RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 SLC34A1Q06495 639 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 TSPAN31Q12999 210 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 TOP3AQ13472 1001 aaPredicted RBP7.57□□□□□ -1.2
TRIM48-201ENST00000417545 ANKDD1AQ495B1 522 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 ZBED5Q49AG3 693 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 ALG10Q5BKT4 473 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 HMBOX1Q6NT76 420 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 C1orf94Q6P1W5 598 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 Q6ZPB1 254 aaPredicted RBP7.57□□□□□ -1.2
TRIM48-201ENST00000417545 TMPRSS11FQ6ZWK6 438 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 SLC46A3Q7Z3Q1 461 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 TMEM179BQ7Z7N9 219 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 LSRQ86X29 649 aaPredicted RBP7.57□□□□□ -1.2
TRIM48-201ENST00000417545 CCDC103Q8IW40 242 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 HS3ST5Q8IZT8 346 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 ADPRHL1Q8NDY3 354 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 ANKK1Q8NFD2 765 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 TEX47Q8TBZ9 253 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 MAGEE2Q8TD90 523 aaPredicted RBP7.57□□□□□ -1.2
TRIM48-201ENST00000417545 UCN2Q96RP3 112 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 FEVQ99581 238 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 RBM4BQ9BQ04 359 aaKnown RBP7.57□□□□□ -1.2
TRIM48-201ENST00000417545 IFT27Q9BW83 186 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 RBM4Q9BWF3 364 aaKnown RBP7.57□□□□□ -1.2
TRIM48-201ENST00000417545 OSBPL10Q9BXB5 764 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 POLDIP3Q9BY77 421 aaKnown RBP7.57□□□□□ -1.2
TRIM48-201ENST00000417545 UCK2Q9BZX2 261 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 RNPEPL1Q9HAU8 725 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 PAPOLBQ9NRJ5 636 aaKnown RBP7.57□□□□□ -1.2
TRIM48-201ENST00000417545 INIPQ9NRY2 104 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 GLRX2Q9NS18 164 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 COQ3Q9NZJ6 369 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 STX18Q9P2W9 335 aaKnown RBP7.57□□□□□ -1.2
TRIM48-201ENST00000417545 CLEC4AQ9UMR7 237 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 ZNF835Q9Y2P0 537 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 NOSIPQ9Y314 301 aaKnown RBP7.57□□□□□ -1.2
TRIM48-201ENST00000417545 NOX1Q9Y5S8 564 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 ZGRF1Q86YA3 2104 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 ZNF726A6NNF4 738 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 HSPB2A8KAH6 182 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 FTCDNL1E5RQL4 147 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 E9PLN8 166 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 PDLIM1O00151 329 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 CYTIPO60759 359 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 SOX14O95416 240 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 ATP6V1G2O95670 118 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 GASTP01350 101 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 F13BP05160 661 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 FUT4P22083 530 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 SLC6A6P31641 620 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 AQP2P41181 271 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 LIMS1P48059 325 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 DAP3P51398 398 aaKnown RBP7.56□□□□□ -1.2
TRIM48-201ENST00000417545 AGFG1P52594 562 aaKnown RBP7.56□□□□□ -1.2
TRIM48-201ENST00000417545 SMSP52788 366 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 CTXN1P60606 82 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 RPL18Q07020 188 aaKnown RBP7.56□□□□□ -1.2
TRIM48-201ENST00000417545 PMPCAQ10713 525 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 COX10Q12887 443 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 HSPB2Q16082 182 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 LRRC36Q1X8D7 754 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 EMC4Q5J8M3 183 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 ABLIM2Q6H8Q1 611 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 SMARCD3Q6STE5 483 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 PLXDC2Q6UX71 529 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 CASP12Q6UXS9 341 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 ZBTB49Q6ZSB9 765 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 ZER1Q7Z7L7 766 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 GALNT5Q7Z7M9 940 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 IGFN1Q86VF2 1251 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 ZNF100Q8IYN0 542 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 GCNT2Q8N0V5 402 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 KDM8Q8N371 416 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 LRRC17Q8N6Y2 441 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 RNF128Q8TEB7 428 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 ABHD3Q8WU67 409 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 RND1Q92730 232 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 INTS12Q96CB8 462 aaKnown RBP7.56□□□□□ -1.2
TRIM48-201ENST00000417545 GMPPAQ96IJ6 420 aaPredicted RBP7.56□□□□□ -1.2
TRIM48-201ENST00000417545 PLEKHA8Q96JA3 519 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 ZFP3Q96NJ6 502 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 OXGR1Q96P68 337 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 VKORC1Q9BQB6 163 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 FUZQ9BT04 418 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 SF3B5Q9BWJ5 86 aaKnown RBP7.56□□□□□ -1.2
TRIM48-201ENST00000417545 DGCR6LQ9BY27 220 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 PRRG3Q9BZD7 231 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 GABARAPL1Q9H0R8 117 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 OR52D1Q9H346 318 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 RIBC2Q9H4K1 309 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 CLCF1Q9UBD9 225 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 SEC14L4Q9UDX3 406 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 CDH10Q9Y6N8 788 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 MED12Q93074 2177 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 SHANK1Q9Y566 2161 aa7.56□□□□□ -1.2
TRIM48-201ENST00000417545 NBEAQ8NFP9 2946 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 MBD3L4A6NDZ8 208 aaPredicted RBP7.55□□□□□ -1.2
TRIM48-201ENST00000417545 MBD3L3A6NE82 208 aaPredicted RBP7.55□□□□□ -1.2
TRIM48-201ENST00000417545 MBD3L5A6NJ08 208 aaPredicted RBP7.55□□□□□ -1.2
TRIM48-201ENST00000417545 PLPP3O14495 311 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms