RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 SULT2B1O00204 365 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 CLN5O75503 358 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 IGHV2-5P01817 119 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 AKAIN1P0CW23 69 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 EDNRAP25101 427 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 ITPKBP27987 946 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 SNRPD1P62314 119 aaKnown RBP7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 CRMP1Q14194 572 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 INPP5JQ15735 1006 aaPredicted RBP7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 RPL13AP3Q6NVV1 102 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 IL34Q6ZMJ4 242 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 THSD4Q6ZMP0 1018 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 TMEM200AQ86VY9 491 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 DCUN1D3Q8IWE4 304 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 ZNF561Q8N587 486 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 STOML3Q8TAV4 291 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 MRPL38Q96DV4 380 aaKnown RBP7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 NRIP2Q9BQI9 281 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 RHBGQ9H310 441 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 TMEM231Q9H6L2 316 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 RPH3AQ9Y2J0 694 aaPredicted RBP7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 OR2AT4A6NND4 320 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 KIAA0355O15063 1070 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 TXNL1O43396 289 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 XRCC3O43542 346 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 PAPLNO95428 1278 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 KLK3P07288 261 aaPredicted RBP7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 MUC1P15941 1255 aaPredicted RBP7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 RCC1P18754 421 aaPredicted RBP7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 MAKP20794 623 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 NCBP2P52298 156 aaKnown RBP eCLIP7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 TAS2R38P59533 333 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 AGERQ15109 404 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 TAS1R1Q7RTX1 841 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 NUDT13Q86X67 352 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 SFXN5Q8TD22 340 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 ING5Q8WYH8 240 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 GTF3AQ92664 365 aaKnown RBP7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 FBXO17Q96EF6 278 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 C16orf58Q96GQ5 468 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 SFXN1Q9H9B4 322 aa7.36□□□□□ -1.23
HMGXB4-202ENST00000418170 BNIP3LO60238 219 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 RCBTB2O95199 551 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 GYPBP06028 91 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 APEHP13798 732 aaKnown RBP7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 GTF2F2P13984 249 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 PBLDP30039 288 aaPredicted RBP7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 PTGER1P34995 402 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 TAF13Q15543 124 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 SGCAQ16586 387 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 GFOD2Q3B7J2 385 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 TEX30Q5JUR7 227 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 CLLU1OSQ5K130 101 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 ABHD13Q7L211 337 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 HSD11B1LQ7Z5J1 315 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 LSRQ86X29 649 aaPredicted RBP7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 DND1Q8IYX4 353 aaKnown RBP7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 CYB561A3Q8NBI2 242 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 OR5AP2Q8NGF4 316 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 RNF141Q8WVD5 230 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 HIST1H2BAQ96A08 127 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 RAD51AP1Q96B01 352 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 C14orf79Q96F83 325 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 PRSS27Q9BQR3 290 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 TREM2Q9NZC2 230 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 MAFFQ9ULX9 164 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 NUMA1Q14980 2115 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 SCN5AQ14524 2016 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 C17orf113A0A1B0GUU1 675 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 WASH3PC4AMC7 463 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 GREM1O60565 184 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 OR2T7P0C7T2 308 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 CTSAP10619 480 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 ZNF3P17036 446 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 SDHAP31040 664 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 EIF2S3P41091 472 aaKnown RBP7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 PJVKQ0ZLH3 352 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 LRRC37A5PQ49AS3 106 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 PRAMEF14Q5SWL7 426 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 LIPNQ5VXI9 398 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 ZNF425Q6IV72 752 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 Q6ZVL8 140 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 SDR9C7Q8NEX9 313 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 OR2T27Q8NH04 317 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 TCTEX1D2Q8WW35 142 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 ZDHHC12Q96GR4 267 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 ZC3H10Q96K80 434 aaKnown RBP7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 OR7D2Q96RA2 312 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 PFDN5Q99471 154 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 WDR77Q9BQA1 342 aaPredicted RBP7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 TMEM27Q9HBJ8 222 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 MRPS30Q9NP92 439 aaKnown RBP7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 MYOZ1Q9NP98 299 aaPredicted RBP7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 C20orf141Q9NUB4 165 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 CALML5Q9NZT1 146 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 NCDNQ9UBB6 729 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 GXYLT2A0PJZ3 443 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 ZNF705EA8MWA4 302 aaPredicted RBP7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 PRKRAO75569 313 aaKnown RBP7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 FARS2O95363 451 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 237.7 ms