RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 DBIP07108 87 aaKnown RBP6.16□□□□□ -1.42
HMGN1-205ENST00000419378 CD1EP15812 388 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 IL7RP16871 459 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 PGCP20142 388 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 RYKP34925 604 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 CRISP3P54108 245 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 CARD18P57730 90 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 KCNJ10P78508 379 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 MERTKQ12866 999 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 GNA13Q14344 377 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 RGNQ15493 299 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 ZNF239Q16600 458 aaKnown RBP6.16□□□□□ -1.42
HMGN1-205ENST00000419378 TMEM176BQ3YBM2 270 aaPredicted RBP6.16□□□□□ -1.42
HMGN1-205ENST00000419378 AGKQ53H12 422 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 LRIF1Q5T3J3 769 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 C3orf33Q6P1S2 294 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 PLEKHM3Q6ZWE6 761 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 MSRB3Q8IXL7 192 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 ARFGAP2Q8N6H7 521 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 ATP6V1C2Q8NEY4 427 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 OR6K3Q8NGY3 331 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 ZNF563Q8TA94 476 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 RNF128Q8TEB7 428 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 ABHD3Q8WU67 409 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 SLC38A5Q8WUX1 472 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 WDR60Q8WVS4 1066 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 TMEM234Q8WY98 164 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 CNOT9Q92600 299 aaKnown RBP6.16□□□□□ -1.42
HMGN1-205ENST00000419378 OSTF1Q92882 214 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 CPNE4Q96A23 557 aaPredicted RBP6.16□□□□□ -1.42
HMGN1-205ENST00000419378 TMEM19Q96HH6 336 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 GMPPAQ96IJ6 420 aaPredicted RBP6.16□□□□□ -1.42
HMGN1-205ENST00000419378 WWC2-AS2Q96NR7 200 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 SIKE1Q9BRV8 207 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 BDH2Q9BUT1 245 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 OPN3Q9H1Y3 402 aaPredicted RBP6.16□□□□□ -1.42
HMGN1-205ENST00000419378 RAD21L1Q9H4I0 556 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 RABEP2Q9H5N1 569 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 ZNF385DQ9H6B1 395 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 MTHFD2LQ9H903 347 aaPredicted RBP6.16□□□□□ -1.42
HMGN1-205ENST00000419378 GPR35Q9HC97 309 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 TIGARQ9NQ88 270 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 THUMPD1Q9NXG2 353 aaKnown RBP6.16□□□□□ -1.42
HMGN1-205ENST00000419378 CALML5Q9NZT1 146 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 CLEC4AQ9UMR7 237 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 PROCRQ9UNN8 238 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 TESMINQ9Y4I5 508 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 AKAP6Q13023 2319 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 UQCRHLA0A096LP55 91 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 TRBV5-3A0A0A0MS03 114 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 IGHV3-15A0A0B4J1V0 119 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 A0A1W2PP18 115 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 TMEM247A6NEH6 219 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 A6NNC1 897 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 CLIC1O00299 241 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 CTAG2O75638 210 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 PABPC4LP0CB38 370 aaKnown RBP6.15□□□□□ -1.42
HMGN1-205ENST00000419378 UQCRBP14927 111 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 NCF2P19878 526 aaPredicted RBP6.15□□□□□ -1.42
HMGN1-205ENST00000419378 AGTR1P30556 359 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 CCKARP32238 428 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 CD79BP40259 229 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 PTTG1IPP53801 180 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 CTBP2P56545 445 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 NHLH2Q02577 135 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 EPS8Q12929 822 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 FADDQ13158 208 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 HABP2Q14520 560 aaPredicted RBP6.15□□□□□ -1.42
HMGN1-205ENST00000419378 LIN52Q52LA3 116 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 SYT14P1Q58G82 188 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 PAGE3Q5JUK9 113 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 MRPL2Q5T653 305 aaKnown RBP6.15□□□□□ -1.42
HMGN1-205ENST00000419378 ZNF474Q6S9Z5 364 aaPredicted RBP6.15□□□□□ -1.42
HMGN1-205ENST00000419378 ZNF836Q6ZNA1 936 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 GRINAQ7Z429 371 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 VRK2Q86Y07 508 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 PEX5LQ8IYB4 626 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 C10orf111Q8N326 155 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 OR52P1PQ8NH57 321 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 LINC01560Q8TB33 94 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 SLC25A43Q8WUT9 341 aaPredicted RBP6.15□□□□□ -1.42
HMGN1-205ENST00000419378 ROBO4Q8WZ75 1007 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 MAL2Q969L2 176 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 GPATCH1Q9BRR8 931 aaKnown RBP6.15□□□□□ -1.42
HMGN1-205ENST00000419378 CCDC106Q9BWC9 280 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 TMEM120AQ9BXJ8 343 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 IKZF5Q9H5V7 419 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 A4GALTQ9NPC4 353 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 CTPS2Q9NRF8 586 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 SERINC1Q9NRX5 453 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 GLRX2Q9NS18 164 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 ACER3Q9NUN7 267 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 VAPAQ9P0L0 249 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 KLHL13Q9P2N7 655 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 CHRNA9Q9UGM1 479 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 ZNF443Q9Y2A4 671 aaPredicted RBP6.15□□□□□ -1.42
HMGN1-205ENST00000419378 GMEB1Q9Y692 573 aa6.15□□□□□ -1.42
HMGN1-205ENST00000419378 ABCA4P78363 2273 aa6.15□□□□□ -1.43
HMGN1-205ENST00000419378 A0A0G2JPF8 293 aa6.14□□□□□ -1.43
HMGN1-205ENST00000419378 CFAP73A6NFT4 308 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms