RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 CFHR4Q92496 578 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 TMEM45BQ96B21 275 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 DDIT4LQ96D03 193 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 THOC1Q96FV9 657 aaKnown RBP5.31□□□□□ -1.56
SDCBP-203ENST00000424270 ZNF385AQ96PM9 386 aaKnown RBP5.31□□□□□ -1.56
SDCBP-203ENST00000424270 CHID1Q9BWS9 393 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 SHCBP1LQ9BZQ2 653 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 TRIM15Q9C019 465 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 LAT2Q9GZY6 243 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 GLIPR2Q9H4G4 154 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 RNF121Q9H920 327 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 PATZ1Q9HBE1 687 aaKnown RBP5.31□□□□□ -1.56
SDCBP-203ENST00000424270 CTPS2Q9NRF8 586 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 VPS29Q9UBQ0 182 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 SLC7A8Q9UHI5 535 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 RPUSD1Q9UJJ7 312 aaKnown RBP5.31□□□□□ -1.56
SDCBP-203ENST00000424270 GRID1Q9ULK0 1009 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 NPTNQ9Y639 398 aa5.31□□□□□ -1.56
SDCBP-203ENST00000424270 WNK2Q9Y3S1 2297 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 CXorf49A8MYA2 514 aaPredicted RBP5.3□□□□□ -1.56
SDCBP-203ENST00000424270 ANKRD28O15084 1053 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 EIF4E2O60573 245 aaKnown RBP5.3□□□□□ -1.56
SDCBP-203ENST00000424270 PEX14O75381 377 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 UPK3AO75631 287 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 JTBO76095 146 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 MBD3O95983 291 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 HLA-HP01893 362 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 PF4P02776 101 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 IFNW1P05000 195 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 ANXA4P09525 319 aaPredicted RBP5.3□□□□□ -1.56
SDCBP-203ENST00000424270 UBTFL6P0CB48 400 aaPredicted RBP5.3□□□□□ -1.56
SDCBP-203ENST00000424270 PPIAL4GP0DN37 164 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 PF4V1P10720 104 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 ACP2P11117 423 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 IMPDH2P12268 514 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 DDCP20711 480 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 HOXD3P31249 432 aaPredicted RBP5.3□□□□□ -1.56
SDCBP-203ENST00000424270 STX2P32856 288 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 RYKP34925 604 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 TGFBR2P37173 567 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 ETV4P43268 484 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 ASMTP46597 345 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 SLC6A9P48067 706 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 SELENOPP49908 381 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 FGF12P61328 243 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 SLC35A2P78381 396 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 RBBP4Q09028 425 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 ILF2Q12905 390 aaKnown RBP5.3□□□□□ -1.56
SDCBP-203ENST00000424270 SLC17A1Q14916 467 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 PPP1R7Q15435 360 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 DUSP5Q16690 384 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 SLC25A53Q5H9E4 307 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 SPDYAQ5MJ70 313 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 C6orf89Q6UWU4 347 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 ANKMY2Q8IV38 441 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 IGDCC3Q8IVU1 814 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 CMIPQ8IY22 773 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 CCDC36Q8IYA8 594 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 NAT8LQ8N9F0 302 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 SPERTQ8NA61 448 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 C11orf40Q8WZ69 217 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 DDB2Q92466 427 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 CDS1Q92903 461 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 MAGOHBQ96A72 148 aaKnown RBP5.3□□□□□ -1.56
SDCBP-203ENST00000424270 BOD1Q96IK1 185 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 PLEKHA8Q96JA3 519 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 AMDHD1Q96NU7 426 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 MS4A4EQ96PG1 132 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 TSPAN32Q96QS1 320 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 ASCL2Q99929 193 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 SSBP3Q9BWW4 388 aaPredicted RBP5.3□□□□□ -1.56
SDCBP-203ENST00000424270 BTBD2Q9BX70 525 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 ACTRT3Q9BYD9 372 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 PPA2Q9H2U2 334 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 BRF2Q9HAW0 419 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 ACOXLQ9NUZ1 547 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 ADPRHL2Q9NX46 363 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 NKIRAS2Q9NYR9 191 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 GRHL1Q9NZI5 618 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 DTNAQ9Y4J8 743 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 USH1CQ9Y6N9 552 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 NOTCH3Q9UM47 2321 aa5.3□□□□□ -1.56
SDCBP-203ENST00000424270 IGHV2-70DA0A0C4DH43 119 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 A0A1W2PRX2 142 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 OR7A17O14581 309 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 FBXO24O75426 580 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 PIAS1O75925 651 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 RSL1D1O76021 490 aaKnown RBP5.29□□□□□ -1.56
SDCBP-203ENST00000424270 AKR7A3O95154 331 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 PSMG1O95456 288 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 CSTAP01040 98 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 F13BP05160 661 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 RPS2P15880 293 aaKnown RBP5.29□□□□□ -1.56
SDCBP-203ENST00000424270 FKBP2P26885 142 aaKnown RBP5.29□□□□□ -1.56
SDCBP-203ENST00000424270 TYK2P29597 1187 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 CAMK2DQ13557 499 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 OR7A5Q15622 319 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 ATP6AP1LQ52LC2 224 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 KLHL26Q53HC5 615 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 SPIN4Q56A73 249 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms