RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 BGLAPP02818 100 aa13□□□□□ -0.33
CHD1-202ENST00000414220 HSD17B1P14061 328 aa13□□□□□ -0.33
CHD1-202ENST00000414220 TNFRSF1BP20333 461 aa13□□□□□ -0.33
CHD1-202ENST00000414220 DNAJA1P31689 397 aaKnown RBP13□□□□□ -0.33
CHD1-202ENST00000414220 CCKARP32238 428 aa13□□□□□ -0.33
CHD1-202ENST00000414220 CLDN17P56750 224 aa13□□□□□ -0.33
CHD1-202ENST00000414220 SLC25A3Q00325 362 aa13□□□□□ -0.33
CHD1-202ENST00000414220 PIN1Q13526 163 aaPredicted RBP13□□□□□ -0.33
CHD1-202ENST00000414220 STK11Q15831 433 aa13□□□□□ -0.33
CHD1-202ENST00000414220 TIMM23BQ5SRD1 257 aa13□□□□□ -0.33
CHD1-202ENST00000414220 C1QTNF12Q5T7M4 302 aa13□□□□□ -0.33
CHD1-202ENST00000414220 ALKBH2Q6NS38 261 aa13□□□□□ -0.33
CHD1-202ENST00000414220 NIPAL3Q6P499 406 aa13□□□□□ -0.33
CHD1-202ENST00000414220 RRM2BQ7LG56 351 aa13□□□□□ -0.33
CHD1-202ENST00000414220 CDC20BQ86Y33 519 aa13□□□□□ -0.33
CHD1-202ENST00000414220 WFDC8Q8IUA0 241 aa13□□□□□ -0.33
CHD1-202ENST00000414220 CDK20Q8IZL9 346 aa13□□□□□ -0.33
CHD1-202ENST00000414220 RNF148Q8N7C7 305 aa13□□□□□ -0.33
CHD1-202ENST00000414220 OR5J2Q8NH18 312 aa13□□□□□ -0.33
CHD1-202ENST00000414220 TMEM239Q8WW34 195 aa13□□□□□ -0.33
CHD1-202ENST00000414220 PIK3IP1Q96FE7 263 aa13□□□□□ -0.33
CHD1-202ENST00000414220 PRRC1Q96M27 445 aa13□□□□□ -0.33
CHD1-202ENST00000414220 ZNF385AQ96PM9 386 aaKnown RBP13□□□□□ -0.33
CHD1-202ENST00000414220 ZNF229Q9UJW7 825 aa13□□□□□ -0.33
CHD1-202ENST00000414220 RCE1Q9Y256 329 aa13□□□□□ -0.33
CHD1-202ENST00000414220 MED31Q9Y3C7 131 aa13□□□□□ -0.33
CHD1-202ENST00000414220 NOX1Q9Y5S8 564 aa13□□□□□ -0.33
CHD1-202ENST00000414220 ADGRG4Q8IZF6 3080 aa12.99□□□□□ -0.33
CHD1-202ENST00000414220 ZNF726A6NNF4 738 aa12.99□□□□□ -0.33
CHD1-202ENST00000414220 ZNF587BE7ETH6 402 aa12.99□□□□□ -0.33
CHD1-202ENST00000414220 KPNA4O00629 521 aaPredicted RBP12.99□□□□□ -0.33
CHD1-202ENST00000414220 SLC43A1O75387 559 aa12.99□□□□□ -0.33
CHD1-202ENST00000414220 CH25HO95992 272 aa12.99□□□□□ -0.33
CHD1-202ENST00000414220 MT-ND1P03886 318 aa12.99□□□□□ -0.33
CHD1-202ENST00000414220 HRGP04196 525 aa12.99□□□□□ -0.33
CHD1-202ENST00000414220 ADORA3P0DMS8 318 aa12.99□□□□□ -0.33
CHD1-202ENST00000414220 NCK1P16333 377 aa12.99□□□□□ -0.33
CHD1-202ENST00000414220 ITGA2P17301 1181 aa12.99□□□□□ -0.33
CHD1-202ENST00000414220 TCN1P20061 433 aaPredicted RBP12.99□□□□□ -0.33
CHD1-202ENST00000414220 COX5AP20674 150 aa12.99□□□□□ -0.33
CHD1-202ENST00000414220 IGHV1-2P23083 117 aa12.99□□□□□ -0.33
CHD1-202ENST00000414220 PAX7P23759 505 aa12.99□□□□□ -0.33
CHD1-202ENST00000414220 P2RY4P51582 365 aa12.99□□□□□ -0.33
CHD1-202ENST00000414220 PUDPQ08623 228 aa12.99□□□□□ -0.33
CHD1-202ENST00000414220 KLHL24Q6TFL4 600 aa12.99□□□□□ -0.33
CHD1-202ENST00000414220 PXKQ7Z7A4 578 aa12.99□□□□□ -0.33
CHD1-202ENST00000414220 CDH24Q86UP0 819 aa12.99□□□□□ -0.33
CHD1-202ENST00000414220 KDM8Q8N371 416 aa12.99□□□□□ -0.33
CHD1-202ENST00000414220 GPR137CQ8N3F9 429 aa12.99□□□□□ -0.33
CHD1-202ENST00000414220 ZNF433Q8N7K0 673 aaPredicted RBP12.99□□□□□ -0.33
CHD1-202ENST00000414220 ZIC4Q8N9L1 334 aa12.99□□□□□ -0.33
CHD1-202ENST00000414220 PIK3C3Q8NEB9 887 aa12.99□□□□□ -0.33
CHD1-202ENST00000414220 MCUR1Q96AQ8 359 aa12.99□□□□□ -0.33
CHD1-202ENST00000414220 HSH2DQ96JZ2 352 aa12.99□□□□□ -0.33
CHD1-202ENST00000414220 NSMCE2Q96MF7 247 aa12.99□□□□□ -0.33
CHD1-202ENST00000414220 ESRP2Q9H6T0 727 aaKnown RBP12.99□□□□□ -0.33
CHD1-202ENST00000414220 GORASP2Q9H8Y8 452 aa12.99□□□□□ -0.33
CHD1-202ENST00000414220 B3GAT2Q9NPZ5 323 aa12.99□□□□□ -0.33
CHD1-202ENST00000414220 IGF2P01344 180 aa12.98□□□□□ -0.33
CHD1-202ENST00000414220 MPGP29372 298 aa12.98□□□□□ -0.33
CHD1-202ENST00000414220 KRTAP10-9P60411 292 aa12.98□□□□□ -0.33
CHD1-202ENST00000414220 TRAM2Q15035 370 aa12.98□□□□□ -0.33
CHD1-202ENST00000414220 PPA1Q15181 289 aa12.98□□□□□ -0.33
CHD1-202ENST00000414220 ZNF74Q16587 644 aa12.98□□□□□ -0.33
CHD1-202ENST00000414220 TSPO2Q5TGU0 170 aa12.98□□□□□ -0.33
CHD1-202ENST00000414220 HMBOX1Q6NT76 420 aa12.98□□□□□ -0.33
CHD1-202ENST00000414220 NANOGNBQ7Z5D8 188 aa12.98□□□□□ -0.33
CHD1-202ENST00000414220 VTCN1Q7Z7D3 282 aa12.98□□□□□ -0.33
CHD1-202ENST00000414220 EPHX4Q8IUS5 362 aa12.98□□□□□ -0.33
CHD1-202ENST00000414220 C17orf78Q8N4C9 275 aa12.98□□□□□ -0.33
CHD1-202ENST00000414220 C1orf162Q8NEQ5 155 aaPredicted RBP12.98□□□□□ -0.33
CHD1-202ENST00000414220 ANKK1Q8NFD2 765 aa12.98□□□□□ -0.33
CHD1-202ENST00000414220 POP5Q969H6 163 aaKnown RBP12.98□□□□□ -0.33
CHD1-202ENST00000414220 SGTBQ96EQ0 304 aa12.98□□□□□ -0.33
CHD1-202ENST00000414220 ZNF426Q9BUY5 554 aa12.98□□□□□ -0.33
CHD1-202ENST00000414220 LINC00470Q9BZP3 86 aa12.98□□□□□ -0.33
CHD1-202ENST00000414220 AMBRA1Q9C0C7 1298 aa12.98□□□□□ -0.33
CHD1-202ENST00000414220 SLC7A10Q9NS82 523 aa12.98□□□□□ -0.33
CHD1-202ENST00000414220 DCAF13Q9NV06 445 aaKnown RBP12.98□□□□□ -0.33
CHD1-202ENST00000414220 GMPR2Q9P2T1 348 aaKnown RBP12.98□□□□□ -0.33
CHD1-202ENST00000414220 MAGED1Q9Y5V3 778 aaPredicted RBP12.98□□□□□ -0.33
CHD1-202ENST00000414220 SNX13Q9Y5W8 968 aa12.98□□□□□ -0.33
CHD1-202ENST00000414220 OR5H1A6NKK0 313 aa12.97□□□□□ -0.33
CHD1-202ENST00000414220 ENO4A6NNW6 628 aa12.97□□□□□ -0.33
CHD1-202ENST00000414220 MS4A18H0YCH9 400 aa12.97□□□□□ -0.33
CHD1-202ENST00000414220 PLPP3O14495 311 aa12.97□□□□□ -0.33
CHD1-202ENST00000414220 RNF13O43567 381 aa12.97□□□□□ -0.33
CHD1-202ENST00000414220 RAD51DO75771 328 aa12.97□□□□□ -0.33
CHD1-202ENST00000414220 LYPD3O95274 346 aa12.97□□□□□ -0.33
CHD1-202ENST00000414220 THY1P04216 161 aa12.97□□□□□ -0.33
CHD1-202ENST00000414220 FUT1P19526 365 aa12.97□□□□□ -0.33
CHD1-202ENST00000414220 PTNP21246 168 aa12.97□□□□□ -0.33
CHD1-202ENST00000414220 DNASE1P24855 282 aa12.97□□□□□ -0.33
CHD1-202ENST00000414220 SELENOPP49908 381 aa12.97□□□□□ -0.33
CHD1-202ENST00000414220 POU3F1Q03052 451 aaPredicted RBP12.97□□□□□ -0.33
CHD1-202ENST00000414220 LTBQ06643 244 aa12.97□□□□□ -0.33
CHD1-202ENST00000414220 FOXD4Q12950 439 aaPredicted RBP12.97□□□□□ -0.33
CHD1-202ENST00000414220 TAF11Q15544 211 aa12.97□□□□□ -0.33
CHD1-202ENST00000414220 TSC22D1Q15714 1073 aa12.97□□□□□ -0.33
CHD1-202ENST00000414220 TAB1Q15750 504 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms