RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 CALML5Q9NZT1 146 aa16.76■□□□□ 0.27
UBXN4-202ENST00000415164 ARFGEF3Q5TH69 2177 aa16.76■□□□□ 0.27
UBXN4-202ENST00000415164 SLC43A1O75387 559 aa16.75■□□□□ 0.27
UBXN4-202ENST00000415164 TFPTP0C1Z6 253 aa16.75■□□□□ 0.27
UBXN4-202ENST00000415164 PNMTP11086 282 aa16.75■□□□□ 0.27
UBXN4-202ENST00000415164 IFNGR1P15260 489 aa16.75■□□□□ 0.27
UBXN4-202ENST00000415164 ZNF43P17038 809 aa16.75■□□□□ 0.27
UBXN4-202ENST00000415164 ITGA2P17301 1181 aa16.75■□□□□ 0.27
UBXN4-202ENST00000415164 HOXC5Q00444 222 aa16.75■□□□□ 0.27
UBXN4-202ENST00000415164 HGFACQ04756 655 aa16.75■□□□□ 0.27
UBXN4-202ENST00000415164 C1DQ13901 141 aaKnown RBP16.75■□□□□ 0.27
UBXN4-202ENST00000415164 NXNQ6DKJ4 435 aa16.75■□□□□ 0.27
UBXN4-202ENST00000415164 KRT80Q6KB66 452 aa16.75■□□□□ 0.27
UBXN4-202ENST00000415164 SERPINA11Q86U17 422 aa16.75■□□□□ 0.27
UBXN4-202ENST00000415164 CLIP4Q8N3C7 705 aa16.75■□□□□ 0.27
UBXN4-202ENST00000415164 NEU4Q8WWR8 484 aaPredicted RBP16.75■□□□□ 0.27
UBXN4-202ENST00000415164 NELFAQ9H3P2 528 aa16.75■□□□□ 0.27
UBXN4-202ENST00000415164 SEC14L4Q9UDX3 406 aa16.75■□□□□ 0.27
UBXN4-202ENST00000415164 TMEFF2Q9UIK5 374 aaPredicted RBP16.75■□□□□ 0.27
UBXN4-202ENST00000415164 TMEM247A6NEH6 219 aa16.74■□□□□ 0.27
UBXN4-202ENST00000415164 LYNX1G3V0Z9 82 aa16.74■□□□□ 0.27
UBXN4-202ENST00000415164 ADRA2AP08913 450 aa16.74■□□□□ 0.27
UBXN4-202ENST00000415164 LYNX1P0DP58 116 aa16.74■□□□□ 0.27
UBXN4-202ENST00000415164 CBLP22681 906 aa16.74■□□□□ 0.27
UBXN4-202ENST00000415164 PAX7P23759 505 aa16.74■□□□□ 0.27
UBXN4-202ENST00000415164 SH3BGRP55822 239 aaPredicted RBP16.74■□□□□ 0.27
UBXN4-202ENST00000415164 DSTNP60981 165 aa16.74■□□□□ 0.27
UBXN4-202ENST00000415164 LRRC74AQ0VAA2 488 aa16.74■□□□□ 0.27
UBXN4-202ENST00000415164 SNTB2Q13425 540 aaKnown RBP16.74■□□□□ 0.27
UBXN4-202ENST00000415164 TRIP10Q15642 601 aa16.74■□□□□ 0.27
UBXN4-202ENST00000415164 MAPK11Q15759 364 aa16.74■□□□□ 0.27
UBXN4-202ENST00000415164 CDK20Q8IZL9 346 aa16.74■□□□□ 0.27
UBXN4-202ENST00000415164 KIRREL3Q8IZU9 778 aa16.74■□□□□ 0.27
UBXN4-202ENST00000415164 LINC01356Q8N9X3 169 aa16.74■□□□□ 0.27
UBXN4-202ENST00000415164 NUP37Q8NFH4 326 aa16.74■□□□□ 0.27
UBXN4-202ENST00000415164 MAGEE2Q8TD90 523 aaPredicted RBP16.74■□□□□ 0.27
UBXN4-202ENST00000415164 BOD1Q96IK1 185 aa16.74■□□□□ 0.27
UBXN4-202ENST00000415164 ANKRD27Q96NW4 1050 aa16.74■□□□□ 0.27
UBXN4-202ENST00000415164 LINC00470Q9BZP3 86 aa16.74■□□□□ 0.27
UBXN4-202ENST00000415164 ARMC7Q9H6L4 198 aa16.74■□□□□ 0.27
UBXN4-202ENST00000415164 WDR55Q9H6Y2 383 aaPredicted RBP16.74■□□□□ 0.27
UBXN4-202ENST00000415164 CRLF2Q9HC73 371 aa16.74■□□□□ 0.27
UBXN4-202ENST00000415164 CRNNQ9UBG3 495 aaPredicted RBP16.74■□□□□ 0.27
UBXN4-202ENST00000415164 RPS6KB2Q9UBS0 482 aa16.74■□□□□ 0.27
UBXN4-202ENST00000415164 ZNF232Q9UNY5 417 aa16.74■□□□□ 0.27
UBXN4-202ENST00000415164 PCDHB14Q9Y5E9 798 aa16.74■□□□□ 0.27
UBXN4-202ENST00000415164 A0A096LPI6 279 aa16.73■□□□□ 0.27
UBXN4-202ENST00000415164 IGLV1-44P01699 117 aa16.73■□□□□ 0.27
UBXN4-202ENST00000415164 KITP10721 976 aa16.73■□□□□ 0.27
UBXN4-202ENST00000415164 CBR1P16152 277 aa16.73■□□□□ 0.27
UBXN4-202ENST00000415164 EPHA3P29320 983 aa16.73■□□□□ 0.27
UBXN4-202ENST00000415164 DAG1Q14118 895 aa16.73■□□□□ 0.27
UBXN4-202ENST00000415164 CEACAM16Q2WEN9 425 aa16.73■□□□□ 0.27
UBXN4-202ENST00000415164 CARD17Q5XLA6 110 aa16.73■□□□□ 0.27
UBXN4-202ENST00000415164 OGFOD2Q6N063 350 aa16.73■□□□□ 0.27
UBXN4-202ENST00000415164 MDP1Q86V88 176 aa16.73■□□□□ 0.27
UBXN4-202ENST00000415164 RFLNBQ8N5W9 214 aa16.73■□□□□ 0.27
UBXN4-202ENST00000415164 RNF217Q8TC41 542 aa16.73■□□□□ 0.27
UBXN4-202ENST00000415164 STK35Q8TDR2 534 aa16.73■□□□□ 0.27
UBXN4-202ENST00000415164 UBASH3BQ8TF42 649 aa16.73■□□□□ 0.27
UBXN4-202ENST00000415164 CKAP2Q8WWK9 683 aa16.73■□□□□ 0.27
UBXN4-202ENST00000415164 TRIM44Q96DX7 344 aaPredicted RBP16.73■□□□□ 0.27
UBXN4-202ENST00000415164 TMEM19Q96HH6 336 aa16.73■□□□□ 0.27
UBXN4-202ENST00000415164 ZNF317Q96PQ6 595 aaPredicted RBP16.73■□□□□ 0.27
UBXN4-202ENST00000415164 OCEL1Q9H607 264 aa16.73■□□□□ 0.27
UBXN4-202ENST00000415164 NARFLQ9H6Q4 476 aa16.73■□□□□ 0.27
UBXN4-202ENST00000415164 MOV10Q9HCE1 1003 aaKnown RBP16.73■□□□□ 0.27
UBXN4-202ENST00000415164 SLC6A13Q9NSD5 602 aa16.73■□□□□ 0.27
UBXN4-202ENST00000415164 FBXO9Q9UK97 447 aaPredicted RBP16.73■□□□□ 0.27
UBXN4-202ENST00000415164 IGHV2OR16-5A0A0B4J2B6 119 aa16.72■□□□□ 0.27
UBXN4-202ENST00000415164 TMEM229AB2RXF0 380 aa16.72■□□□□ 0.27
UBXN4-202ENST00000415164 SDHDO14521 159 aa16.72■□□□□ 0.27
UBXN4-202ENST00000415164 IGKV3-15P01624 115 aa16.72■□□□□ 0.27
UBXN4-202ENST00000415164 BST1Q10588 318 aa16.72■□□□□ 0.27
UBXN4-202ENST00000415164 C3orf36Q3SXR2 165 aa16.72■□□□□ 0.27
UBXN4-202ENST00000415164 GTDC1Q4AE62 458 aa16.72■□□□□ 0.27
UBXN4-202ENST00000415164 ZNF311Q5JNZ3 666 aa16.72■□□□□ 0.27
UBXN4-202ENST00000415164 RNF220Q5VTB9 566 aa16.72■□□□□ 0.27
UBXN4-202ENST00000415164 ANKRD42Q8N9B4 389 aa16.72■□□□□ 0.27
UBXN4-202ENST00000415164 MFSD8Q8NHS3 518 aa16.72■□□□□ 0.27
UBXN4-202ENST00000415164 SLC38A5Q8WUX1 472 aa16.72■□□□□ 0.27
UBXN4-202ENST00000415164 KTI12Q96EK9 354 aaPredicted RBP16.72■□□□□ 0.27
UBXN4-202ENST00000415164 DOK1Q99704 481 aa16.72■□□□□ 0.27
UBXN4-202ENST00000415164 SPATA9Q9BWV2 254 aa16.72■□□□□ 0.27
UBXN4-202ENST00000415164 ZNF442Q9H7R0 627 aa16.72■□□□□ 0.27
UBXN4-202ENST00000415164 GPR35Q9HC97 309 aa16.72■□□□□ 0.27
UBXN4-202ENST00000415164 M0R3G1 203 aa16.71■□□□□ 0.27
UBXN4-202ENST00000415164 TM9SF1O15321 606 aa16.71■□□□□ 0.27
UBXN4-202ENST00000415164 LILRA1O75019 489 aa16.71■□□□□ 0.27
UBXN4-202ENST00000415164 CD79AP11912 226 aa16.71■□□□□ 0.27
UBXN4-202ENST00000415164 HOXB1P14653 301 aaPredicted RBP16.71■□□□□ 0.27
UBXN4-202ENST00000415164 TCN1P20061 433 aaPredicted RBP16.71■□□□□ 0.27
UBXN4-202ENST00000415164 GIFP27352 417 aa16.71■□□□□ 0.27
UBXN4-202ENST00000415164 ARR3P36575 388 aa16.71■□□□□ 0.27
UBXN4-202ENST00000415164 C6orf10Q5SRN2 563 aa16.71■□□□□ 0.27
UBXN4-202ENST00000415164 C12orf54Q6X4T0 127 aa16.71■□□□□ 0.27
UBXN4-202ENST00000415164 ZNF786Q8N393 782 aa16.71■□□□□ 0.27
UBXN4-202ENST00000415164 AENQ8WTP8 325 aaKnown RBP16.71■□□□□ 0.27
UBXN4-202ENST00000415164 HPS1Q92902 700 aa16.71■□□□□ 0.27
UBXN4-202ENST00000415164 ZNF837Q96EG3 531 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms