RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 PDZK1Q5T2W1 519 aa11.32□□□□□ -0.6
LINC00339-202ENST00000416769 AGAP6Q5VW22 663 aa11.32□□□□□ -0.6
LINC00339-202ENST00000416769 GLYATQ6IB77 296 aa11.32□□□□□ -0.6
LINC00339-202ENST00000416769 SLC22A25Q6T423 547 aa11.32□□□□□ -0.6
LINC00339-202ENST00000416769 CLEC2AQ6UVW9 174 aa11.32□□□□□ -0.6
LINC00339-202ENST00000416769 PATL1Q86TB9 770 aaKnown RBP11.32□□□□□ -0.6
LINC00339-202ENST00000416769 ZNF100Q8IYN0 542 aa11.32□□□□□ -0.6
LINC00339-202ENST00000416769 ZNF527Q8NB42 609 aa11.32□□□□□ -0.6
LINC00339-202ENST00000416769 OR52E4Q8NGH9 312 aa11.32□□□□□ -0.6
LINC00339-202ENST00000416769 C10orf105Q8TEF2 133 aa11.32□□□□□ -0.6
LINC00339-202ENST00000416769 ZG16BQ96DA0 208 aa11.32□□□□□ -0.6
LINC00339-202ENST00000416769 ZNF607Q96SK3 696 aa11.32□□□□□ -0.6
LINC00339-202ENST00000416769 BEX2Q9BXY8 128 aa11.32□□□□□ -0.6
LINC00339-202ENST00000416769 GRIP2Q9C0E4 1043 aa11.32□□□□□ -0.6
LINC00339-202ENST00000416769 MUC13Q9H3R2 512 aa11.32□□□□□ -0.6
LINC00339-202ENST00000416769 GORASP2Q9H8Y8 452 aa11.32□□□□□ -0.6
LINC00339-202ENST00000416769 CHODLQ9H9P2 273 aa11.32□□□□□ -0.6
LINC00339-202ENST00000416769 GP6Q9HCN6 339 aa11.32□□□□□ -0.6
LINC00339-202ENST00000416769 CBLN4Q9NTU7 201 aa11.32□□□□□ -0.6
LINC00339-202ENST00000416769 CDC42EP3Q9UKI2 254 aa11.32□□□□□ -0.6
LINC00339-202ENST00000416769 POU2F3Q9UKI9 436 aa11.32□□□□□ -0.6
LINC00339-202ENST00000416769 IFT52Q9Y366 437 aa11.32□□□□□ -0.6
LINC00339-202ENST00000416769 DSPPQ9NZW4 1301 aa11.32□□□□□ -0.6
LINC00339-202ENST00000416769 ELOA3DA6NLF2 546 aaPredicted RBP11.31□□□□□ -0.6
LINC00339-202ENST00000416769 GJE1A6NN92 205 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 ZNF716A6NP11 495 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 M0QX08 132 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 CXCR6O00574 342 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 KIAA0513O60268 411 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 GMNNO75496 209 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 SERPINB7O75635 380 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 UGT2B17O75795 530 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 TCN1P20061 433 aaPredicted RBP11.31□□□□□ -0.6
LINC00339-202ENST00000416769 KDELR2P33947 212 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 DIO1P49895 249 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 SESN3P58005 492 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 PLAURQ03405 335 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 SKP2Q13309 424 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 NRF1Q16656 503 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 ELOA3BQ3SY89 546 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 SLC25A53Q5H9E4 307 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 ABLIM2Q6H8Q1 611 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 KRT73Q86Y46 540 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 CCDC103Q8IW40 242 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 SLC43A2Q8N370 569 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 MUC15Q8N387 334 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 WDR31Q8NA23 367 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 FAM156AQ8NDB6 213 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 ELOA3Q8NG57 546 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 OR5W2Q8NH69 310 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 MUCL1Q96DR8 90 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 CLPTM1LQ96KA5 538 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 ARL5BQ96KC2 179 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 ADAD1Q96M93 576 aaKnown RBP11.31□□□□□ -0.6
LINC00339-202ENST00000416769 DHRS9Q9BPW9 319 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 SOX7Q9BT81 388 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 SPATA5L1Q9BVQ7 753 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 OR11A1Q9GZK7 315 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 EGFL7Q9UHF1 273 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 ZNF232Q9UNY5 417 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 DTNAQ9Y4J8 743 aa11.31□□□□□ -0.6
LINC00339-202ENST00000416769 AGAP5A6NIR3 686 aa11.3□□□□□ -0.6
LINC00339-202ENST00000416769 ZNF724A8MTY0 619 aa11.3□□□□□ -0.6
LINC00339-202ENST00000416769 ATP6V1G2-DDX39BF2Z307 99 aa11.3□□□□□ -0.6
LINC00339-202ENST00000416769 ETV2O00321 342 aaPredicted RBP11.3□□□□□ -0.6
LINC00339-202ENST00000416769 PDE5AO76074 875 aa11.3□□□□□ -0.6
LINC00339-202ENST00000416769 MFN2O95140 757 aa11.3□□□□□ -0.6
LINC00339-202ENST00000416769 IFNA14P01570 189 aa11.3□□□□□ -0.6
LINC00339-202ENST00000416769 DBIP07108 87 aaKnown RBP11.3□□□□□ -0.6
LINC00339-202ENST00000416769 ITGA5P08648 1049 aa11.3□□□□□ -0.6
LINC00339-202ENST00000416769 UBL4AP11441 157 aa11.3□□□□□ -0.6
LINC00339-202ENST00000416769 RPS4Y1P22090 263 aaKnown RBP11.3□□□□□ -0.6
LINC00339-202ENST00000416769 MSX2P35548 267 aaPredicted RBP11.3□□□□□ -0.6
LINC00339-202ENST00000416769 FABP6P51161 128 aa11.3□□□□□ -0.6
LINC00339-202ENST00000416769 SUMO3P55854 103 aaPredicted RBP11.3□□□□□ -0.6
LINC00339-202ENST00000416769 MS4A2Q01362 244 aa11.3□□□□□ -0.6
LINC00339-202ENST00000416769 MAPK14Q16539 360 aa11.3□□□□□ -0.6
LINC00339-202ENST00000416769 ZSWIM7Q19AV6 140 aa11.3□□□□□ -0.6
LINC00339-202ENST00000416769 RPS26P11Q5JNZ5 115 aaPredicted RBP11.3□□□□□ -0.6
LINC00339-202ENST00000416769 GALNT5Q7Z7M9 940 aa11.3□□□□□ -0.6
LINC00339-202ENST00000416769 PEX5LQ8IYB4 626 aa11.3□□□□□ -0.6
LINC00339-202ENST00000416769 UBE2J2Q8N2K1 259 aa11.3□□□□□ -0.6
LINC00339-202ENST00000416769 BHLHE22Q8NFJ8 381 aaPredicted RBP11.3□□□□□ -0.6
LINC00339-202ENST00000416769 OR52P1PQ8NH57 321 aa11.3□□□□□ -0.6
LINC00339-202ENST00000416769 RASSF5Q8WWW0 418 aa11.3□□□□□ -0.6
LINC00339-202ENST00000416769 FAM168AQ92567 244 aa11.3□□□□□ -0.6
LINC00339-202ENST00000416769 C3orf49Q96BT1 292 aa11.3□□□□□ -0.6
LINC00339-202ENST00000416769 ASB9Q96DX5 294 aa11.3□□□□□ -0.6
LINC00339-202ENST00000416769 C1orf159Q96HA4 380 aa11.3□□□□□ -0.6
LINC00339-202ENST00000416769 PCDHAC1Q9H158 963 aa11.3□□□□□ -0.6
LINC00339-202ENST00000416769 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.3□□□□□ -0.6
LINC00339-202ENST00000416769 FAIMQ9NVQ4 179 aa11.3□□□□□ -0.6
LINC00339-202ENST00000416769 ACTR3BQ9P1U1 418 aa11.3□□□□□ -0.6
LINC00339-202ENST00000416769 MAGEL2Q9UJ55 1249 aa11.3□□□□□ -0.6
LINC00339-202ENST00000416769 SERINC4A6NH21 518 aa11.29□□□□□ -0.6
LINC00339-202ENST00000416769 CLDN24A6NM45 220 aa11.29□□□□□ -0.6
LINC00339-202ENST00000416769 ZNF264O43296 627 aa11.29□□□□□ -0.6
LINC00339-202ENST00000416769 STAMBPO95630 424 aa11.29□□□□□ -0.6
LINC00339-202ENST00000416769 UBTFL6P0CB48 400 aaPredicted RBP11.29□□□□□ -0.6
LINC00339-202ENST00000416769 IL7RP16871 459 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms