RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 ZCCHC18P0CG32 403 aa12.95□□□□□ -0.34
ATG4B-209ENST00000425239 DAOP14920 347 aa12.95□□□□□ -0.34
ATG4B-209ENST00000425239 UQCRBP14927 111 aa12.95□□□□□ -0.34
ATG4B-209ENST00000425239 ARF1P84077 181 aaKnown RBP12.95□□□□□ -0.34
ATG4B-209ENST00000425239 ROR2Q01974 943 aaKnown RBP12.95□□□□□ -0.34
ATG4B-209ENST00000425239 LRRC74AQ0VAA2 488 aa12.95□□□□□ -0.34
ATG4B-209ENST00000425239 BST1Q10588 318 aa12.95□□□□□ -0.34
ATG4B-209ENST00000425239 SQLEQ14534 574 aa12.95□□□□□ -0.34
ATG4B-209ENST00000425239 LIN52Q52LA3 116 aa12.95□□□□□ -0.34
ATG4B-209ENST00000425239 PRAMEF8Q5VWM4 474 aa12.95□□□□□ -0.34
ATG4B-209ENST00000425239 PRAMEF7Q5VXH5 474 aa12.95□□□□□ -0.34
ATG4B-209ENST00000425239 VHLLQ6RSH7 139 aa12.95□□□□□ -0.34
ATG4B-209ENST00000425239 ZNF786Q8N393 782 aa12.95□□□□□ -0.34
ATG4B-209ENST00000425239 CADM2Q8N3J6 435 aa12.95□□□□□ -0.34
ATG4B-209ENST00000425239 HPS1Q92902 700 aa12.95□□□□□ -0.34
ATG4B-209ENST00000425239 VPS33AQ96AX1 596 aa12.95□□□□□ -0.34
ATG4B-209ENST00000425239 KTI12Q96EK9 354 aaPredicted RBP12.95□□□□□ -0.34
ATG4B-209ENST00000425239 TAPBPLQ9BX59 468 aa12.95□□□□□ -0.34
ATG4B-209ENST00000425239 RAB1BQ9H0U4 201 aa12.95□□□□□ -0.34
ATG4B-209ENST00000425239 WDR55Q9H6Y2 383 aaPredicted RBP12.95□□□□□ -0.34
ATG4B-209ENST00000425239 A0A096LPI6 279 aa12.94□□□□□ -0.34
ATG4B-209ENST00000425239 LOC102725191A0A1B0GVB3 256 aa12.94□□□□□ -0.34
ATG4B-209ENST00000425239 KRT33AO76009 404 aa12.94□□□□□ -0.34
ATG4B-209ENST00000425239 KRT75O95678 551 aa12.94□□□□□ -0.34
ATG4B-209ENST00000425239 NPR2P20594 1047 aa12.94□□□□□ -0.34
ATG4B-209ENST00000425239 EPHA3P29320 983 aa12.94□□□□□ -0.34
ATG4B-209ENST00000425239 ANXA11P50995 505 aaKnown RBP12.94□□□□□ -0.34
ATG4B-209ENST00000425239 CLDN17P56750 224 aa12.94□□□□□ -0.34
ATG4B-209ENST00000425239 UBE2NP61088 152 aaKnown RBP12.94□□□□□ -0.34
ATG4B-209ENST00000425239 STX3Q13277 289 aa12.94□□□□□ -0.34
ATG4B-209ENST00000425239 TRIP10Q15642 601 aa12.94□□□□□ -0.34
ATG4B-209ENST00000425239 CARTPTQ16568 116 aa12.94□□□□□ -0.34
ATG4B-209ENST00000425239 GTDC1Q4AE62 458 aa12.94□□□□□ -0.34
ATG4B-209ENST00000425239 IQCCQ4KMZ1 466 aa12.94□□□□□ -0.34
ATG4B-209ENST00000425239 RPS26P11Q5JNZ5 115 aaPredicted RBP12.94□□□□□ -0.34
ATG4B-209ENST00000425239 PHYHD1Q5SRE7 291 aa12.94□□□□□ -0.34
ATG4B-209ENST00000425239 WDFY1Q8IWB7 410 aa12.94□□□□□ -0.34
ATG4B-209ENST00000425239 TMEM123Q8N131 208 aa12.94□□□□□ -0.34
ATG4B-209ENST00000425239 SVOPLQ8N434 492 aa12.94□□□□□ -0.34
ATG4B-209ENST00000425239 MREGQ8N565 214 aa12.94□□□□□ -0.34
ATG4B-209ENST00000425239 NEU4Q8WWR8 484 aaPredicted RBP12.94□□□□□ -0.34
ATG4B-209ENST00000425239 SPATA9Q9BWV2 254 aa12.94□□□□□ -0.34
ATG4B-209ENST00000425239 TPT1P8Q9HAU6 139 aa12.94□□□□□ -0.34
ATG4B-209ENST00000425239 GPR35Q9HC97 309 aa12.94□□□□□ -0.34
ATG4B-209ENST00000425239 RCE1Q9Y256 329 aa12.94□□□□□ -0.34
ATG4B-209ENST00000425239 A0A0G2JPF8 293 aa12.93□□□□□ -0.34
ATG4B-209ENST00000425239 HNRNPCL2B2RXH8 293 aa12.93□□□□□ -0.34
ATG4B-209ENST00000425239 HNRNPCL3B7ZW38 293 aa12.93□□□□□ -0.34
ATG4B-209ENST00000425239 LYNX1G3V0Z9 82 aa12.93□□□□□ -0.34
ATG4B-209ENST00000425239 hCG_2039718K7EN88 272 aa12.93□□□□□ -0.34
ATG4B-209ENST00000425239 RFXANKO14593 260 aa12.93□□□□□ -0.34
ATG4B-209ENST00000425239 HNRNPCL1O60812 293 aaKnown RBP12.93□□□□□ -0.34
ATG4B-209ENST00000425239 SNNO75324 88 aaPredicted RBP12.93□□□□□ -0.34
ATG4B-209ENST00000425239 BCHEP06276 602 aa12.93□□□□□ -0.34
ATG4B-209ENST00000425239 NUDT7P0C024 238 aa12.93□□□□□ -0.34
ATG4B-209ENST00000425239 HNRNPCL4P0DMR1 293 aa12.93□□□□□ -0.34
ATG4B-209ENST00000425239 LYNX1P0DP58 116 aa12.93□□□□□ -0.34
ATG4B-209ENST00000425239 HOXB9P17482 250 aaPredicted RBP12.93□□□□□ -0.34
ATG4B-209ENST00000425239 RPS5P46782 204 aaKnown RBP12.93□□□□□ -0.34
ATG4B-209ENST00000425239 CRISP3P54108 245 aa12.93□□□□□ -0.34
ATG4B-209ENST00000425239 SH3BGRP55822 239 aaPredicted RBP12.93□□□□□ -0.34
ATG4B-209ENST00000425239 COPZ1P61923 177 aa12.93□□□□□ -0.34
ATG4B-209ENST00000425239 HOXC5Q00444 222 aa12.93□□□□□ -0.34
ATG4B-209ENST00000425239 POU3F1Q03052 451 aaPredicted RBP12.93□□□□□ -0.34
ATG4B-209ENST00000425239 WDR93Q6P2C0 686 aa12.93□□□□□ -0.34
ATG4B-209ENST00000425239 C6orf89Q6UWU4 347 aa12.93□□□□□ -0.34
ATG4B-209ENST00000425239 COMTD1Q86VU5 262 aa12.93□□□□□ -0.34
ATG4B-209ENST00000425239 CDK20Q8IZL9 346 aa12.93□□□□□ -0.34
ATG4B-209ENST00000425239 RFLNBQ8N5W9 214 aa12.93□□□□□ -0.34
ATG4B-209ENST00000425239 GLB1L3Q8NCI6 653 aaPredicted RBP12.93□□□□□ -0.34
ATG4B-209ENST00000425239 TAAR8Q969N4 342 aa12.93□□□□□ -0.34
ATG4B-209ENST00000425239 SLC35B4Q969S0 331 aa12.93□□□□□ -0.34
ATG4B-209ENST00000425239 TMEM19Q96HH6 336 aa12.93□□□□□ -0.34
ATG4B-209ENST00000425239 MAELQ96JY0 434 aaKnown RBP12.93□□□□□ -0.34
ATG4B-209ENST00000425239 OXGR1Q96P68 337 aa12.93□□□□□ -0.34
ATG4B-209ENST00000425239 NOX3Q9HBY0 568 aa12.93□□□□□ -0.34
ATG4B-209ENST00000425239 MOV10Q9HCE1 1003 aaKnown RBP12.93□□□□□ -0.34
ATG4B-209ENST00000425239 BCL2L10Q9HD36 194 aa12.93□□□□□ -0.34
ATG4B-209ENST00000425239 P2RX2Q9UBL9 471 aa12.93□□□□□ -0.34
ATG4B-209ENST00000425239 TMEFF2Q9UIK5 374 aaPredicted RBP12.93□□□□□ -0.34
ATG4B-209ENST00000425239 FBXO9Q9UK97 447 aaPredicted RBP12.93□□□□□ -0.34
ATG4B-209ENST00000425239 IGKV1D-42A0A075B6H8 117 aa12.92□□□□□ -0.34
ATG4B-209ENST00000425239 MS4A18H0YCH9 400 aa12.92□□□□□ -0.34
ATG4B-209ENST00000425239 IL6P05231 212 aa12.92□□□□□ -0.34
ATG4B-209ENST00000425239 HNF1AP20823 631 aa12.92□□□□□ -0.34
ATG4B-209ENST00000425239 ARR3P36575 388 aa12.92□□□□□ -0.34
ATG4B-209ENST00000425239 CRATP43155 626 aa12.92□□□□□ -0.34
ATG4B-209ENST00000425239 CHN2P52757 468 aa12.92□□□□□ -0.34
ATG4B-209ENST00000425239 CDH15P55291 814 aa12.92□□□□□ -0.34
ATG4B-209ENST00000425239 WDR4P57081 412 aaKnown RBP12.92□□□□□ -0.34
ATG4B-209ENST00000425239 DSTNP60981 165 aa12.92□□□□□ -0.34
ATG4B-209ENST00000425239 MS4A18Q3C1V0 323 aa12.92□□□□□ -0.34
ATG4B-209ENST00000425239 LIPNQ5VXI9 398 aa12.92□□□□□ -0.34
ATG4B-209ENST00000425239 ZNF627Q7L945 461 aa12.92□□□□□ -0.34
ATG4B-209ENST00000425239 MDP1Q86V88 176 aa12.92□□□□□ -0.34
ATG4B-209ENST00000425239 KIRREL3Q8IZU9 778 aa12.92□□□□□ -0.34
ATG4B-209ENST00000425239 LSMEM1Q8N8F7 131 aa12.92□□□□□ -0.34
ATG4B-209ENST00000425239 LINC01356Q8N9X3 169 aa12.92□□□□□ -0.34
ATG4B-209ENST00000425239 SLC25A36Q96CQ1 311 aa12.92□□□□□ -0.34
ATG4B-209ENST00000425239 ANKRD27Q96NW4 1050 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms