RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 GMEB1Q9Y692 573 aa11.39□□□□□ -0.59
VRK3-203ENST00000424804 IGHV4-30-2A0A087WSY4 118 aa11.38□□□□□ -0.59
VRK3-203ENST00000424804 A0A1B0GWA3 101 aa11.38□□□□□ -0.59
VRK3-203ENST00000424804 GMNCA6NCL1 334 aa11.38□□□□□ -0.59
VRK3-203ENST00000424804 CCT8L1PA6NM43 557 aa11.38□□□□□ -0.59
VRK3-203ENST00000424804 A8MVM7 634 aa11.38□□□□□ -0.59
VRK3-203ENST00000424804 FXYD1O00168 92 aa11.38□□□□□ -0.59
VRK3-203ENST00000424804 DYNC1I1O14576 645 aa11.38□□□□□ -0.59
VRK3-203ENST00000424804 ABCD4O14678 606 aa11.38□□□□□ -0.59
VRK3-203ENST00000424804 MFN2O95140 757 aa11.38□□□□□ -0.59
VRK3-203ENST00000424804 AKR7A3O95154 331 aa11.38□□□□□ -0.59
VRK3-203ENST00000424804 AHSA1O95433 338 aa11.38□□□□□ -0.59
VRK3-203ENST00000424804 GPIP06744 558 aa11.38□□□□□ -0.59
VRK3-203ENST00000424804 GGT1P19440 569 aa11.38□□□□□ -0.59
VRK3-203ENST00000424804 CBLP22681 906 aa11.38□□□□□ -0.59
VRK3-203ENST00000424804 HTR2AP28223 471 aa11.38□□□□□ -0.59
VRK3-203ENST00000424804 RPS5P46782 204 aaKnown RBP11.38□□□□□ -0.59
VRK3-203ENST00000424804 IL1RL1Q01638 556 aa11.38□□□□□ -0.59
VRK3-203ENST00000424804 GABRA6Q16445 453 aa11.38□□□□□ -0.59
VRK3-203ENST00000424804 ALG10BQ5I7T1 473 aa11.38□□□□□ -0.59
VRK3-203ENST00000424804 OTUD3Q5T2D3 398 aaPredicted RBP11.38□□□□□ -0.59
VRK3-203ENST00000424804 C1orf140Q5VVS0 124 aa11.38□□□□□ -0.59
VRK3-203ENST00000424804 PATL1Q86TB9 770 aaKnown RBP11.38□□□□□ -0.59
VRK3-203ENST00000424804 GPAT4Q86UL3 456 aa11.38□□□□□ -0.59
VRK3-203ENST00000424804 HIPK1Q86Z02 1210 aa11.38□□□□□ -0.59
VRK3-203ENST00000424804 SLC30A8Q8IWU4 369 aa11.38□□□□□ -0.59
VRK3-203ENST00000424804 BHLHE22Q8NFJ8 381 aaPredicted RBP11.38□□□□□ -0.59
VRK3-203ENST00000424804 OR8J3Q8NGG0 315 aa11.38□□□□□ -0.59
VRK3-203ENST00000424804 RP9Q8TA86 221 aaKnown RBP11.38□□□□□ -0.59
VRK3-203ENST00000424804 GTPBP3Q969Y2 492 aaKnown RBP11.38□□□□□ -0.59
VRK3-203ENST00000424804 AMBRA1Q9C0C7 1298 aa11.38□□□□□ -0.59
VRK3-203ENST00000424804 TRAPPC4Q9Y296 219 aa11.38□□□□□ -0.59
VRK3-203ENST00000424804 NOSIPQ9Y314 301 aaKnown RBP11.38□□□□□ -0.59
VRK3-203ENST00000424804 MALRD1Q5VYJ5 2156 aa11.37□□□□□ -0.59
VRK3-203ENST00000424804 ANK2Q01484 3957 aa11.37□□□□□ -0.59
VRK3-203ENST00000424804 A0A1W2PR80 420 aa11.37□□□□□ -0.59
VRK3-203ENST00000424804 SLC22A2O15244 555 aa11.37□□□□□ -0.59
VRK3-203ENST00000424804 EIF1BO60739 113 aaKnown RBP11.37□□□□□ -0.59
VRK3-203ENST00000424804 RAD51DO75771 328 aa11.37□□□□□ -0.59
VRK3-203ENST00000424804 NPPAP01160 153 aa11.37□□□□□ -0.59
VRK3-203ENST00000424804 DRD4P21917 467 aa11.37□□□□□ -0.59
VRK3-203ENST00000424804 TTKP33981 857 aa11.37□□□□□ -0.59
VRK3-203ENST00000424804 NUDT2P50583 147 aa11.37□□□□□ -0.59
VRK3-203ENST00000424804 MAP2K6P52564 334 aa11.37□□□□□ -0.59
VRK3-203ENST00000424804 CDH11P55287 796 aa11.37□□□□□ -0.59
VRK3-203ENST00000424804 PCBP3P57721 371 aaKnown RBP11.37□□□□□ -0.59
VRK3-203ENST00000424804 SLC25A3Q00325 362 aa11.37□□□□□ -0.59
VRK3-203ENST00000424804 OR1Q1Q15612 314 aa11.37□□□□□ -0.59
VRK3-203ENST00000424804 DUSP7Q16829 419 aa11.37□□□□□ -0.59
VRK3-203ENST00000424804 LRRC23Q53EV4 343 aaPredicted RBP11.37□□□□□ -0.59
VRK3-203ENST00000424804 CASP12Q6UXS9 341 aa11.37□□□□□ -0.59
VRK3-203ENST00000424804 NET1Q7Z628 596 aaPredicted RBP11.37□□□□□ -0.59
VRK3-203ENST00000424804 TREML1Q86YW5 311 aa11.37□□□□□ -0.59
VRK3-203ENST00000424804 TMEM99Q8N816 258 aa11.37□□□□□ -0.59
VRK3-203ENST00000424804 ZIC4Q8N9L1 334 aa11.37□□□□□ -0.59
VRK3-203ENST00000424804 SLC35B4Q969S0 331 aa11.37□□□□□ -0.59
VRK3-203ENST00000424804 MUCL1Q96DR8 90 aa11.37□□□□□ -0.59
VRK3-203ENST00000424804 MCHR1Q99705 422 aa11.37□□□□□ -0.59
VRK3-203ENST00000424804 WFDC6Q9BQY6 131 aa11.37□□□□□ -0.59
VRK3-203ENST00000424804 MALT1Q9UDY8 824 aa11.37□□□□□ -0.59
VRK3-203ENST00000424804 TESQ9UGI8 421 aaKnown RBP11.37□□□□□ -0.59
VRK3-203ENST00000424804 LIPT2A6NK58 231 aa11.36□□□□□ -0.59
VRK3-203ENST00000424804 CPSF4LA6NMK7 179 aaKnown RBP11.36□□□□□ -0.59
VRK3-203ENST00000424804 GPR171O14626 319 aa11.36□□□□□ -0.59
VRK3-203ENST00000424804 DNPH1O43598 174 aa11.36□□□□□ -0.59
VRK3-203ENST00000424804 TLX2O43763 284 aaPredicted RBP11.36□□□□□ -0.59
VRK3-203ENST00000424804 MRPL33O75394 65 aaKnown RBP11.36□□□□□ -0.59
VRK3-203ENST00000424804 CD40P25942 277 aa11.36□□□□□ -0.59
VRK3-203ENST00000424804 ZNF83P51522 516 aa11.36□□□□□ -0.59
VRK3-203ENST00000424804 TMEM225Q6GV28 225 aa11.36□□□□□ -0.59
VRK3-203ENST00000424804 RBM45Q8IUH3 476 aaKnown RBP11.36□□□□□ -0.59
VRK3-203ENST00000424804 C10orf53Q8N6V4 93 aa11.36□□□□□ -0.59
VRK3-203ENST00000424804 OR2T12Q8NG77 320 aa11.36□□□□□ -0.59
VRK3-203ENST00000424804 GPR32P1Q8NGA4 272 aa11.36□□□□□ -0.59
VRK3-203ENST00000424804 OR52N5Q8NH56 324 aa11.36□□□□□ -0.59
VRK3-203ENST00000424804 APH1AQ96BI3 265 aa11.36□□□□□ -0.59
VRK3-203ENST00000424804 TAMM41Q96BW9 452 aa11.36□□□□□ -0.59
VRK3-203ENST00000424804 KTI12Q96EK9 354 aaPredicted RBP11.36□□□□□ -0.59
VRK3-203ENST00000424804 SLC47A1Q96FL8 570 aa11.36□□□□□ -0.59
VRK3-203ENST00000424804 DHRS9Q9BPW9 319 aa11.36□□□□□ -0.59
VRK3-203ENST00000424804 FLVCR1Q9Y5Y0 555 aa11.36□□□□□ -0.59
VRK3-203ENST00000424804 TMEM229AB2RXF0 380 aa11.35□□□□□ -0.59
VRK3-203ENST00000424804 GSTA4O15217 222 aa11.35□□□□□ -0.59
VRK3-203ENST00000424804 SSX4O60224 188 aa11.35□□□□□ -0.59
VRK3-203ENST00000424804 SNX3O60493 162 aa11.35□□□□□ -0.59
VRK3-203ENST00000424804 SHOX2O60902 331 aaPredicted RBP11.35□□□□□ -0.59
VRK3-203ENST00000424804 LGI1O95970 557 aa11.35□□□□□ -0.59
VRK3-203ENST00000424804 PNMTP11086 282 aa11.35□□□□□ -0.59
VRK3-203ENST00000424804 TNFRSF1BP20333 461 aa11.35□□□□□ -0.59
VRK3-203ENST00000424804 PTAFRP25105 342 aa11.35□□□□□ -0.59
VRK3-203ENST00000424804 GZMMP51124 257 aa11.35□□□□□ -0.59
VRK3-203ENST00000424804 SLC17A1Q14916 467 aa11.35□□□□□ -0.59
VRK3-203ENST00000424804 MST1LQ2TV78 715 aa11.35□□□□□ -0.59
VRK3-203ENST00000424804 C9orf135Q5VTT2 229 aa11.35□□□□□ -0.59
VRK3-203ENST00000424804 ERICH5Q6P6B1 374 aa11.35□□□□□ -0.59
VRK3-203ENST00000424804 ULK3Q6PHR2 472 aa11.35□□□□□ -0.59
VRK3-203ENST00000424804 PAQR6Q6TCH4 344 aa11.35□□□□□ -0.59
VRK3-203ENST00000424804 SSX8Q7RTT4 187 aa11.35□□□□□ -0.59
VRK3-203ENST00000424804 CALHM3Q86XJ0 350 aa11.35□□□□□ -0.59
VRK3-203ENST00000424804 PIAS4Q8N2W9 510 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms