RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 SFXN5Q8TD22 340 aa8.28□□□□□ -1.08
RFFL-203ENST00000413582 ZNF418Q8TF45 676 aaPredicted RBP8.28□□□□□ -1.08
RFFL-203ENST00000413582 NEU4Q8WWR8 484 aaPredicted RBP8.28□□□□□ -1.08
RFFL-203ENST00000413582 TMEM45BQ96B21 275 aa8.28□□□□□ -1.08
RFFL-203ENST00000413582 ROPN1LQ96C74 230 aa8.28□□□□□ -1.08
RFFL-203ENST00000413582 COQ8BQ96D53 544 aa8.28□□□□□ -1.08
RFFL-203ENST00000413582 SPDL1Q96EA4 605 aa8.28□□□□□ -1.08
RFFL-203ENST00000413582 OR7D2Q96RA2 312 aa8.28□□□□□ -1.08
RFFL-203ENST00000413582 KCNS3Q9BQ31 491 aa8.28□□□□□ -1.08
RFFL-203ENST00000413582 ZNF350Q9GZX5 532 aa8.28□□□□□ -1.08
RFFL-203ENST00000413582 MMADHCQ9H3L0 296 aaPredicted RBP8.28□□□□□ -1.08
RFFL-203ENST00000413582 SERHL2Q9H4I8 314 aa8.28□□□□□ -1.08
RFFL-203ENST00000413582 SEC61A2Q9H9S3 476 aa8.28□□□□□ -1.08
RFFL-203ENST00000413582 OBP2BQ9NPH6 170 aa8.28□□□□□ -1.08
RFFL-203ENST00000413582 SLC52A3Q9NQ40 469 aa8.28□□□□□ -1.08
RFFL-203ENST00000413582 ATAD3AQ9NVI7 634 aa8.28□□□□□ -1.08
RFFL-203ENST00000413582 GID8Q9NWU2 228 aa8.28□□□□□ -1.08
RFFL-203ENST00000413582 LEF1Q9UJU2 399 aaPredicted RBP8.28□□□□□ -1.08
RFFL-203ENST00000413582 SPEF1Q9Y4P9 236 aa8.28□□□□□ -1.08
RFFL-203ENST00000413582 PCDHB14Q9Y5E9 798 aa8.28□□□□□ -1.08
RFFL-203ENST00000413582 PRKDCP78527 4128 aaKnown RBP8.28□□□□□ -1.08
RFFL-203ENST00000413582 LOC100653049A0A140TA62 436 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 hCG_2039718K7EN88 272 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 UGT2B17O75795 530 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 KRT34O76011 436 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 C6orf47O95873 294 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 IGLV1-44P01699 117 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 ERCC1P07992 297 aaPredicted RBP8.27□□□□□ -1.09
RFFL-203ENST00000413582 CECR9P0C854 216 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 LAMP1P11279 417 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 IFNGR1P15260 489 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 CDH2P19022 906 aaPredicted RBP8.27□□□□□ -1.09
RFFL-203ENST00000413582 IL12AP29459 219 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 CALCRP30988 508 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 S100A3P33764 101 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 PGM1P36871 562 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 SLC1A3P43003 542 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 NME5P56597 212 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 OR2B6P58173 313 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 RPS26P62854 115 aaKnown RBP8.27□□□□□ -1.09
RFFL-203ENST00000413582 PLAURQ03405 335 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 HGFACQ04756 655 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 SCGB2A2Q13296 93 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 GPR68Q15743 365 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 C3orf36Q3SXR2 165 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 TBRG1Q3YBR2 411 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 MMEL1Q495T6 779 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 SPDYE7PQ495Y7 208 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 DNAL1Q4LDG9 190 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 AWAT1Q58HT5 328 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 ANXA8L1Q5VT79 327 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 USP43Q70EL4 1123 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 EIF3MQ7L2H7 374 aaKnown RBP8.27□□□□□ -1.09
RFFL-203ENST00000413582 OLIG3Q7RTU3 272 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 GRINAQ7Z429 371 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 PEG10Q86TG7 708 aaKnown RBP8.27□□□□□ -1.09
RFFL-203ENST00000413582 SNX32Q86XE0 403 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 SVOPLQ8N434 492 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 DPP10Q8N608 796 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 NUP37Q8NFH4 326 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 UBASH3BQ8TF42 649 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 WDR60Q8WVS4 1066 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 OR5P2Q8WZ92 322 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 TMEM186Q96B77 213 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 SLC7A6OSQ96CW6 309 aaPredicted RBP8.27□□□□□ -1.09
RFFL-203ENST00000413582 TEX37Q96LM6 180 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 DOK1Q99704 481 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 HOPXQ9BPY8 73 aaPredicted RBP8.27□□□□□ -1.09
RFFL-203ENST00000413582 BTBD10Q9BSF8 475 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 RBM4Q9BWF3 364 aaKnown RBP8.27□□□□□ -1.09
RFFL-203ENST00000413582 ZNF442Q9H7R0 627 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 RMND5AQ9H871 391 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 PARPBPQ9NWS1 579 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 HIF1ANQ9NWT6 349 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 TMEM181Q9P2C4 612 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 CRNNQ9UBG3 495 aaPredicted RBP8.27□□□□□ -1.09
RFFL-203ENST00000413582 FBXO9Q9UK97 447 aaPredicted RBP8.27□□□□□ -1.09
RFFL-203ENST00000413582 NOTCH1P46531 2555 aa8.27□□□□□ -1.09
RFFL-203ENST00000413582 ARPC4-TTLL3A0A0A6YYG9 625 aa8.26□□□□□ -1.09
RFFL-203ENST00000413582 PRSS51A0A1B0GVH4 220 aa8.26□□□□□ -1.09
RFFL-203ENST00000413582 B2RBV5 119 aa8.26□□□□□ -1.09
RFFL-203ENST00000413582 LYNX1G3V0Z9 82 aa8.26□□□□□ -1.09
RFFL-203ENST00000413582 TRIM77I1YAP6 450 aa8.26□□□□□ -1.09
RFFL-203ENST00000413582 ANGPT2O15123 496 aa8.26□□□□□ -1.09
RFFL-203ENST00000413582 TMPRSS2O15393 492 aa8.26□□□□□ -1.09
RFFL-203ENST00000413582 FCMRO60667 390 aa8.26□□□□□ -1.09
RFFL-203ENST00000413582 EIF1BO60739 113 aaKnown RBP8.26□□□□□ -1.09
RFFL-203ENST00000413582 SCN2BO60939 215 aa8.26□□□□□ -1.09
RFFL-203ENST00000413582 STX11O75558 287 aa8.26□□□□□ -1.09
RFFL-203ENST00000413582 LGI1O95970 557 aa8.26□□□□□ -1.09
RFFL-203ENST00000413582 AK1P00568 194 aa8.26□□□□□ -1.09
RFFL-203ENST00000413582 MSMBP08118 114 aa8.26□□□□□ -1.09
RFFL-203ENST00000413582 LYNX1P0DP58 116 aa8.26□□□□□ -1.09
RFFL-203ENST00000413582 IMPDH2P12268 514 aa8.26□□□□□ -1.09
RFFL-203ENST00000413582 EPHA1P21709 976 aa8.26□□□□□ -1.09
RFFL-203ENST00000413582 CLK1P49759 484 aaKnown RBP8.26□□□□□ -1.09
RFFL-203ENST00000413582 MAPK14Q16539 360 aa8.26□□□□□ -1.09
RFFL-203ENST00000413582 SPATS1Q496A3 300 aa8.26□□□□□ -1.09
RFFL-203ENST00000413582 ANKRD16Q6P6B7 361 aa8.26□□□□□ -1.09
RFFL-203ENST00000413582 SHQ1Q6PI26 577 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms