RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 SSX1Q16384 188 aa13.72□□□□□ -0.21
ACTB-204ENST00000425660 DCAF10Q5QP82 559 aa13.72□□□□□ -0.21
ACTB-204ENST00000425660 B3GNTL1Q67FW5 361 aaPredicted RBP13.72□□□□□ -0.21
ACTB-204ENST00000425660 GPR139Q6DWJ6 353 aa13.72□□□□□ -0.21
ACTB-204ENST00000425660 GALNT15Q8N3T1 639 aa13.72□□□□□ -0.21
ACTB-204ENST00000425660 SCAIQ8N9R8 606 aa13.72□□□□□ -0.21
ACTB-204ENST00000425660 OR4K17Q8NGC6 315 aa13.72□□□□□ -0.21
ACTB-204ENST00000425660 ZBTB8AQ96BR9 441 aa13.72□□□□□ -0.21
ACTB-204ENST00000425660 RASD2Q96D21 266 aa13.72□□□□□ -0.21
ACTB-204ENST00000425660 TMEM41AQ96HV5 264 aa13.72□□□□□ -0.21
ACTB-204ENST00000425660 ARL5BQ96KC2 179 aa13.72□□□□□ -0.21
ACTB-204ENST00000425660 Q96M85 177 aa13.72□□□□□ -0.21
ACTB-204ENST00000425660 DCUN1D5Q9BTE7 237 aa13.72□□□□□ -0.21
ACTB-204ENST00000425660 OR51V1Q9H2C8 321 aa13.72□□□□□ -0.21
ACTB-204ENST00000425660 ADGRL4Q9HBW9 690 aa13.72□□□□□ -0.21
ACTB-204ENST00000425660 ISYNA1Q9NPH2 558 aa13.72□□□□□ -0.21
ACTB-204ENST00000425660 ASCL3Q9NQ33 180 aa13.72□□□□□ -0.21
ACTB-204ENST00000425660 INPP5EQ9NRR6 644 aa13.72□□□□□ -0.21
ACTB-204ENST00000425660 ERVK13-1Q9NX77 482 aa13.72□□□□□ -0.21
ACTB-204ENST00000425660 SEC14L4Q9UDX3 406 aa13.72□□□□□ -0.21
ACTB-204ENST00000425660 SBK2P0C263 348 aa13.71□□□□□ -0.21
ACTB-204ENST00000425660 NR4A1P22736 598 aa13.71□□□□□ -0.21
ACTB-204ENST00000425660 FKBP2P26885 142 aaKnown RBP13.71□□□□□ -0.21
ACTB-204ENST00000425660 GRPRP30550 384 aa13.71□□□□□ -0.21
ACTB-204ENST00000425660 IDUAP35475 653 aa13.71□□□□□ -0.21
ACTB-204ENST00000425660 ATP6V1E1P36543 226 aa13.71□□□□□ -0.21
ACTB-204ENST00000425660 SLC35D3Q5M8T2 416 aa13.71□□□□□ -0.21
ACTB-204ENST00000425660 SLC6A19Q695T7 634 aa13.71□□□□□ -0.21
ACTB-204ENST00000425660 C3orf33Q6P1S2 294 aa13.71□□□□□ -0.21
ACTB-204ENST00000425660 B3GLCTQ6Y288 498 aa13.71□□□□□ -0.21
ACTB-204ENST00000425660 MDGA2Q7Z553 956 aa13.71□□□□□ -0.21
ACTB-204ENST00000425660 ACBD7Q8N6N7 88 aa13.71□□□□□ -0.21
ACTB-204ENST00000425660 IL22RA1Q8N6P7 574 aa13.71□□□□□ -0.21
ACTB-204ENST00000425660 OR52N1Q8NH53 320 aa13.71□□□□□ -0.21
ACTB-204ENST00000425660 SLC25A36Q96CQ1 311 aa13.71□□□□□ -0.21
ACTB-204ENST00000425660 TSPAN32Q96QS1 320 aa13.71□□□□□ -0.21
ACTB-204ENST00000425660 ARHGAP9Q9BRR9 750 aa13.71□□□□□ -0.21
ACTB-204ENST00000425660 GRHPRQ9UBQ7 328 aa13.71□□□□□ -0.21
ACTB-204ENST00000425660 VGLL3A8MV65 326 aa13.71□□□□□ -0.22
ACTB-204ENST00000425660 PLPP3O14495 311 aa13.71□□□□□ -0.22
ACTB-204ENST00000425660 AHCYL1O43865 530 aa13.71□□□□□ -0.22
ACTB-204ENST00000425660 AIREO43918 545 aa13.71□□□□□ -0.22
ACTB-204ENST00000425660 IGHMP01871 453 aa13.71□□□□□ -0.22
ACTB-204ENST00000425660 LIFP15018 202 aa13.71□□□□□ -0.22
ACTB-204ENST00000425660 ZNF182P17025 639 aaPredicted RBP13.71□□□□□ -0.22
ACTB-204ENST00000425660 RBMS1P29558 406 aaKnown RBP13.71□□□□□ -0.22
ACTB-204ENST00000425660 CDKN2AP42771 156 aaKnown RBP13.71□□□□□ -0.22
ACTB-204ENST00000425660 SLC25A1P53007 311 aa13.71□□□□□ -0.22
ACTB-204ENST00000425660 ACSM1Q08AH1 577 aa13.71□□□□□ -0.22
ACTB-204ENST00000425660 TSTQ16762 297 aaKnown RBP13.71□□□□□ -0.22
ACTB-204ENST00000425660 OR2G6Q5TZ20 316 aa13.71□□□□□ -0.22
ACTB-204ENST00000425660 MARCH9Q86YJ5 346 aa13.71□□□□□ -0.22
ACTB-204ENST00000425660 LSM14AQ8ND56 463 aaKnown RBP13.71□□□□□ -0.22
ACTB-204ENST00000425660 OR9Q1Q8NGQ5 310 aa13.71□□□□□ -0.22
ACTB-204ENST00000425660 TM9SF4Q92544 642 aa13.71□□□□□ -0.22
ACTB-204ENST00000425660 RPL3LQ92901 407 aaKnown RBP13.71□□□□□ -0.22
ACTB-204ENST00000425660 ASPNQ9BXN1 380 aa13.71□□□□□ -0.22
ACTB-204ENST00000425660 FANCFQ9NPI8 374 aa13.71□□□□□ -0.22
ACTB-204ENST00000425660 SERINC1Q9NRX5 453 aa13.71□□□□□ -0.22
ACTB-204ENST00000425660 FAM47E-STBD1D6RA91 191 aa13.7□□□□□ -0.22
ACTB-204ENST00000425660 TRIM3O75382 744 aaPredicted RBP13.7□□□□□ -0.22
ACTB-204ENST00000425660 GYPBP06028 91 aa13.7□□□□□ -0.22
ACTB-204ENST00000425660 SPI1P17947 270 aa13.7□□□□□ -0.22
ACTB-204ENST00000425660 IL11P20809 199 aa13.7□□□□□ -0.22
ACTB-204ENST00000425660 GADD45AP24522 165 aa13.7□□□□□ -0.22
ACTB-204ENST00000425660 DSCR4P56555 118 aaPredicted RBP13.7□□□□□ -0.22
ACTB-204ENST00000425660 RPS7P62081 194 aaKnown RBP13.7□□□□□ -0.22
ACTB-204ENST00000425660 LGALS3BPQ08380 585 aa13.7□□□□□ -0.22
ACTB-204ENST00000425660 DBPQ10586 325 aaPredicted RBP13.7□□□□□ -0.22
ACTB-204ENST00000425660 ZP4Q12836 540 aa13.7□□□□□ -0.22
ACTB-204ENST00000425660 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.7□□□□□ -0.226e-18■□□□□ 8.9
ACTB-204ENST00000425660 TIMM50Q3ZCQ8 353 aa13.7□□□□□ -0.22
ACTB-204ENST00000425660 MESTQ5EB52 335 aa13.7□□□□□ -0.22
ACTB-204ENST00000425660 TIGD3Q6B0B8 471 aa13.7□□□□□ -0.22
ACTB-204ENST00000425660 LHFPL3Q86UP9 236 aa13.7□□□□□ -0.22
ACTB-204ENST00000425660 ZNF227Q86WZ6 799 aa13.7□□□□□ -0.22
ACTB-204ENST00000425660 GTPBP8Q8N3Z3 284 aaPredicted RBP13.7□□□□□ -0.22
ACTB-204ENST00000425660 EXD3Q8N9H8 876 aa13.7□□□□□ -0.22
ACTB-204ENST00000425660 POMGNT2Q8NAT1 580 aa13.7□□□□□ -0.22
ACTB-204ENST00000425660 ZNF417Q8TAU3 575 aa13.7□□□□□ -0.22
ACTB-204ENST00000425660 ZPLD1Q8TCW7 415 aa13.7□□□□□ -0.22
ACTB-204ENST00000425660 SLC25A43Q8WUT9 341 aaPredicted RBP13.7□□□□□ -0.22
ACTB-204ENST00000425660 ADAMTS14Q8WXS8 1223 aa13.7□□□□□ -0.22
ACTB-204ENST00000425660 THOC3Q96J01 351 aaKnown RBP13.7□□□□□ -0.22
ACTB-204ENST00000425660 ZNF587Q96SQ5 575 aaPredicted RBP13.7□□□□□ -0.22
ACTB-204ENST00000425660 TIMP4Q99727 224 aa13.7□□□□□ -0.22
ACTB-204ENST00000425660 INIPQ9NRY2 104 aa13.7□□□□□ -0.22
ACTB-204ENST00000425660 NDUFB11Q9NX14 153 aa13.7□□□□□ -0.22
ACTB-204ENST00000425660 SPIN1Q9Y657 262 aaPredicted RBP13.7□□□□□ -0.22
ACTB-204ENST00000425660 NPIPB13A6NJU9 1138 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 LIPT2A6NK58 231 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 C12orf71A8MTZ7 269 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 SHISA8B8ZZ34 492 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 NPIPB4C9JG80 1138 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 IMPDH2P12268 514 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 CPEP16870 476 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 CYB561P49447 251 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 CLK1P49759 484 aaKnown RBP13.69□□□□□ -0.22
ACTB-204ENST00000425660 DIO1P49895 249 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 SLC16A1P53985 500 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms