RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 CD8BP10966 210 aa21.74■■□□□ 1.07
VEGFA-209ENST00000425836 IFI30P13284 250 aa21.74■■□□□ 1.07
VEGFA-209ENST00000425836 PRKCDQ05655 676 aa21.74■■□□□ 1.07
VEGFA-209ENST00000425836 PMS2P3Q13401 168 aa21.74■■□□□ 1.07
VEGFA-209ENST00000425836 MS4A18Q3C1V0 323 aa21.74■■□□□ 1.07
VEGFA-209ENST00000425836 GALNT5Q7Z7M9 940 aa21.74■■□□□ 1.07
VEGFA-209ENST00000425836 LUZP2Q86TE4 346 aa21.74■■□□□ 1.07
VEGFA-209ENST00000425836 B3GAT1Q9P2W7 334 aa21.74■■□□□ 1.07
VEGFA-209ENST00000425836 KLF2Q9Y5W3 355 aaPredicted RBP21.74■■□□□ 1.07
VEGFA-209ENST00000425836 MED12LQ86YW9 2145 aa21.74■■□□□ 1.07
VEGFA-209ENST00000425836 DOPEY1Q5JWR5 2465 aa21.74■■□□□ 1.07
VEGFA-209ENST00000425836 HTR3EA5X5Y0 456 aa21.74■■□□□ 1.07
VEGFA-209ENST00000425836 A8MXE2 369 aa21.74■■□□□ 1.07
VEGFA-209ENST00000425836 PLPP3O14495 311 aa21.74■■□□□ 1.07
VEGFA-209ENST00000425836 MSTNO14793 375 aa21.74■■□□□ 1.07
VEGFA-209ENST00000425836 CIB2O75838 187 aa21.74■■□□□ 1.07
VEGFA-209ENST00000425836 NQO1P15559 274 aaKnown RBP21.74■■□□□ 1.07
VEGFA-209ENST00000425836 FUT1P19526 365 aa21.74■■□□□ 1.07
VEGFA-209ENST00000425836 NTF4P34130 210 aa21.74■■□□□ 1.07
VEGFA-209ENST00000425836 ASCL1P50553 236 aa21.74■■□□□ 1.07
VEGFA-209ENST00000425836 POU4F3Q15319 338 aa21.74■■□□□ 1.07
VEGFA-209ENST00000425836 SEC23BQ15437 767 aa21.74■■□□□ 1.07
VEGFA-209ENST00000425836 ZIC4Q8N9L1 334 aa21.74■■□□□ 1.07
VEGFA-209ENST00000425836 ZNF610Q8N9Z0 462 aa21.74■■□□□ 1.07
VEGFA-209ENST00000425836 LIPHQ8WWY8 451 aa21.74■■□□□ 1.07
VEGFA-209ENST00000425836 BPIFA2Q96DR5 249 aa21.74■■□□□ 1.07
VEGFA-209ENST00000425836 OXGR1Q96P68 337 aa21.74■■□□□ 1.07
VEGFA-209ENST00000425836 LOC102725191A0A1B0GVB3 256 aa21.73■■□□□ 1.07
VEGFA-209ENST00000425836 HPRP00739 348 aa21.73■■□□□ 1.07
VEGFA-209ENST00000425836 HOXB6P17509 224 aaKnown RBP21.73■■□□□ 1.07
VEGFA-209ENST00000425836 MAKP20794 623 aa21.73■■□□□ 1.07
VEGFA-209ENST00000425836 CCNIQ14094 377 aa21.73■■□□□ 1.07
VEGFA-209ENST00000425836 FBXL19-AS1Q494R0 122 aa21.73■■□□□ 1.07
VEGFA-209ENST00000425836 RRM2BQ7LG56 351 aa21.73■■□□□ 1.07
VEGFA-209ENST00000425836 MEX3DQ86XN8 651 aaKnown RBP21.73■■□□□ 1.07
VEGFA-209ENST00000425836 EPHX4Q8IUS5 362 aa21.73■■□□□ 1.07
VEGFA-209ENST00000425836 SLCO4A1Q96BD0 722 aa21.73■■□□□ 1.07
VEGFA-209ENST00000425836 CCM2LQ9NUG4 571 aaPredicted RBP21.73■■□□□ 1.07
VEGFA-209ENST00000425836 NOSIPQ9Y314 301 aaKnown RBP21.73■■□□□ 1.07
VEGFA-209ENST00000425836 SH3PXD2BA1X283 911 aa21.72■■□□□ 1.07
VEGFA-209ENST00000425836 KRT36O76013 467 aa21.72■■□□□ 1.07
VEGFA-209ENST00000425836 HIST1H2ABP04908 130 aa21.72■■□□□ 1.07
VEGFA-209ENST00000425836 LIMS1P48059 325 aa21.72■■□□□ 1.07
VEGFA-209ENST00000425836 HMGA2P52926 109 aa21.72■■□□□ 1.07
VEGFA-209ENST00000425836 ZNF474Q6S9Z5 364 aaPredicted RBP21.72■■□□□ 1.07
VEGFA-209ENST00000425836 CREB3L2Q70SY1 520 aa21.72■■□□□ 1.07
VEGFA-209ENST00000425836 HIST3H2AQ7L7L0 130 aa21.72■■□□□ 1.07
VEGFA-209ENST00000425836 PAPD5Q8NDF8 572 aaKnown RBP21.72■■□□□ 1.07
VEGFA-209ENST00000425836 OR4K5Q8NGD3 323 aa21.72■■□□□ 1.07
VEGFA-209ENST00000425836 HIST1H2ACQ93077 130 aa21.72■■□□□ 1.07
VEGFA-209ENST00000425836 RSRC1Q96IZ7 334 aaKnown RBP21.72■■□□□ 1.07
VEGFA-209ENST00000425836 ZNF385AQ96PM9 386 aaKnown RBP21.72■■□□□ 1.07
VEGFA-209ENST00000425836 ALPK1Q96QP1 1244 aa21.72■■□□□ 1.07
VEGFA-209ENST00000425836 TAS2R5Q9NYW4 299 aa21.72■■□□□ 1.07
VEGFA-209ENST00000425836 EDNRAP25101 427 aa21.71■■□□□ 1.07
VEGFA-209ENST00000425836 PUDPQ08623 228 aa21.71■■□□□ 1.07
VEGFA-209ENST00000425836 OR2T5Q6IEZ7 315 aa21.71■■□□□ 1.07
VEGFA-209ENST00000425836 TFAP2EQ6VUC0 442 aa21.71■■□□□ 1.07
VEGFA-209ENST00000425836 OR2T29Q8NH02 315 aa21.71■■□□□ 1.07
VEGFA-209ENST00000425836 LYVE1Q9Y5Y7 322 aa21.71■■□□□ 1.07
VEGFA-209ENST00000425836 LRRK2Q5S007 2527 aa21.71■■□□□ 1.07
VEGFA-209ENST00000425836 PRSS44E7EML9 344 aa21.7■■□□□ 1.06
VEGFA-209ENST00000425836 C19orf84I3L1E1 186 aa21.7■■□□□ 1.06
VEGFA-209ENST00000425836 TNFRSF11BO00300 401 aa21.7■■□□□ 1.06
VEGFA-209ENST00000425836 FKBP6O75344 327 aa21.7■■□□□ 1.06
VEGFA-209ENST00000425836 ADORA3P0DMS8 318 aa21.7■■□□□ 1.06
VEGFA-209ENST00000425836 HLA-DOBP13765 273 aa21.7■■□□□ 1.06
VEGFA-209ENST00000425836 ZNF43P17038 809 aa21.7■■□□□ 1.06
VEGFA-209ENST00000425836 GRNP28799 593 aaKnown RBP21.7■■□□□ 1.06
VEGFA-209ENST00000425836 OR3A2P47893 321 aa21.7■■□□□ 1.06
VEGFA-209ENST00000425836 IL1RL1Q01638 556 aa21.7■■□□□ 1.06
VEGFA-209ENST00000425836 EXOC3L2Q2M3D2 409 aa21.7■■□□□ 1.06
VEGFA-209ENST00000425836 ZC3HAV1Q7Z2W4 902 aaKnown RBP21.7■■□□□ 1.06
VEGFA-209ENST00000425836 CDK20Q8IZL9 346 aa21.7■■□□□ 1.06
VEGFA-209ENST00000425836 OR4C15Q8NGM1 316 aa21.7■■□□□ 1.06
VEGFA-209ENST00000425836 TMEM45BQ96B21 275 aa21.7■■□□□ 1.06
VEGFA-209ENST00000425836 RBM24Q9BX46 236 aaKnown RBP21.7■■□□□ 1.06
VEGFA-209ENST00000425836 FANCFQ9NPI8 374 aa21.7■■□□□ 1.06
VEGFA-209ENST00000425836 NPDC1Q9NQX5 325 aaPredicted RBP21.7■■□□□ 1.06
VEGFA-209ENST00000425836 VNN3Q9NY84 501 aa21.7■■□□□ 1.06
VEGFA-209ENST00000425836 MRPL33O75394 65 aaKnown RBP21.7■■□□□ 1.06
VEGFA-209ENST00000425836 OR6A2O95222 327 aa21.7■■□□□ 1.06
VEGFA-209ENST00000425836 AHCYP23526 432 aa21.7■■□□□ 1.06
VEGFA-209ENST00000425836 OMPP47874 163 aa21.7■■□□□ 1.06
VEGFA-209ENST00000425836 ZP4Q12836 540 aa21.7■■□□□ 1.06
VEGFA-209ENST00000425836 C1DQ13901 141 aaKnown RBP21.7■■□□□ 1.06
VEGFA-209ENST00000425836 ZSCAN26Q16670 478 aa21.7■■□□□ 1.06
VEGFA-209ENST00000425836 NHLRC1Q6VVB1 395 aa21.7■■□□□ 1.06
VEGFA-209ENST00000425836 TMPRSS11FQ6ZWK6 438 aa21.7■■□□□ 1.06
VEGFA-209ENST00000425836 NANOGNBQ7Z5D8 188 aa21.7■■□□□ 1.06
VEGFA-209ENST00000425836 RNASE6Q93091 150 aaKnown RBP21.7■■□□□ 1.06
VEGFA-209ENST00000425836 TMCC3Q9ULS5 477 aa21.7■■□□□ 1.06
VEGFA-209ENST00000425836 MPDZO75970 2070 aa21.69■■□□□ 1.06
VEGFA-209ENST00000425836 COL12A1Q99715 3063 aa21.69■■□□□ 1.06
VEGFA-209ENST00000425836 EFCAB9A8MZ26 197 aa21.69■■□□□ 1.06
VEGFA-209ENST00000425836 BLOC1S5-TXNDC5H3BN57 136 aa21.69■■□□□ 1.06
VEGFA-209ENST00000425836 CST1P01037 141 aa21.69■■□□□ 1.06
VEGFA-209ENST00000425836 TSPAN19P0C672 248 aa21.69■■□□□ 1.06
VEGFA-209ENST00000425836 GPR4P46093 362 aa21.69■■□□□ 1.06
VEGFA-209ENST00000425836 PXKQ7Z7A4 578 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms