RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 SLC15A3Q8IY34 581 aa9.66□□□□□ -0.86
USP49-204ENST00000423567 ZNF433Q8N7K0 673 aaPredicted RBP9.66□□□□□ -0.86
USP49-204ENST00000423567 SCAIQ8N9R8 606 aa9.66□□□□□ -0.86
USP49-204ENST00000423567 ZNF417Q8TAU3 575 aa9.66□□□□□ -0.86
USP49-204ENST00000423567 ADAMTS16Q8TE57 1224 aa9.66□□□□□ -0.86
USP49-204ENST00000423567 PLPPR2Q96GM1 343 aa9.66□□□□□ -0.86
USP49-204ENST00000423567 TPD52L3Q96J77 140 aa9.66□□□□□ -0.86
USP49-204ENST00000423567 OXGR1Q96P68 337 aa9.66□□□□□ -0.86
USP49-204ENST00000423567 ZNF385AQ96PM9 386 aaKnown RBP9.66□□□□□ -0.86
USP49-204ENST00000423567 LRRC37BQ96QE4 947 aa9.66□□□□□ -0.86
USP49-204ENST00000423567 ZNF587Q96SQ5 575 aaPredicted RBP9.66□□□□□ -0.86
USP49-204ENST00000423567 KCTD14Q9BQ13 255 aaPredicted RBP9.66□□□□□ -0.86
USP49-204ENST00000423567 POLR2J2Q9GZM3 115 aaKnown RBP9.66□□□□□ -0.86
USP49-204ENST00000423567 POLR2J3Q9H1A7 115 aaKnown RBP9.66□□□□□ -0.86
USP49-204ENST00000423567 SLCO5A1Q9H2Y9 848 aa9.66□□□□□ -0.86
USP49-204ENST00000423567 LIME1Q9H400 295 aa9.66□□□□□ -0.86
USP49-204ENST00000423567 ALG2Q9H553 416 aa9.66□□□□□ -0.86
USP49-204ENST00000423567 ESRP2Q9H6T0 727 aaKnown RBP9.66□□□□□ -0.86
USP49-204ENST00000423567 PLEKHF2Q9H8W4 249 aa9.66□□□□□ -0.86
USP49-204ENST00000423567 SLC7A7Q9UM01 511 aa9.66□□□□□ -0.86
USP49-204ENST00000423567 USP22Q9UPT9 525 aa9.66□□□□□ -0.86
USP49-204ENST00000423567 DCHS2Q6V1P9 2916 aa9.65□□□□□ -0.86
USP49-204ENST00000423567 ZNF587BE7ETH6 402 aa9.65□□□□□ -0.86
USP49-204ENST00000423567 CXCR6O00574 342 aa9.65□□□□□ -0.86
USP49-204ENST00000423567 KLF4O43474 513 aa9.65□□□□□ -0.86
USP49-204ENST00000423567 OR6A2O95222 327 aa9.65□□□□□ -0.86
USP49-204ENST00000423567 CBLP22681 906 aa9.65□□□□□ -0.86
USP49-204ENST00000423567 P2RY4P51582 365 aa9.65□□□□□ -0.86
USP49-204ENST00000423567 IST1P53990 364 aa9.65□□□□□ -0.86
USP49-204ENST00000423567 CLDN17P56750 224 aa9.65□□□□□ -0.86
USP49-204ENST00000423567 PSME3P61289 254 aa9.65□□□□□ -0.86
USP49-204ENST00000423567 PMS2P3Q13401 168 aa9.65□□□□□ -0.86
USP49-204ENST00000423567 TSPO2Q5TGU0 170 aa9.65□□□□□ -0.86
USP49-204ENST00000423567 NIPAL3Q6P499 406 aa9.65□□□□□ -0.86
USP49-204ENST00000423567 KLHL24Q6TFL4 600 aa9.65□□□□□ -0.86
USP49-204ENST00000423567 UEVLDQ8IX04 471 aa9.65□□□□□ -0.86
USP49-204ENST00000423567 ZIC4Q8N9L1 334 aa9.65□□□□□ -0.86
USP49-204ENST00000423567 ADPRHL1Q8NDY3 354 aa9.65□□□□□ -0.86
USP49-204ENST00000423567 SLC41A3Q96GZ6 507 aa9.65□□□□□ -0.86
USP49-204ENST00000423567 SLC19A3Q9BZV2 496 aa9.65□□□□□ -0.86
USP49-204ENST00000423567 PCDHAC1Q9H158 963 aa9.65□□□□□ -0.86
USP49-204ENST00000423567 UBTD1Q9HAC8 227 aa9.65□□□□□ -0.86
USP49-204ENST00000423567 SPAG4Q9NPE6 437 aa9.65□□□□□ -0.86
USP49-204ENST00000423567 CCM2LQ9NUG4 571 aaPredicted RBP9.65□□□□□ -0.86
USP49-204ENST00000423567 RCE1Q9Y256 329 aa9.65□□□□□ -0.86
USP49-204ENST00000423567 OR5H1A6NKK0 313 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 KPNA4O00629 521 aaPredicted RBP9.64□□□□□ -0.87
USP49-204ENST00000423567 NME4O00746 187 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 CLOCKO15516 846 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 FZD7O75084 574 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 SLC43A1O75387 559 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 OR5F1O95221 314 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 ATE1O95260 518 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 ZNF682O95780 498 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 BGLAPP02818 100 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 HIST1H2ABP04908 130 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 CD3EP07766 207 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 UMPSP11172 480 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 PTNP21246 168 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 AHCYP23526 432 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 MPGP29372 298 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 NTF4P34130 210 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 GSK3BP49841 420 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 SELENOPP49908 381 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 CRYBA2P53672 197 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 SELENOWP63302 87 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 ACKR1Q16570 336 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 C9orf135Q5VTT2 229 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 HMBOX1Q6NT76 420 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 KLHL17Q6TDP4 642 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 LINC00114Q6XXX2 140 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 ZNF704Q6ZNC4 412 aaPredicted RBP9.64□□□□□ -0.87
USP49-204ENST00000423567 C20orf204Q6ZNR8 217 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 HIST3H2AQ7L7L0 130 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 PIGWQ7Z7B1 504 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 EPHX4Q8IUS5 362 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 KDM8Q8N371 416 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 C17orf78Q8N4C9 275 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 C1orf162Q8NEQ5 155 aaPredicted RBP9.64□□□□□ -0.87
USP49-204ENST00000423567 OR4D11Q8NGI4 311 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 HIST1H2ACQ93077 130 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 FAM162AQ96A26 154 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 FOXC2Q99958 501 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 SLC7A10Q9NS82 523 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 NDE1Q9NXR1 346 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 MRPL39Q9NYK5 338 aaKnown RBP9.64□□□□□ -0.87
USP49-204ENST00000423567 ADA2Q9NZK5 511 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 SEC14L4Q9UDX3 406 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 RNF115Q9Y4L5 304 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 MYO9AB2RTY4 2548 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 LRBAP50851 2863 aa9.64□□□□□ -0.87
USP49-204ENST00000423567 MPDZO75970 2070 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 POLQO75417 2590 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 LOC102725191A0A1B0GVB3 256 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 A0A1W2PPR1 153 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 CH25HO95992 272 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 IFNW1P05000 195 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 ITGA5P08648 1049 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 THRBP10828 461 aa9.63□□□□□ -0.87
USP49-204ENST00000423567 CDH2P19022 906 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms