RNA–Protein interactions for RNA: ENST00000416098.1

NXF4-202, Transcript of nuclear RNA export factor 4 pseudogene, humanhuman

BASIC

Gene NXF4, Length 1,465 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF4-202ENST00000416098 IKZF3Q9UKT9 509 aa4.88□□□□□ -1.63
NXF4-202ENST00000416098 SLC22A14Q9Y267 594 aa4.88□□□□□ -1.63
NXF4-202ENST00000416098 MRPS18BQ9Y676 258 aaKnown RBP4.88□□□□□ -1.63
NXF4-202ENST00000416098 IGLV3-12A0A075B6K2 115 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 A0A0U1RQV5 110 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 A0A0U1RRA0 63 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 EXOC1LA0A1B0GW35 172 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 PRAF2O60831 178 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 GMNNO75496 209 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 STK16O75716 305 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 KLF7O75840 302 aaPredicted RBP4.87□□□□□ -1.63
NXF4-202ENST00000416098 KLHL2O95198 593 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 NSA2O95478 260 aaKnown RBP4.87□□□□□ -1.63
NXF4-202ENST00000416098 C2P06681 752 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 FGF2P09038 288 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 PRKAR1AP10644 381 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 CDH1P12830 882 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 DPP4P27487 766 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 AHRP35869 848 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 PIGAP37287 484 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 MAGEA12P43365 314 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 P2RX3P56373 397 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 SKP1P63208 163 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 MAD2L1Q13257 205 aaPredicted RBP4.87□□□□□ -1.63
NXF4-202ENST00000416098 CTU2Q2VPK5 515 aaKnown RBP4.87□□□□□ -1.63
NXF4-202ENST00000416098 LINC00303Q3SY05 128 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 C1orf189Q5VU69 101 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 LCN10Q6JVE6 187 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 FAM159AQ6UWV7 190 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 THOC6Q86W42 341 aaKnown RBP4.87□□□□□ -1.63
NXF4-202ENST00000416098 APLFQ8IW19 511 aaPredicted RBP4.87□□□□□ -1.63
NXF4-202ENST00000416098 STHQ8IWL8 128 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 UBQLNLQ8IYU4 475 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 GPR137CQ8N3F9 429 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 MFSD9Q8NBP5 474 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 TTLQ8NG68 377 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 OR9K2Q8NGE7 335 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 OR2AJ1Q8NGZ0 328 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 TRMT10AQ8TBZ6 339 aaKnown RBP4.87□□□□□ -1.63
NXF4-202ENST00000416098 TMEM163Q8TC26 289 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 CHPT1Q8WUD6 406 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 GGHQ92820 318 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 NEIL2Q969S2 332 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 NCLNQ969V3 563 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 EFHD2Q96C19 240 aaPredicted RBP4.87□□□□□ -1.63
NXF4-202ENST00000416098 MTBPQ96DY7 904 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 TM4SF19Q96DZ7 209 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 ARL5BQ96KC2 179 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 C10orf90Q96M02 699 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 OR4K3Q96R72 315 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 ATOH8Q96SQ7 321 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 AIF1LQ9BQI0 150 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 DRC3Q9H069 523 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 KCNN2Q9H2S1 579 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 ALG9Q9H6U8 611 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 ACSS1Q9NUB1 689 aaPredicted RBP4.87□□□□□ -1.63
NXF4-202ENST00000416098 KLHL28Q9NXS3 571 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 WWOXQ9NZC7 414 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 NUDT4Q9NZJ9 180 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 CD274Q9NZQ7 290 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 COPS7AQ9UBW8 275 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 ZNF282Q9UDV7 671 aaPredicted RBP4.87□□□□□ -1.63
NXF4-202ENST00000416098 TMCO1Q9UM00 188 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 SLC22A7Q9Y694 548 aa4.87□□□□□ -1.63
NXF4-202ENST00000416098 SMG1Q96Q15 3661 aaKnown RBP4.86□□□□□ -1.63
NXF4-202ENST00000416098 BSNQ9UPA5 3926 aa4.86□□□□□ -1.63
NXF4-202ENST00000416098 TNRC6AQ8NDV7 1962 aaKnown RBP4.86□□□□□ -1.63
NXF4-202ENST00000416098 IQANK1A0A1B0GTG1 560 aa4.86□□□□□ -1.63
NXF4-202ENST00000416098 VSTM2BA6NLU5 285 aa4.86□□□□□ -1.63
NXF4-202ENST00000416098 PLPP2O43688 288 aa4.86□□□□□ -1.63
NXF4-202ENST00000416098 DNAJB6O75190 326 aa4.86□□□□□ -1.63
NXF4-202ENST00000416098 S100A6P06703 90 aa4.86□□□□□ -1.63
NXF4-202ENST00000416098 SNRPAP09012 282 aaKnown RBP4.86□□□□□ -1.63
NXF4-202ENST00000416098 RBP1P09455 135 aa4.86□□□□□ -1.63
NXF4-202ENST00000416098 PRF1P14222 555 aa4.86□□□□□ -1.63
NXF4-202ENST00000416098 S1PR1P21453 382 aa4.86□□□□□ -1.63
NXF4-202ENST00000416098 GNLYP22749 145 aa4.86□□□□□ -1.63
NXF4-202ENST00000416098 CPN2P22792 545 aa4.86□□□□□ -1.63
NXF4-202ENST00000416098 MMP11P24347 488 aa4.86□□□□□ -1.63
NXF4-202ENST00000416098 CD1BP29016 333 aa4.86□□□□□ -1.63
NXF4-202ENST00000416098 CDKN1BP46527 198 aa4.86□□□□□ -1.63
NXF4-202ENST00000416098 SLC1A6P48664 564 aa4.86□□□□□ -1.63
NXF4-202ENST00000416098 STARP49675 285 aa4.86□□□□□ -1.63
NXF4-202ENST00000416098 RASSF2P50749 326 aa4.86□□□□□ -1.63
NXF4-202ENST00000416098 HMGA2P52926 109 aa4.86□□□□□ -1.63
NXF4-202ENST00000416098 MAPK12P53778 367 aa4.86□□□□□ -1.63
NXF4-202ENST00000416098 RPS18P62269 152 aaKnown RBP4.86□□□□□ -1.63
NXF4-202ENST00000416098 SSBP2P81877 361 aaPredicted RBP4.86□□□□□ -1.63
NXF4-202ENST00000416098 REEP5Q00765 189 aa4.86□□□□□ -1.63
NXF4-202ENST00000416098 MYBPC1Q00872 1141 aa4.86□□□□□ -1.63
NXF4-202ENST00000416098 ROR2Q01974 943 aaKnown RBP4.86□□□□□ -1.63
NXF4-202ENST00000416098 RGS1Q08116 209 aa4.86□□□□□ -1.63
NXF4-202ENST00000416098 DLG1Q12959 904 aa4.86□□□□□ -1.63
NXF4-202ENST00000416098 GAGE2BQ13066 116 aa4.86□□□□□ -1.63
NXF4-202ENST00000416098 GK2Q14410 553 aaPredicted RBP4.86□□□□□ -1.63
NXF4-202ENST00000416098 HERC3Q15034 1050 aa4.86□□□□□ -1.63
NXF4-202ENST00000416098 RBMS2Q15434 407 aaKnown RBP4.86□□□□□ -1.63
NXF4-202ENST00000416098 OR4D1Q15615 310 aa4.86□□□□□ -1.63
NXF4-202ENST00000416098 SRSF7Q16629 238 aaKnown RBP eCLIP4.86□□□□□ -1.63
NXF4-202ENST00000416098 HKDC1Q2TB90 917 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms