RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 CPNE2Q96FN4 548 aaPredicted RBP12.36□□□□□ -0.43
LRCH3-203ENST00000425562 MENTQ9BUN1 341 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 ZNF471Q9BX82 626 aaPredicted RBP12.36□□□□□ -0.43
LRCH3-203ENST00000425562 ACTRT3Q9BYD9 372 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 NKX6-2Q9C056 277 aaPredicted RBP12.36□□□□□ -0.43
LRCH3-203ENST00000425562 PRDM7Q9NQW5 492 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 APOBEC3BQ9UH17 382 aaKnown RBP12.36□□□□□ -0.43
LRCH3-203ENST00000425562 ATPIF1Q9UII2 106 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 MAFFQ9ULX9 164 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 GPR34Q9UPC5 381 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 FOXJ3Q9UPW0 622 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 SLC35A3Q9Y2D2 325 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 EDDM13A0A1B0GTR0 161 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 C17orf113A0A1B0GUU1 675 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 SYT5O00445 386 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 ADAM11O75078 769 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 GTF2F2P13984 249 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 TAS2R20P59543 309 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 TNFRSF17Q02223 184 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 TAF13Q15543 124 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 FAM69AQ5T7M9 428 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 ABHD17CQ6PCB6 329 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 UNQ6126/PRO20091Q6UXV3 157 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 RANBP3LQ86VV4 465 aaPredicted RBP12.36□□□□□ -0.43
LRCH3-203ENST00000425562 CDH26Q8IXH8 852 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 OR5M9Q8NGP3 310 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 LILRB1Q8NHL6 650 aaPredicted RBP12.36□□□□□ -0.43
LRCH3-203ENST00000425562 RASD2Q96D21 266 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 ZNF514Q96K75 400 aaPredicted RBP12.36□□□□□ -0.43
LRCH3-203ENST00000425562 Q96M85 177 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 EXO5Q9H790 373 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 TRPV4Q9HBA0 871 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 PRELID3BQ9Y3B1 194 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 RNF215Q9Y6U7 377 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 CFAP54Q96N23 3096 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 GRXCR1A8MXD5 290 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 DISC1C4P0D8 188 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 H7C1C5 153 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 H7C2Y5 167 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 M0QYG6 137 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 TIMP1P01033 207 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 GNRH1P01148 92 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 NGFRP08138 427 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 DLX5P56178 289 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 LCN6P62502 163 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 CTAG1AP78358 180 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 IKZF1Q13422 519 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 FAM78AQ5JUQ0 283 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 METRNLQ641Q3 311 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 PWWP2BQ6NUJ5 590 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 SLC48A1Q6P1K1 146 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 RNF44Q7L0R7 432 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 SLC35F2Q8IXU6 374 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 CMIPQ8IY22 773 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 OR2AK2Q8NG84 335 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 OR51A4Q8NGJ6 313 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 OR2A1Q8NGT9 310 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 LINC00615Q96LM1 132 aaPredicted RBP12.36□□□□□ -0.43
LRCH3-203ENST00000425562 TSNAXQ99598 290 aaKnown RBP12.36□□□□□ -0.43
LRCH3-203ENST00000425562 MRPS30Q9NP92 439 aaKnown RBP12.36□□□□□ -0.43
LRCH3-203ENST00000425562 ACTR10Q9NZ32 417 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 MED31Q9Y3C7 131 aa12.36□□□□□ -0.43
LRCH3-203ENST00000425562 NUP210Q8TEM1 1887 aaPredicted RBP12.35□□□□□ -0.43
LRCH3-203ENST00000425562 RTTNQ86VV8 2226 aa12.35□□□□□ -0.43
LRCH3-203ENST00000425562 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.35□□□□□ -0.43
LRCH3-203ENST00000425562 A0A1W2PP55 124 aa12.35□□□□□ -0.43
LRCH3-203ENST00000425562 CARNS1A5YM72 827 aa12.35□□□□□ -0.43
LRCH3-203ENST00000425562 VEGFDO43915 354 aa12.35□□□□□ -0.43
LRCH3-203ENST00000425562 PRAF2O60831 178 aa12.35□□□□□ -0.43
LRCH3-203ENST00000425562 B3GALNT1O75752 331 aa12.35□□□□□ -0.43
LRCH3-203ENST00000425562 RCBTB2O95199 551 aa12.35□□□□□ -0.43
LRCH3-203ENST00000425562 DPP4P27487 766 aa12.35□□□□□ -0.43
LRCH3-203ENST00000425562 VASPP50552 380 aaPredicted RBP12.35□□□□□ -0.43
LRCH3-203ENST00000425562 RAG2P55895 527 aa12.35□□□□□ -0.43
LRCH3-203ENST00000425562 UBE2IP63279 158 aaKnown RBP12.35□□□□□ -0.43
LRCH3-203ENST00000425562 IGSF11Q5DX21 431 aa12.35□□□□□ -0.43
LRCH3-203ENST00000425562 HACD4Q5VWC8 232 aa12.35□□□□□ -0.43
LRCH3-203ENST00000425562 MFSD12Q6NUT3 480 aa12.35□□□□□ -0.43
LRCH3-203ENST00000425562 TSSK4Q6SA08 328 aa12.35□□□□□ -0.43
LRCH3-203ENST00000425562 ZNF546Q86UE3 836 aa12.35□□□□□ -0.43
LRCH3-203ENST00000425562 SPPL3Q8TCT6 385 aa12.35□□□□□ -0.43
LRCH3-203ENST00000425562 C3orf49Q96BT1 292 aa12.35□□□□□ -0.43
LRCH3-203ENST00000425562 GIMAP5Q96F15 307 aa12.35□□□□□ -0.43
LRCH3-203ENST00000425562 CMSS1Q9BQ75 279 aaKnown RBP12.35□□□□□ -0.43
LRCH3-203ENST00000425562 ESRP2Q9H6T0 727 aaKnown RBP12.35□□□□□ -0.43
LRCH3-203ENST00000425562 ASF1BQ9NVP2 202 aa12.35□□□□□ -0.43
LRCH3-203ENST00000425562 V9GY05 133 aa12.35□□□□□ -0.43
LRCH3-203ENST00000425562 ANKRD20A5PA0PJZ0 165 aa12.35□□□□□ -0.43
LRCH3-203ENST00000425562 MCIDASD6RGH6 385 aa12.35□□□□□ -0.43
LRCH3-203ENST00000425562 CDC123O75794 336 aaPredicted RBP12.35□□□□□ -0.43
LRCH3-203ENST00000425562 NDUFB6O95139 128 aa12.35□□□□□ -0.43
LRCH3-203ENST00000425562 GPANK1O95872 356 aa12.35□□□□□ -0.43
LRCH3-203ENST00000425562 CD3DP04234 171 aa12.35□□□□□ -0.43
LRCH3-203ENST00000425562 GALP22466 123 aa12.35□□□□□ -0.43
LRCH3-203ENST00000425562 DDX6P26196 483 aaKnown RBP eCLIP12.35□□□□□ -0.43
LRCH3-203ENST00000425562 PRKAR1BP31321 381 aa12.35□□□□□ -0.43
LRCH3-203ENST00000425562 TAS2R43P59537 309 aa12.35□□□□□ -0.43
LRCH3-203ENST00000425562 AP3S2P59780 193 aa12.35□□□□□ -0.43
LRCH3-203ENST00000425562 AMZ1Q400G9 498 aa12.35□□□□□ -0.43
LRCH3-203ENST00000425562 RD3Q7Z3Z2 195 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms