RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 LCN1P1Q5VSP4 162 aa23.96■■□□□ 1.43
LDB1-202ENST00000425280 RPS19BP1Q86WX3 136 aaKnown RBP23.96■■□□□ 1.43
LDB1-202ENST00000425280 KLBQ86Z14 1044 aa23.96■■□□□ 1.43
LDB1-202ENST00000425280 OR2M3Q8NG83 312 aa23.96■■□□□ 1.43
LDB1-202ENST00000425280 TMEM203Q969S6 136 aa23.96■■□□□ 1.43
LDB1-202ENST00000425280 DACH2Q96NX9 599 aa23.96■■□□□ 1.43
LDB1-202ENST00000425280 PLGRKTQ9HBL7 147 aa23.96■■□□□ 1.43
LDB1-202ENST00000425280 SSR3Q9UNL2 185 aa23.96■■□□□ 1.43
LDB1-202ENST00000425280 SSR4P51571 173 aa23.95■■□□□ 1.42
LDB1-202ENST00000425280 MLF1P58340 268 aa23.95■■□□□ 1.42
LDB1-202ENST00000425280 ZNF85Q03923 595 aa23.95■■□□□ 1.42
LDB1-202ENST00000425280 TRIP6Q15654 476 aaKnown RBP23.95■■□□□ 1.42
LDB1-202ENST00000425280 PLPPR5Q32ZL2 321 aa23.95■■□□□ 1.42
LDB1-202ENST00000425280 SLC35D3Q5M8T2 416 aa23.95■■□□□ 1.42
LDB1-202ENST00000425280 TMEM164Q5U3C3 297 aa23.95■■□□□ 1.42
LDB1-202ENST00000425280 PIP4P1Q86T03 277 aa23.95■■□□□ 1.42
LDB1-202ENST00000425280 CCDC59Q9P031 241 aaKnown RBP23.95■■□□□ 1.42
LDB1-202ENST00000425280 SHISA8B8ZZ34 492 aa23.95■■□□□ 1.42
LDB1-202ENST00000425280 C11orf98E9PRG8 122 aa23.95■■□□□ 1.42
LDB1-202ENST00000425280 OR2T1O43869 369 aa23.95■■□□□ 1.42
LDB1-202ENST00000425280 RPS15P62841 145 aaKnown RBP23.95■■□□□ 1.42
LDB1-202ENST00000425280 KRR1Q13601 381 aaKnown RBP23.95■■□□□ 1.42
LDB1-202ENST00000425280 IL10RAQ13651 578 aa23.95■■□□□ 1.42
LDB1-202ENST00000425280 MESTQ5EB52 335 aa23.95■■□□□ 1.42
LDB1-202ENST00000425280 SLC25A53Q5H9E4 307 aa23.95■■□□□ 1.42
LDB1-202ENST00000425280 PRAMEF20Q5VT98 475 aa23.95■■□□□ 1.42
LDB1-202ENST00000425280 GPR139Q6DWJ6 353 aa23.95■■□□□ 1.42
LDB1-202ENST00000425280 LINC00299Q6ZSB3 139 aa23.95■■□□□ 1.42
LDB1-202ENST00000425280 ARMC10Q8N2F6 343 aa23.95■■□□□ 1.42
LDB1-202ENST00000425280 EXD3Q8N9H8 876 aa23.95■■□□□ 1.42
LDB1-202ENST00000425280 POMGNT2Q8NAT1 580 aa23.95■■□□□ 1.42
LDB1-202ENST00000425280 FBXL2Q9UKC9 423 aa23.95■■□□□ 1.42
LDB1-202ENST00000425280 ZNF346Q9UL40 294 aaKnown RBP23.95■■□□□ 1.42
LDB1-202ENST00000425280 METTL15A6NJ78 407 aa23.94■■□□□ 1.42
LDB1-202ENST00000425280 PRR33A8MZF0 331 aa23.94■■□□□ 1.42
LDB1-202ENST00000425280 FTCDNL1E5RQL4 147 aa23.94■■□□□ 1.42
LDB1-202ENST00000425280 DXOO77932 396 aaKnown RBP23.94■■□□□ 1.42
LDB1-202ENST00000425280 TFP02787 698 aa23.94■■□□□ 1.42
LDB1-202ENST00000425280 SLC25A1P53007 311 aa23.94■■□□□ 1.42
LDB1-202ENST00000425280 ACTC1P68032 377 aa23.94■■□□□ 1.42
LDB1-202ENST00000425280 ACTA1P68133 377 aa23.94■■□□□ 1.42
LDB1-202ENST00000425280 SNTA1Q13424 505 aa23.94■■□□□ 1.42
LDB1-202ENST00000425280 SLC6A19Q695T7 634 aa23.94■■□□□ 1.42
LDB1-202ENST00000425280 ESX1Q8N693 406 aa23.94■■□□□ 1.42
LDB1-202ENST00000425280 WDSUB1Q8N9V3 476 aa23.94■■□□□ 1.42
LDB1-202ENST00000425280 OR6S1Q8NH40 331 aa23.94■■□□□ 1.42
LDB1-202ENST00000425280 FRMD6Q96NE9 622 aa23.94■■□□□ 1.42
LDB1-202ENST00000425280 CNN2Q99439 309 aaKnown RBP23.94■■□□□ 1.42
LDB1-202ENST00000425280 RPRD1BQ9NQG5 326 aaKnown RBP23.94■■□□□ 1.42
LDB1-202ENST00000425280 A0A1W2PQL4 384 aaPredicted RBP23.93■■□□□ 1.42
LDB1-202ENST00000425280 Q0VFX4 171 aa23.93■■□□□ 1.42
LDB1-202ENST00000425280 TMEM81Q6P7N7 255 aa23.93■■□□□ 1.42
LDB1-202ENST00000425280 FADS6Q8N9I5 356 aa23.93■■□□□ 1.42
LDB1-202ENST00000425280 OR6Q1Q8NGQ2 317 aa23.93■■□□□ 1.42
LDB1-202ENST00000425280 MCFD2Q8NI22 146 aa23.93■■□□□ 1.42
LDB1-202ENST00000425280 POC1BQ8TC44 478 aa23.93■■□□□ 1.42
LDB1-202ENST00000425280 ARL5BQ96KC2 179 aa23.93■■□□□ 1.42
LDB1-202ENST00000425280 MRGPRX4Q96LA9 322 aa23.93■■□□□ 1.42
LDB1-202ENST00000425280 WDR70Q9NW82 654 aa23.93■■□□□ 1.42
LDB1-202ENST00000425280 BABAM2Q9NXR7 383 aa23.93■■□□□ 1.42
LDB1-202ENST00000425280 ZNF208O43345 1280 aa23.93■■□□□ 1.42
LDB1-202ENST00000425280 EFNA2O43921 213 aa23.93■■□□□ 1.42
LDB1-202ENST00000425280 HPP00738 406 aa23.93■■□□□ 1.42
LDB1-202ENST00000425280 GABRA5P31644 462 aa23.93■■□□□ 1.42
LDB1-202ENST00000425280 HCCSP53701 268 aa23.93■■□□□ 1.42
LDB1-202ENST00000425280 ZNF829Q3KNS6 432 aaPredicted RBP23.93■■□□□ 1.42
LDB1-202ENST00000425280 ATP6V1C2Q8NEY4 427 aa23.93■■□□□ 1.42
LDB1-202ENST00000425280 ZNF417Q8TAU3 575 aa23.93■■□□□ 1.42
LDB1-202ENST00000425280 ZNF587Q96SQ5 575 aaPredicted RBP23.93■■□□□ 1.42
LDB1-202ENST00000425280 TM9SF2Q99805 663 aa23.93■■□□□ 1.42
LDB1-202ENST00000425280 INIPQ9NRY2 104 aa23.93■■□□□ 1.42
LDB1-202ENST00000425280 TXNL4BQ9NX01 149 aaKnown RBP23.93■■□□□ 1.42
LDB1-202ENST00000425280 ZNF670-ZNF695F2Z2N8 137 aa23.92■■□□□ 1.42
LDB1-202ENST00000425280 PLPP3O14495 311 aa23.92■■□□□ 1.42
LDB1-202ENST00000425280 RNF13O43567 381 aa23.92■■□□□ 1.42
LDB1-202ENST00000425280 GLCEO94923 617 aa23.92■■□□□ 1.42
LDB1-202ENST00000425280 ICAM2P13598 275 aa23.92■■□□□ 1.42
LDB1-202ENST00000425280 CELP19835 753 aa23.92■■□□□ 1.42
LDB1-202ENST00000425280 NAA10P41227 235 aaPredicted RBP23.92■■□□□ 1.42
LDB1-202ENST00000425280 BDH1Q02338 343 aa23.92■■□□□ 1.42
LDB1-202ENST00000425280 DNASE1L3Q13609 305 aa23.92■■□□□ 1.42
LDB1-202ENST00000425280 ZNF404Q494X3 552 aa23.92■■□□□ 1.42
LDB1-202ENST00000425280 LINC01590Q5TEZ4 76 aa23.92■■□□□ 1.42
LDB1-202ENST00000425280 OR6K6Q8NGW6 343 aa23.92■■□□□ 1.42
LDB1-202ENST00000425280 PCSK5Q92824 1860 aa23.92■■□□□ 1.42
LDB1-202ENST00000425280 TSSK2Q96PF2 358 aa23.92■■□□□ 1.42
LDB1-202ENST00000425280 CDADC1Q9BWV3 514 aa23.92■■□□□ 1.42
LDB1-202ENST00000425280 MRPL39Q9NYK5 338 aaKnown RBP23.92■■□□□ 1.42
LDB1-202ENST00000425280 PCNX2A6NKB5 2137 aa23.92■■□□□ 1.42
LDB1-202ENST00000425280 EML6Q6ZMW3 1958 aa23.92■■□□□ 1.42
LDB1-202ENST00000425280 SLC30A4O14863 429 aa23.91■■□□□ 1.42
LDB1-202ENST00000425280 IL11P20809 199 aa23.91■■□□□ 1.42
LDB1-202ENST00000425280 F8A1P23610 371 aa23.91■■□□□ 1.42
LDB1-202ENST00000425280 PYCR1P32322 319 aa23.91■■□□□ 1.42
LDB1-202ENST00000425280 SSX6Q7RTT6 188 aa23.91■■□□□ 1.42
LDB1-202ENST00000425280 RFLNBQ8N5W9 214 aa23.91■■□□□ 1.42
LDB1-202ENST00000425280 DDIT4LQ96D03 193 aa23.91■■□□□ 1.42
LDB1-202ENST00000425280 C1GALT1C1Q96EU7 318 aa23.91■■□□□ 1.42
LDB1-202ENST00000425280 NXF2Q9GZY0 626 aaKnown RBP23.91■■□□□ 1.42
LDB1-202ENST00000425280 SH2D2AQ9NP31 389 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms