RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 OR5V1Q9UGF6 321 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 A0A1B0GTQ1 180 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 C5orf52A6NGY3 159 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 OR2AT4A6NND4 320 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 MAN2B1O00754 1011 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 GSTZ1O43708 216 aaPredicted RBP10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 FKTNO75072 461 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 PPP1R3DO95685 299 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 BMP7P18075 431 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 LAG3P18627 525 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 NT5EP21589 574 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 EFNB2P52799 333 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 LBX1P52954 281 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 ATP1B3P54709 279 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 RPS11P62280 158 aaKnown RBP eCLIP10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 SLC36A1Q7Z2H8 476 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 MRGPREQ86SM8 312 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 STX12Q86Y82 276 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 TRAPPC5Q8IUR0 188 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 SNX33Q8WV41 574 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.37□□□□□ -0.752e-6■□□□□ 8.6
SEC61A1-202ENST00000424880 ADGRL4Q9HBW9 690 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 ABRACLQ9P1F3 81 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 TAC3Q9UHF0 121 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 FOXJ3Q9UPW0 622 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 OR51B4Q9Y5P0 310 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 IFITM5A6NNB3 132 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 KIAA0355O15063 1070 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 LCMT2O60294 686 aaKnown RBP10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 LATS1O95835 1130 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 ZDHHC11BP0C7U3 371 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 IFNGR2P38484 337 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 RPS27P42677 84 aaKnown RBP10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 ID4P47928 161 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 ZNF234Q14588 700 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 SCGB2B2Q4G0G5 96 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 KRBOX4Q5JUW0 171 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 C9orf64Q5T6V5 341 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 DMKNQ6E0U4 476 aaPredicted RBP10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 ZNF425Q6IV72 752 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 TET1Q8NFU7 2136 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 OR2AP1Q8NGE2 309 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 OR4K13Q8NH42 304 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 ZNF296Q8WUU4 475 aaPredicted RBP10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 ALG14Q96F25 216 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 LAT2Q9GZY6 243 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 SUV39H2Q9H5I1 410 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 RNF122Q9H9V4 155 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 DBX1A6NMT0 343 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 C4orf47A7E2U8 309 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 NEDD8-MDP1E9PL57 170 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 ZIC2O95409 532 aaPredicted RBP10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 C1orf105O95561 183 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 RPLP2P05387 115 aaKnown RBP10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 ASGR2P07307 311 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 ATXN8OSP0DMR3 200 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 MGMTP16455 207 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 NTSP30990 170 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 STAT5AP42229 794 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 TAS2R20P59543 309 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 AP3S2P59780 193 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 FOXK2Q01167 660 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 ALKBH1Q13686 389 aaKnown RBP10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 PEA15Q15121 130 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 LY6G6FQ5SQ64 297 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 NXPE4Q6UWF7 544 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 ETFBKMTQ8IXQ9 262 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 SEMA6DQ8NFY4 1073 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 ZDHHC12Q96GR4 267 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 ELF4Q99607 663 aaPredicted RBP10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 OR2S2Q9NQN1 319 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 DZANK1Q9NVP4 752 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 ZNF106Q9H2Y7 1883 aaKnown RBP10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 A0A0B4J2A0 478 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 OR14I1A6ND48 311 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 SDHAP31040 664 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 DLSTP36957 453 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 P2RY4P51582 365 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 NRG3P56975 720 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 LMAN2Q12907 356 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 NKPD1Q17RQ9 610 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 TCTN1Q2MV58 587 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 RNF212Q495C1 297 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 ELFN2Q5R3F8 820 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 FAM83HQ6ZRV2 1179 aaPredicted RBP10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 SLC24A5Q71RS6 500 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 TMPRSS12Q86WS5 348 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 GLB1L2Q8IW92 636 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 DCUN1D3Q8IWE4 304 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 STEAP2Q8NFT2 490 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 OR4A4PQ8NGN8 299 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 GRHL3Q8TE85 626 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 TMEM41AQ96HV5 264 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 UTP23Q9BRU9 249 aaKnown RBP10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 SELENOIQ9C0D9 397 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 SHPKQ9UHJ6 478 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 ST6GALNAC2Q9UJ37 374 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 CNTRLQ7Z7A1 2325 aa10.36□□□□□ -0.75
SEC61A1-202ENST00000424880 IGLV3-16A0A075B6K0 115 aa10.35□□□□□ -0.75
SEC61A1-202ENST00000424880 hCG_1809904A0A1W2PP81 198 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms