RNA–Protein interactions for RNA: ENST00000415495.5

CEACAM3-203, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

TSL 1 (best)

Gene CEACAM3, Length 1,640 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-203ENST00000415495 PLBD1Q6P4A8 553 aa19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 KCTD8Q6ZWB6 473 aa19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 H1FNTQ75WM6 255 aaPredicted RBP19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 CXXC5Q7LFL8 322 aaKnown RBP19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 PRSS48Q7RTY5 328 aa19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 SLC37A3Q8NCC5 494 aa19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 OR52E2Q8NGJ4 325 aa19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 OR14L1PQ8NHC6 308 aa19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 Q96M85 177 aa19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 C5orf34Q96MH7 638 aa19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 OR5B2Q96R09 309 aa19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 SMAD5Q99717 465 aaKnown RBP19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 ZNF703Q9H7S9 590 aaPredicted RBP19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 ALKBH4Q9NXW9 302 aa19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 TRAPPC4Q9Y296 219 aa19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 PCDHGB1Q9Y5G3 927 aa19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 CSAG2Q9Y5P2 127 aa19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 CELSR3Q9NYQ7 3312 aa19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 RIIAD1A6NNX1 92 aa19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 KLRC4-KLRK1H3BQV0 150 aa19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 MT-ND2P03891 347 aa19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 STSP08842 583 aa19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 ADORA3P0DMS8 318 aa19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 PCMT1P22061 227 aa19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 SFTPDP35247 375 aa19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 RFC3P40938 356 aa19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 EIF2S3P41091 472 aaKnown RBP19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 MEOX1P50221 254 aa19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 ST3GAL4Q11206 333 aa19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 ZNF766Q5HY98 468 aa19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 WIPI1Q5MNZ9 446 aaPredicted RBP19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 XAF1Q6GPH4 301 aa19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 SPACA3Q8IXA5 215 aa19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 ZFP62Q8NB50 900 aaPredicted RBP19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 NPEPL1Q8NDH3 523 aa19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 OR4K13Q8NH42 304 aa19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 MYDGFQ969H8 173 aa19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 TTTY12Q9BZ98 90 aa19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 MED20Q9H944 212 aa19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 KLHL21Q9UJP4 597 aa19.25■□□□□ 0.67
CEACAM3-203ENST00000415495 FREM3P0C091 2139 aa19.24■□□□□ 0.67
CEACAM3-203ENST00000415495 TRAPPC6AO75865 159 aa19.24■□□□□ 0.67
CEACAM3-203ENST00000415495 IFNGP01579 166 aa19.24■□□□□ 0.67
CEACAM3-203ENST00000415495 HPNP05981 417 aa19.24■□□□□ 0.67
CEACAM3-203ENST00000415495 JUNBP17275 347 aaPredicted RBP19.24■□□□□ 0.67
CEACAM3-203ENST00000415495 C21orf33P30042 268 aaPredicted RBP19.24■□□□□ 0.67
CEACAM3-203ENST00000415495 P2RY4P51582 365 aa19.24■□□□□ 0.67
CEACAM3-203ENST00000415495 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.24■□□□□ 0.67
CEACAM3-203ENST00000415495 TMPPEQ6ZT21 453 aa19.24■□□□□ 0.67
CEACAM3-203ENST00000415495 CYB561A3Q8NBI2 242 aa19.24■□□□□ 0.67
CEACAM3-203ENST00000415495 MIB2Q96AX9 1013 aa19.24■□□□□ 0.67
CEACAM3-203ENST00000415495 RASD2Q96D21 266 aa19.24■□□□□ 0.67
CEACAM3-203ENST00000415495 TSPAN32Q96QS1 320 aa19.24■□□□□ 0.67
CEACAM3-203ENST00000415495 NDEL1Q9GZM8 345 aa19.24■□□□□ 0.67
CEACAM3-203ENST00000415495 CHST11Q9NPF2 352 aa19.24■□□□□ 0.67
CEACAM3-203ENST00000415495 FANCFQ9NPI8 374 aa19.24■□□□□ 0.67
CEACAM3-203ENST00000415495 INIPQ9NRY2 104 aa19.24■□□□□ 0.67
CEACAM3-203ENST00000415495 ZNF346Q9UL40 294 aaKnown RBP19.24■□□□□ 0.67
CEACAM3-203ENST00000415495 MED12Q93074 2177 aa19.24■□□□□ 0.67
CEACAM3-203ENST00000415495 TEX13CA0A0J9YWL9 993 aa19.23■□□□□ 0.67
CEACAM3-203ENST00000415495 PRR23D1E9PI22 279 aaPredicted RBP19.23■□□□□ 0.67
CEACAM3-203ENST00000415495 C11orf98E9PRG8 122 aa19.23■□□□□ 0.67
CEACAM3-203ENST00000415495 AKR7A3O95154 331 aa19.23■□□□□ 0.67
CEACAM3-203ENST00000415495 PRR23D2P0DMB1 279 aaPredicted RBP19.23■□□□□ 0.67
CEACAM3-203ENST00000415495 ZNF3P17036 446 aa19.23■□□□□ 0.67
CEACAM3-203ENST00000415495 HTR1FP30939 366 aa19.23■□□□□ 0.67
CEACAM3-203ENST00000415495 SDHAP31040 664 aa19.23■□□□□ 0.67
CEACAM3-203ENST00000415495 CDKN2AP42771 156 aaKnown RBP19.23■□□□□ 0.67
CEACAM3-203ENST00000415495 GFRA1P56159 465 aa19.23■□□□□ 0.67
CEACAM3-203ENST00000415495 EMX1Q04741 257 aaPredicted RBP19.23■□□□□ 0.67
CEACAM3-203ENST00000415495 ZNF239Q16600 458 aaKnown RBP19.23■□□□□ 0.67
CEACAM3-203ENST00000415495 EMC4Q5J8M3 183 aa19.23■□□□□ 0.67
CEACAM3-203ENST00000415495 GPR139Q6DWJ6 353 aa19.23■□□□□ 0.67
CEACAM3-203ENST00000415495 NHLRC1Q6VVB1 395 aa19.23■□□□□ 0.67
CEACAM3-203ENST00000415495 CCDC81Q6ZN84 652 aa19.23■□□□□ 0.67
CEACAM3-203ENST00000415495 TMEM251Q8N6I4 163 aa19.23■□□□□ 0.67
CEACAM3-203ENST00000415495 DTNBP1Q96EV8 351 aa19.23■□□□□ 0.67
CEACAM3-203ENST00000415495 CCDC90BQ9GZT6 254 aa19.23■□□□□ 0.67
CEACAM3-203ENST00000415495 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.23■□□□□ 0.67
CEACAM3-203ENST00000415495 B3GALT5Q9Y2C3 310 aa19.23■□□□□ 0.67
CEACAM3-203ENST00000415495 SNX5Q9Y5X3 404 aa19.23■□□□□ 0.67
CEACAM3-203ENST00000415495 RNF13O43567 381 aa19.22■□□□□ 0.67
CEACAM3-203ENST00000415495 OR6A2O95222 327 aa19.22■□□□□ 0.67
CEACAM3-203ENST00000415495 PMS2P2O95744 297 aa19.22■□□□□ 0.67
CEACAM3-203ENST00000415495 SLC2A5P22732 501 aa19.22■□□□□ 0.67
CEACAM3-203ENST00000415495 DIO1P49895 249 aa19.22■□□□□ 0.67
CEACAM3-203ENST00000415495 CDH11P55287 796 aa19.22■□□□□ 0.67
CEACAM3-203ENST00000415495 OR2B6P58173 313 aa19.22■□□□□ 0.67
CEACAM3-203ENST00000415495 DBPQ10586 325 aaPredicted RBP19.22■□□□□ 0.67
CEACAM3-203ENST00000415495 IRF3Q14653 427 aa19.22■□□□□ 0.67
CEACAM3-203ENST00000415495 NADK2Q4G0N4 442 aa19.22■□□□□ 0.67
CEACAM3-203ENST00000415495 NIPAL3Q6P499 406 aa19.22■□□□□ 0.67
CEACAM3-203ENST00000415495 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.22■□□□□ 0.67
CEACAM3-203ENST00000415495 KDM8Q8N371 416 aa19.22■□□□□ 0.67
CEACAM3-203ENST00000415495 TMEM99Q8N816 258 aa19.22■□□□□ 0.67
CEACAM3-203ENST00000415495 LSM14AQ8ND56 463 aaKnown RBP19.22■□□□□ 0.67
CEACAM3-203ENST00000415495 ADPRHL1Q8NDY3 354 aa19.22■□□□□ 0.67
CEACAM3-203ENST00000415495 SDR9C7Q8NEX9 313 aa19.22■□□□□ 0.67
CEACAM3-203ENST00000415495 RFKQ969G6 155 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms