RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 PNMTP11086 282 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 APEHP13798 732 aaKnown RBP12.56□□□□□ -0.4
PAF1-202ENST00000416728 ZNF43P17038 809 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 RPS5P46782 204 aaKnown RBP12.56□□□□□ -0.4
PAF1-202ENST00000416728 CLDN17P56750 224 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 TUBA1BP68363 451 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 TUBA4AP68366 448 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 ROR2Q01974 943 aaKnown RBP12.56□□□□□ -0.4
PAF1-202ENST00000416728 ADIPOQQ15848 244 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 C3orf36Q3SXR2 165 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 FAM166AQ6J272 317 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 VHLLQ6RSH7 139 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 TUBA1AQ71U36 451 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 LINGO2Q7L985 606 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 ANKS4BQ8N8V4 417 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 VPS33AQ96AX1 596 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 CHODLQ9H9P2 273 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 CRNNQ9UBG3 495 aaPredicted RBP12.56□□□□□ -0.4
PAF1-202ENST00000416728 RCE1Q9Y256 329 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 LOC100289279A0A1B0GTE1 492 aa12.55□□□□□ -0.4
PAF1-202ENST00000416728 UBDO15205 165 aa12.55□□□□□ -0.4
PAF1-202ENST00000416728 IGLV1-44P01699 117 aa12.55□□□□□ -0.4
PAF1-202ENST00000416728 HOXB1P14653 301 aaPredicted RBP12.55□□□□□ -0.4
PAF1-202ENST00000416728 SRD5A1P18405 259 aa12.55□□□□□ -0.4
PAF1-202ENST00000416728 IGFBP5P24593 272 aa12.55□□□□□ -0.4
PAF1-202ENST00000416728 POLR2JP52435 117 aaKnown RBP12.55□□□□□ -0.4
PAF1-202ENST00000416728 HOXC5Q00444 222 aa12.55□□□□□ -0.4
PAF1-202ENST00000416728 EFNB3Q15768 340 aa12.55□□□□□ -0.4
PAF1-202ENST00000416728 IQCCQ4KMZ1 466 aa12.55□□□□□ -0.4
PAF1-202ENST00000416728 SLC9B1Q4ZJI4 515 aa12.55□□□□□ -0.4
PAF1-202ENST00000416728 KDM8Q8N371 416 aa12.55□□□□□ -0.4
PAF1-202ENST00000416728 ARIH2OSQ8N7S6 290 aa12.55□□□□□ -0.4
PAF1-202ENST00000416728 FAM169BQ8N8A8 192 aa12.55□□□□□ -0.4
PAF1-202ENST00000416728 OR4F15Q8NGB8 312 aa12.55□□□□□ -0.4
PAF1-202ENST00000416728 OR9I1Q8NGQ6 314 aa12.55□□□□□ -0.4
PAF1-202ENST00000416728 SLC35B4Q969S0 331 aa12.55□□□□□ -0.4
PAF1-202ENST00000416728 FOXN4Q96NZ1 517 aa12.55□□□□□ -0.4
PAF1-202ENST00000416728 PTDSS2Q9BVG9 487 aa12.55□□□□□ -0.4
PAF1-202ENST00000416728 NELFAQ9H3P2 528 aa12.55□□□□□ -0.4
PAF1-202ENST00000416728 BCL2L10Q9HD36 194 aa12.55□□□□□ -0.4
PAF1-202ENST00000416728 RPS6KB2Q9UBS0 482 aa12.55□□□□□ -0.4
PAF1-202ENST00000416728 RAB21Q9UL25 225 aa12.55□□□□□ -0.4
PAF1-202ENST00000416728 MXRA5Q9NR99 2828 aa12.54□□□□□ -0.4
PAF1-202ENST00000416728 CUBNO60494 3623 aa12.54□□□□□ -0.4
PAF1-202ENST00000416728 IGHV4-61A0A0C4DH41 118 aa12.54□□□□□ -0.4
PAF1-202ENST00000416728 SLC43A1O75387 559 aa12.54□□□□□ -0.4
PAF1-202ENST00000416728 IGKV3-15P01624 115 aa12.54□□□□□ -0.4
PAF1-202ENST00000416728 NUDT7P0C024 238 aa12.54□□□□□ -0.4
PAF1-202ENST00000416728 CALCRP30988 508 aa12.54□□□□□ -0.4
PAF1-202ENST00000416728 EGR4Q05215 589 aa12.54□□□□□ -0.4
PAF1-202ENST00000416728 FADDQ13158 208 aa12.54□□□□□ -0.4
PAF1-202ENST00000416728 C1DQ13901 141 aaKnown RBP12.54□□□□□ -0.4
PAF1-202ENST00000416728 RGNQ15493 299 aa12.54□□□□□ -0.4
PAF1-202ENST00000416728 MIER2Q8N344 545 aa12.54□□□□□ -0.4
PAF1-202ENST00000416728 GPR137CQ8N3F9 429 aa12.54□□□□□ -0.4
PAF1-202ENST00000416728 ZNF540Q8NDQ6 660 aa12.54□□□□□ -0.4
PAF1-202ENST00000416728 ANKK1Q8NFD2 765 aa12.54□□□□□ -0.4
PAF1-202ENST00000416728 BBS10Q8TAM1 723 aa12.54□□□□□ -0.4
PAF1-202ENST00000416728 MAL2Q969L2 176 aa12.54□□□□□ -0.4
PAF1-202ENST00000416728 MSI2Q96DH6 328 aaKnown RBP12.54□□□□□ -0.4
PAF1-202ENST00000416728 KTI12Q96EK9 354 aaPredicted RBP12.54□□□□□ -0.4
PAF1-202ENST00000416728 OXGR1Q96P68 337 aa12.54□□□□□ -0.4
PAF1-202ENST00000416728 OR52B2Q96RD2 323 aa12.54□□□□□ -0.4
PAF1-202ENST00000416728 PRR14Q9BWN1 585 aa12.54□□□□□ -0.4
PAF1-202ENST00000416728 RAB1BQ9H0U4 201 aa12.54□□□□□ -0.4
PAF1-202ENST00000416728 PLK3Q9H4B4 646 aa12.54□□□□□ -0.4
PAF1-202ENST00000416728 RAD21L1Q9H4I0 556 aa12.54□□□□□ -0.4
PAF1-202ENST00000416728 SEC61A2Q9H9S3 476 aa12.54□□□□□ -0.4
PAF1-202ENST00000416728 A4GALTQ9NPC4 353 aa12.54□□□□□ -0.4
PAF1-202ENST00000416728 NKIRAS1Q9NYS0 192 aa12.54□□□□□ -0.4
PAF1-202ENST00000416728 SEC14L4Q9UDX3 406 aa12.54□□□□□ -0.4
PAF1-202ENST00000416728 FBXO9Q9UK97 447 aaPredicted RBP12.54□□□□□ -0.4
PAF1-202ENST00000416728 PCDHB14Q9Y5E9 798 aa12.54□□□□□ -0.4
PAF1-202ENST00000416728 SLC35F4A4IF30 521 aa12.53□□□□□ -0.4
PAF1-202ENST00000416728 VSTM5A8MXK1 200 aa12.53□□□□□ -0.4
PAF1-202ENST00000416728 C5orf58C9J3I9 102 aa12.53□□□□□ -0.4
PAF1-202ENST00000416728 RPL36A-HNRNPH2H7BZ11 118 aa12.53□□□□□ -0.4
PAF1-202ENST00000416728 CLIC1O00299 241 aa12.53□□□□□ -0.4
PAF1-202ENST00000416728 AIM2O14862 343 aa12.53□□□□□ -0.4
PAF1-202ENST00000416728 OR2T1O43869 369 aa12.53□□□□□ -0.4
PAF1-202ENST00000416728 ZNF432O94892 652 aa12.53□□□□□ -0.4
PAF1-202ENST00000416728 ERCC1P07992 297 aaPredicted RBP12.53□□□□□ -0.4
PAF1-202ENST00000416728 CBR1P16152 277 aa12.53□□□□□ -0.4
PAF1-202ENST00000416728 HNF1AP20823 631 aa12.53□□□□□ -0.4
PAF1-202ENST00000416728 THBS2P35442 1172 aa12.53□□□□□ -0.4
PAF1-202ENST00000416728 PPOXP50336 477 aa12.53□□□□□ -0.4
PAF1-202ENST00000416728 IDH3GP51553 393 aaPredicted RBP12.53□□□□□ -0.4
PAF1-202ENST00000416728 ARF1P84077 181 aaKnown RBP12.53□□□□□ -0.4
PAF1-202ENST00000416728 FAM120AOSQ5T036 256 aa12.53□□□□□ -0.4
PAF1-202ENST00000416728 FAM69AQ5T7M9 428 aa12.53□□□□□ -0.4
PAF1-202ENST00000416728 C5orf46Q6UWT4 87 aa12.53□□□□□ -0.4
PAF1-202ENST00000416728 C6orf89Q6UWU4 347 aa12.53□□□□□ -0.4
PAF1-202ENST00000416728 MAVSQ7Z434 540 aa12.53□□□□□ -0.4
PAF1-202ENST00000416728 NUP37Q8NFH4 326 aa12.53□□□□□ -0.4
PAF1-202ENST00000416728 GTF2H4Q92759 462 aa12.53□□□□□ -0.4
PAF1-202ENST00000416728 BPESC1Q9GZL8 116 aa12.53□□□□□ -0.4
PAF1-202ENST00000416728 ZNF442Q9H7R0 627 aa12.53□□□□□ -0.4
PAF1-202ENST00000416728 C12orf10Q9HB07 376 aa12.53□□□□□ -0.4
PAF1-202ENST00000416728 B3GAT1Q9P2W7 334 aa12.53□□□□□ -0.4
PAF1-202ENST00000416728 HEATR1Q9H583 2144 aaKnown RBP12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms