTR2AP28223 471 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 RPS5P46782 204 aaKnown RBP8.72□□□□□ -1.01
GACAT3-201ENST00000426539 PDLIM4P50479 330 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 POLR2JP52435 117 aaKnown RBP8.72□□□□□ -1.01
GACAT3-201ENST00000426539 CLDN17P56750 224 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 SRSF2Q01130 221 aaKnown RBP8.72□□□□□ -1.01
GACAT3-201ENST00000426539 ROR2Q01974 943 aaKnown RBP8.72□□□□□ -1.01
GACAT3-201ENST00000426539 GGTLC2Q14390 218 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 LARS2Q15031 903 aaKnown RBP8.72□□□□□ -1.01
GACAT3-201ENST00000426539 EFNB3Q15768 340 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 ZSWIM7Q19AV6 140 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 KRTAP24-1Q3LI83 254 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 C3orf36Q3SXR2 165 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 ZNF311Q5JNZ3 666 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 ATG16L1Q676U5 607 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 SLC2A7Q6PXP3 512 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 C6orf89Q6UWU4 347 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 MSANTD1Q6ZTZ1 278 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 MSRB3Q8IXL7 192 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 TMEM158Q8WZ71 300 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 SLC25A36Q96CQ1 311 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 MSI2Q96DH6 328 aaKnown RBP8.72□□□□□ -1.01
GACAT3-201ENST00000426539 ITCHQ96J02 903 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 SOX7Q9BT81 388 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 BEX2Q9BXY8 128 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 PLK3Q9H4B4 646 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 RMND5AQ9H871 391 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 A4GALTQ9NPC4 353 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 SLC25A37Q9NYZ2 338 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 ZNF232Q9UNY5 417 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 IFT52Q9Y366 437 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 ARFGEF3Q5TH69 2177 aa8.72□□□□□ -1.01
GACAT3-201ENST00000426539 YLPM1P49750 1951 aaKnown RBP8.72□□□□□ -1.01
GACAT3-201ENST00000426539 OR6C65A6NJZ3 312 aa8.71□□□□□ -1.02
GACAT3-201ENST00000426539 B9A039 149 aa8.71□□□□□ -1.02
GACAT3-201ENST00000426539 RPL36A-HNRNPH2H7BZ11 118 aa8.71□□□□□ -1.02
GACAT3-201ENST00000426539 NDUFS8O00217 210 aa8.71□□□□□ -1.02
GACAT3-201ENST00000426539 CLIC1O00299 241 aa8.71□□□□□ -1.02
GACAT3-201ENST00000426539 UBDO15205 165 aa8.71□□□□□ -1.02
GACAT3-201ENST00000426539 PDE5AO76074 875 aa8.71□□□□□ -1.02
GACAT3-201ENST00000426539 IGKV3-15P01624 115 aa8.71□□□□□ -1.02
GACAT3-201ENST00000426539 CRYAAP02489 173 aa8.71□□□□□ -1.02
GACAT3-201ENST00000426539 OR4A8P0C604 315 aa8.71□□□□□ -1.02
GACAT3-201ENST00000426539 GZMKP49863 264 aa8.71□□□□□ -1.02
GACAT3-201ENST00000426539 SLC18A1P54219 525 aa8.71□□□□□ -1.02
GACAT3-201ENST00000426539 UBE2NP61088 152 aaKnown RBP8.71□□□□□ -1.02
GACAT3-201ENST00000426539 SNRPD2P62316 118 aaKnown RBP8.71□□□□□ -1.02
GACAT3-201ENST00000426539 ARF1P84077 181 aaKnown RBP8.71□□□□□ -1.02
GACAT3-201ENST00000426539 PHYHD1Q5SRE7 291 aa8.71□□□□□ -1.02
GACAT3-201ENST00000426539 C6orf10Q5SRN2 563 aa8.71□□□□□ -1.02
GACAT3-201ENST00000426539 VHLLQ6RSH7 139 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms