RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 COL8A1P27658 744 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 AGTR1P30556 359 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 RRM2P31350 389 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 MAGEA2P43356 314 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 CTBP2P56545 445 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 SMIM11AP58511 58 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 PMS2P3Q13401 168 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 CCNIQ14094 377 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 SLC17A1Q14916 467 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 MFSD13AQ14CX5 517 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 PDK3Q15120 406 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 SEC23BQ15437 767 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 ZSCAN26Q16670 478 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 TMEM201Q5SNT2 666 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 ZNF787Q6DD87 383 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 ABLIM2Q6H8Q1 611 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 ZNF730Q6ZMV8 503 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 MBOAT2Q6ZWT7 520 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 H1FNTQ75WM6 255 aaPredicted RBP8.25□□□□□ -1.09
PDGFC-202ENST00000422544 RRM2BQ7LG56 351 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 MAMDC2Q7Z304 686 aaPredicted RBP8.25□□□□□ -1.09
PDGFC-202ENST00000422544 SLC46A3Q7Z3Q1 461 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 NUFIP2Q7Z417 695 aaKnown RBP8.25□□□□□ -1.09
PDGFC-202ENST00000422544 GPAT4Q86UL3 456 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 NRMQ8IXM6 262 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 RNF113BQ8IZP6 322 aaKnown RBP8.25□□□□□ -1.09
PDGFC-202ENST00000422544 RELL2Q8NC24 303 aaPredicted RBP8.25□□□□□ -1.09
PDGFC-202ENST00000422544 ZNF417Q8TAU3 575 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 PIGXQ8TBF5 258 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 SLC7A13Q8TCU3 470 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 ACOT11Q8WXI4 607 aaPredicted RBP8.25□□□□□ -1.09
PDGFC-202ENST00000422544 SLCO4A1Q96BD0 722 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 RSRC1Q96IZ7 334 aaKnown RBP8.25□□□□□ -1.09
PDGFC-202ENST00000422544 ZNF587Q96SQ5 575 aaPredicted RBP8.25□□□□□ -1.09
PDGFC-202ENST00000422544 SFXN3Q9BWM7 321 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 ASPNQ9BXN1 380 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 KRTAP3-3Q9BYR6 98 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 KRTAP3-2Q9BYR7 98 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 KLHL4Q9C0H6 718 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 ANKRD19PQ9H560 264 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 C12orf49Q9H741 205 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 BCO1Q9HAY6 547 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 CHST11Q9NPF2 352 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 NANSQ9NR45 359 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 MRPL39Q9NYK5 338 aaKnown RBP8.25□□□□□ -1.09
PDGFC-202ENST00000422544 B3GALT5Q9Y2C3 310 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 EMC9Q9Y3B6 208 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 CORINQ9Y5Q5 1042 aa8.25□□□□□ -1.09
PDGFC-202ENST00000422544 IGKV3D-15A0A087WSY6 115 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 A1L4Q6 167 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 ZNF724A8MTY0 619 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 EEF1E1-BLOC1S5C9J1V9 151 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 MS4A18H0YCH9 400 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 TNFRSF11BO00300 401 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 PLPP3O14495 311 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 EEF1E1O43324 174 aaKnown RBP8.24□□□□□ -1.09
PDGFC-202ENST00000422544 FZD7O75084 574 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 FKBP6O75344 327 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 SMNDC1O75940 238 aaKnown RBP eCLIP8.24□□□□□ -1.09
PDGFC-202ENST00000422544 KRT36O76013 467 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 OR7A10O76100 309 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 CLDN14O95500 239 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 HPRP00739 348 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 CGAP01215 116 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 HIST1H2ABP04908 130 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 ASAH2BP0C7U1 165 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 NQO1P15559 274 aaKnown RBP8.24□□□□□ -1.09
PDGFC-202ENST00000422544 MAKP20794 623 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 NTF4P34130 210 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 SLC16A1P53985 500 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 IL1RL1Q01638 556 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 PRKCDQ05655 676 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 PPP1R8Q12972 351 aaKnown RBP8.24□□□□□ -1.09
PDGFC-202ENST00000422544 MS4A18Q3C1V0 323 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 EEF1A1P5Q5VTE0 462 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 HIST3H2AQ7L7L0 130 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 LUZP2Q86TE4 346 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 SCAIQ8N9R8 606 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 ZNF610Q8N9Z0 462 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 PAPD5Q8NDF8 572 aaKnown RBP8.24□□□□□ -1.09
PDGFC-202ENST00000422544 OR9K2Q8NGE7 335 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 OR6K3Q8NGY3 331 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 OR5J2Q8NH18 312 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 HIST1H2ACQ93077 130 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 BPIFA2Q96DR5 249 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 ALPK1Q96QP1 1244 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 FUZQ9BT04 418 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 SF3B5Q9BWJ5 86 aaKnown RBP8.24□□□□□ -1.09
PDGFC-202ENST00000422544 OPN3Q9H1Y3 402 aaPredicted RBP8.24□□□□□ -1.09
PDGFC-202ENST00000422544 PIGMQ9H3S5 423 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 FKRPQ9H9S5 495 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 GP6Q9HCN6 339 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 KCNJ16Q9NPI9 418 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 PLSCR4Q9NRQ2 329 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 CCM2LQ9NUG4 571 aaPredicted RBP8.24□□□□□ -1.09
PDGFC-202ENST00000422544 VNN3Q9NY84 501 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 ZNF229Q9UJW7 825 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 PROCRQ9UNN8 238 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 RASD1Q9Y272 281 aa8.24□□□□□ -1.09
PDGFC-202ENST00000422544 SH3PXD2BA1X283 911 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms