RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 MELKQ14680 651 aa11.48□□□□□ -0.57
CLCN4-203ENST00000421085 PRICKLE2Q7Z3G6 844 aa11.48□□□□□ -0.57
CLCN4-203ENST00000421085 LPAR4Q99677 370 aa11.48□□□□□ -0.57
CLCN4-203ENST00000421085 OR51B6Q9H340 312 aa11.48□□□□□ -0.57
CLCN4-203ENST00000421085 ANKRD19PQ9H560 264 aa11.48□□□□□ -0.57
CLCN4-203ENST00000421085 ANKRD30BLA7E2S9 258 aa11.48□□□□□ -0.57
CLCN4-203ENST00000421085 SULT2B1O00204 365 aa11.48□□□□□ -0.57
CLCN4-203ENST00000421085 CCSO14618 274 aa11.48□□□□□ -0.57
CLCN4-203ENST00000421085 CLN5O75503 358 aa11.48□□□□□ -0.57
CLCN4-203ENST00000421085 ATPAF1Q5TC12 328 aaPredicted RBP11.48□□□□□ -0.57
CLCN4-203ENST00000421085 MOB3CQ70IA8 216 aa11.48□□□□□ -0.57
CLCN4-203ENST00000421085 FJX1Q86VR8 437 aa11.48□□□□□ -0.57
CLCN4-203ENST00000421085 HSD17B11Q8NBQ5 300 aa11.48□□□□□ -0.57
CLCN4-203ENST00000421085 TMEM59Q9BXS4 323 aa11.48□□□□□ -0.57
CLCN4-203ENST00000421085 ZMAT3Q9HA38 289 aaKnown RBP11.48□□□□□ -0.57
CLCN4-203ENST00000421085 SLC39A9Q9NUM3 307 aa11.48□□□□□ -0.57
CLCN4-203ENST00000421085 GAB2Q9UQC2 676 aa11.48□□□□□ -0.57
CLCN4-203ENST00000421085 CORINQ9Y5Q5 1042 aa11.48□□□□□ -0.57
CLCN4-203ENST00000421085 PHRF1Q9P1Y6 1649 aaKnown RBP11.48□□□□□ -0.57
CLCN4-203ENST00000421085 FOXE1O00358 373 aaPredicted RBP11.47□□□□□ -0.57
CLCN4-203ENST00000421085 BET1O15155 118 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 SRMP19623 302 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 VIPR2P41587 438 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 SLX4IPQ5VYV7 408 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 BPHLQ86WA6 291 aaPredicted RBP11.47□□□□□ -0.57
CLCN4-203ENST00000421085 ZNF768Q9H5H4 540 aaKnown RBP11.47□□□□□ -0.57
CLCN4-203ENST00000421085 TAF9BQ9HBM6 251 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 CDH20Q9HBT6 801 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 MPPED1O15442 326 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 CPMP14384 443 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 FOXK2Q01167 660 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 ZMAT1Q5H9K5 638 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 MSI2Q96DH6 328 aaKnown RBP11.47□□□□□ -0.57
CLCN4-203ENST00000421085 WIF1Q9Y5W5 379 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 MMP2P08253 660 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 SPI1P17947 270 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 PLGLAQ15195 96 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 ADIRFQ15847 76 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 OGFOD3Q6PK18 319 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 TMEM217Q8N7C4 229 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 C12orf76Q8N812 135 aaPredicted RBP11.47□□□□□ -0.57
CLCN4-203ENST00000421085 OR51S1Q8NGJ8 323 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 NMNAT3Q96T66 252 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 PARP12Q9H0J9 701 aaKnown RBP11.47□□□□□ -0.57
CLCN4-203ENST00000421085 METTL9Q9H1A3 318 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 FKRPQ9H9S5 495 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 EXOSC3Q9NQT5 275 aaKnown RBP11.47□□□□□ -0.57
CLCN4-203ENST00000421085 MED16Q9Y2X0 877 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 APOA2P02652 100 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 FCGR2AP12318 317 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 LAP3P28838 519 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 IAH1Q2TAA2 248 aaPredicted RBP11.47□□□□□ -0.57
CLCN4-203ENST00000421085 Q6ZTK2 550 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 ESPNLQ6ZVH7 1005 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 OR52N1Q8NH53 320 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 TMEM255BQ8WV15 326 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 NANOS1Q8WY41 292 aaKnown RBP11.47□□□□□ -0.57
CLCN4-203ENST00000421085 PIGCQ92535 297 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 C12orf57Q99622 126 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.47□□□□□ -0.57
CLCN4-203ENST00000421085 OR6C76A6NM76 312 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 B4GALT3O60512 393 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 AIFM1O95831 613 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 GIPP09681 153 aaPredicted RBP11.47□□□□□ -0.57
CLCN4-203ENST00000421085 RD3LP0DJH9 198 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 APLNRP35414 380 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 ATP1B3P54709 279 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 SNRPGP62308 76 aaKnown RBP11.47□□□□□ -0.57
CLCN4-203ENST00000421085 CRMP1Q14194 572 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 TESK1Q15569 626 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 DPPA4Q7L190 304 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 MCATQ8IVS2 390 aaKnown RBP11.47□□□□□ -0.57
CLCN4-203ENST00000421085 BSCL2Q96G97 398 aaPredicted RBP11.47□□□□□ -0.57
CLCN4-203ENST00000421085 ZNF629Q9UEG4 869 aaPredicted RBP11.47□□□□□ -0.57
CLCN4-203ENST00000421085 FBXL4Q9UKA2 621 aa11.47□□□□□ -0.57
CLCN4-203ENST00000421085 AKR7A2O43488 359 aa11.46□□□□□ -0.57
CLCN4-203ENST00000421085 CHRM4P08173 479 aa11.46□□□□□ -0.57
CLCN4-203ENST00000421085 FURINP09958 794 aa11.46□□□□□ -0.57
CLCN4-203ENST00000421085 TLE1Q04724 770 aa11.46□□□□□ -0.57
CLCN4-203ENST00000421085 HIST2H3AQ71DI3 136 aa11.46□□□□□ -0.57
CLCN4-203ENST00000421085 RDH10Q8IZV5 341 aa11.46□□□□□ -0.57
CLCN4-203ENST00000421085 LKAAEAR1Q8TD35 194 aa11.46□□□□□ -0.57
CLCN4-203ENST00000421085 SELENOIQ9C0D9 397 aa11.46□□□□□ -0.57
CLCN4-203ENST00000421085 EVA1AQ9H8M9 152 aa11.46□□□□□ -0.57
CLCN4-203ENST00000421085 CYTIPO60759 359 aa11.46□□□□□ -0.57
CLCN4-203ENST00000421085 FOXK1P85037 733 aa11.46□□□□□ -0.57
CLCN4-203ENST00000421085 POU3F1Q03052 451 aaPredicted RBP11.46□□□□□ -0.57
CLCN4-203ENST00000421085 MSMO1Q15800 293 aa11.46□□□□□ -0.57
CLCN4-203ENST00000421085 C2orf76Q3KRA6 126 aa11.46□□□□□ -0.57
CLCN4-203ENST00000421085 DPPA2Q7Z7J5 298 aa11.46□□□□□ -0.57
CLCN4-203ENST00000421085 NUDT22Q9BRQ3 303 aa11.46□□□□□ -0.57
CLCN4-203ENST00000421085 MOKQ9UQ07 419 aa11.46□□□□□ -0.57
CLCN4-203ENST00000421085 CDC20Q12834 499 aa11.46□□□□□ -0.57
CLCN4-203ENST00000421085 RAB33AQ14088 237 aa11.46□□□□□ -0.57
CLCN4-203ENST00000421085 SLC14A2Q15849 920 aa11.46□□□□□ -0.57
CLCN4-203ENST00000421085 DYNC2LI1Q8TCX1 351 aa11.46□□□□□ -0.57
CLCN4-203ENST00000421085 UHRF2Q96PU4 802 aa11.46□□□□□ -0.57
CLCN4-203ENST00000421085 TMEM43Q9BTV4 400 aa11.46□□□□□ -0.57
CLCN4-203ENST00000421085 CXorf36Q9H7Y0 433 aa11.46□□□□□ -0.57
CLCN4-203ENST00000421085 FMN2Q9NZ56 1722 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms