RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 MDGA2Q7Z553 956 aa18.93■□□□□ 0.62
GPC1-202ENST00000420138 ZNF485Q8NCK3 441 aa18.93■□□□□ 0.62
GPC1-202ENST00000420138 C1GALT1C1Q96EU7 318 aa18.93■□□□□ 0.62
GPC1-202ENST00000420138 MRGPRX4Q96LA9 322 aa18.93■□□□□ 0.62
GPC1-202ENST00000420138 Q96M85 177 aa18.93■□□□□ 0.62
GPC1-202ENST00000420138 JAM3Q9BX67 310 aa18.93■□□□□ 0.62
GPC1-202ENST00000420138 OR51V1Q9H2C8 321 aa18.93■□□□□ 0.62
GPC1-202ENST00000420138 RYDENQ9NUL5 291 aaKnown RBP18.93■□□□□ 0.62
GPC1-202ENST00000420138 HPF1Q9NWY4 346 aa18.93■□□□□ 0.62
GPC1-202ENST00000420138 TXNDC12O95881 172 aa18.93■□□□□ 0.62
GPC1-202ENST00000420138 ZNF41P51814 821 aaPredicted RBP18.93■□□□□ 0.62
GPC1-202ENST00000420138 CTXN1P60606 82 aa18.93■□□□□ 0.62
GPC1-202ENST00000420138 FOXK1P85037 733 aa18.93■□□□□ 0.62
GPC1-202ENST00000420138 KLHL12Q53G59 568 aa18.93■□□□□ 0.62
GPC1-202ENST00000420138 C5orf46Q6UWT4 87 aa18.93■□□□□ 0.62
GPC1-202ENST00000420138 MAMDC2Q7Z304 686 aaPredicted RBP18.93■□□□□ 0.62
GPC1-202ENST00000420138 IL22RA1Q8N6P7 574 aa18.93■□□□□ 0.62
GPC1-202ENST00000420138 OR6S1Q8NH40 331 aa18.93■□□□□ 0.62
GPC1-202ENST00000420138 RELTQ969Z4 430 aa18.93■□□□□ 0.62
GPC1-202ENST00000420138 ARL5BQ96KC2 179 aa18.93■□□□□ 0.62
GPC1-202ENST00000420138 NMNAT3Q96T66 252 aa18.93■□□□□ 0.62
GPC1-202ENST00000420138 NMNAT2Q9BZQ4 307 aa18.93■□□□□ 0.62
GPC1-202ENST00000420138 WDR12Q9GZL7 423 aaKnown RBP18.93■□□□□ 0.62
GPC1-202ENST00000420138 SLIRPQ9GZT3 109 aaKnown RBP18.93■□□□□ 0.62
GPC1-202ENST00000420138 OR51E2Q9H255 320 aa18.93■□□□□ 0.62
GPC1-202ENST00000420138 HMG20AQ9NP66 347 aa18.93■□□□□ 0.62
GPC1-202ENST00000420138 ASCL3Q9NQ33 180 aa18.93■□□□□ 0.62
GPC1-202ENST00000420138 SLC6A5Q9Y345 797 aa18.93■□□□□ 0.62
GPC1-202ENST00000420138 EXOSC1Q9Y3B2 195 aaKnown RBP18.93■□□□□ 0.62
GPC1-202ENST00000420138 CORINQ9Y5Q5 1042 aa18.93■□□□□ 0.62
GPC1-202ENST00000420138 AHCTF1Q8WYP5 2266 aa18.92■□□□□ 0.62
GPC1-202ENST00000420138 TEX13CA0A0J9YWL9 993 aa18.92■□□□□ 0.62
GPC1-202ENST00000420138 TMEM129A0AVI4 362 aa18.92■□□□□ 0.62
GPC1-202ENST00000420138 SLC22A31A6NKX4 558 aa18.92■□□□□ 0.62
GPC1-202ENST00000420138 J3QRK9 145 aa18.92■□□□□ 0.62
GPC1-202ENST00000420138 CCRL2O00421 344 aa18.92■□□□□ 0.62
GPC1-202ENST00000420138 ZNF208O43345 1280 aa18.92■□□□□ 0.62
GPC1-202ENST00000420138 DXOO77932 396 aaKnown RBP18.92■□□□□ 0.62
GPC1-202ENST00000420138 GYPBP06028 91 aa18.92■□□□□ 0.62
GPC1-202ENST00000420138 CD79BP40259 229 aa18.92■□□□□ 0.62
GPC1-202ENST00000420138 TMED1Q13445 227 aa18.92■□□□□ 0.62
GPC1-202ENST00000420138 SSX1Q16384 188 aa18.92■□□□□ 0.62
GPC1-202ENST00000420138 SGCBQ16585 318 aa18.92■□□□□ 0.62
GPC1-202ENST00000420138 TSTQ16762 297 aaKnown RBP18.92■□□□□ 0.62
GPC1-202ENST00000420138 TIMM50Q3ZCQ8 353 aa18.92■□□□□ 0.62
GPC1-202ENST00000420138 ACER2Q5QJU3 275 aa18.92■□□□□ 0.62
GPC1-202ENST00000420138 SLC22A10Q63ZE4 541 aa18.92■□□□□ 0.62
GPC1-202ENST00000420138 ATCAYQ86WG3 371 aa18.92■□□□□ 0.62
GPC1-202ENST00000420138 PLCZ1Q86YW0 608 aa18.92■□□□□ 0.62
GPC1-202ENST00000420138 FAM98AQ8NCA5 519 aaKnown RBP18.92■□□□□ 0.62
GPC1-202ENST00000420138 KBTBD8Q8NFY9 601 aa18.92■□□□□ 0.62
GPC1-202ENST00000420138 OR51G2Q8NGK0 314 aa18.92■□□□□ 0.62
GPC1-202ENST00000420138 OR6Q1Q8NGQ2 317 aa18.92■□□□□ 0.62
GPC1-202ENST00000420138 OR9Q1Q8NGQ5 310 aa18.92■□□□□ 0.62
GPC1-202ENST00000420138 ZNRF4Q8WWF5 429 aa18.92■□□□□ 0.62
GPC1-202ENST00000420138 SLC25A36Q96CQ1 311 aa18.92■□□□□ 0.62
GPC1-202ENST00000420138 AKIP1Q9NQ31 210 aa18.92■□□□□ 0.62
GPC1-202ENST00000420138 FREM2Q5SZK8 3169 aa18.91■□□□□ 0.62
GPC1-202ENST00000420138 ANKRD33BA6NCL7 494 aa18.91■□□□□ 0.62
GPC1-202ENST00000420138 OR6C68A6NDL8 312 aa18.91■□□□□ 0.62
GPC1-202ENST00000420138 AHSA1O95433 338 aa18.91■□□□□ 0.62
GPC1-202ENST00000420138 HIST1H2ABP04908 130 aa18.91■□□□□ 0.62
GPC1-202ENST00000420138 SCG5P05408 212 aa18.91■□□□□ 0.62
GPC1-202ENST00000420138 GRPRP30550 384 aa18.91■□□□□ 0.62
GPC1-202ENST00000420138 CDKN2AP42771 156 aaKnown RBP18.91■□□□□ 0.62
GPC1-202ENST00000420138 ARMC4Q5T2S8 1044 aa18.91■□□□□ 0.62
GPC1-202ENST00000420138 OR2G6Q5TZ20 316 aa18.91■□□□□ 0.62
GPC1-202ENST00000420138 IGF2-ASQ6U949 168 aa18.91■□□□□ 0.62
GPC1-202ENST00000420138 HIST3H2AQ7L7L0 130 aa18.91■□□□□ 0.62
GPC1-202ENST00000420138 ZNF227Q86WZ6 799 aa18.91■□□□□ 0.62
GPC1-202ENST00000420138 RAB43Q86YS6 212 aa18.91■□□□□ 0.62
GPC1-202ENST00000420138 OR5J2Q8NH18 312 aa18.91■□□□□ 0.62
GPC1-202ENST00000420138 HIST1H2ACQ93077 130 aa18.91■□□□□ 0.62
GPC1-202ENST00000420138 ANKRD10Q9NXR5 420 aa18.91■□□□□ 0.62
GPC1-202ENST00000420138 HAO2Q9NYQ3 351 aa18.91■□□□□ 0.62
GPC1-202ENST00000420138 B3GNT3Q9Y2A9 372 aa18.91■□□□□ 0.62
GPC1-202ENST00000420138 LOC100506127A0A0U1RQW1 187 aa18.9■□□□□ 0.62
GPC1-202ENST00000420138 DCDC2BA2VCK2 349 aa18.9■□□□□ 0.62
GPC1-202ENST00000420138 MYL12BO14950 172 aa18.9■□□□□ 0.62
GPC1-202ENST00000420138 OR2T1O43869 369 aa18.9■□□□□ 0.62
GPC1-202ENST00000420138 MYL12AP19105 171 aa18.9■□□□□ 0.62
GPC1-202ENST00000420138 PAICSP22234 425 aaKnown RBP18.9■□□□□ 0.62
GPC1-202ENST00000420138 SDHAP31040 664 aa18.9■□□□□ 0.62
GPC1-202ENST00000420138 SLC6A19Q695T7 634 aa18.9■□□□□ 0.62
GPC1-202ENST00000420138 LHFPL3Q86UP9 236 aa18.9■□□□□ 0.62
GPC1-202ENST00000420138 LSM14AQ8ND56 463 aaKnown RBP18.9■□□□□ 0.62
GPC1-202ENST00000420138 OR4K17Q8NGC6 315 aa18.9■□□□□ 0.62
GPC1-202ENST00000420138 TM9SF4Q92544 642 aa18.9■□□□□ 0.62
GPC1-202ENST00000420138 SGCZQ96LD1 299 aa18.9■□□□□ 0.62
GPC1-202ENST00000420138 TSPAN32Q96QS1 320 aa18.9■□□□□ 0.62
GPC1-202ENST00000420138 ERVK13-1Q9NX77 482 aa18.9■□□□□ 0.62
GPC1-202ENST00000420138 TNFRSF10DQ9UBN6 386 aa18.9■□□□□ 0.62
GPC1-202ENST00000420138 SNPHO15079 494 aa18.9■□□□□ 0.62
GPC1-202ENST00000420138 IMPDH2P12268 514 aa18.9■□□□□ 0.62
GPC1-202ENST00000420138 MAP2K6P52564 334 aa18.9■□□□□ 0.62
GPC1-202ENST00000420138 TGIF1Q15583 401 aa18.9■□□□□ 0.62
GPC1-202ENST00000420138 THOC3Q96J01 351 aaKnown RBP18.9■□□□□ 0.62
GPC1-202ENST00000420138 TIMP4Q99727 224 aa18.9■□□□□ 0.62
GPC1-202ENST00000420138 CHCHD6Q9BRQ6 235 aa18.9■□□□□ 0.62
GPC1-202ENST00000420138 ADGRL4Q9HBW9 690 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms